RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 TGFB1I1O43294 461 aa18.67■□□□□ 0.58
RXRB-201ENST00000374680 FOSP01100 380 aaPredicted RBP18.67■□□□□ 0.58
RXRB-201ENST00000374680 TUBBP07437 444 aa18.67■□□□□ 0.58
RXRB-201ENST00000374680 POLR2MP0CAP2 368 aa18.67■□□□□ 0.58
RXRB-201ENST00000374680 ODR4Q5SWX8 454 aa18.67■□□□□ 0.58
RXRB-201ENST00000374680 AFAP1L1Q8TED9 768 aa18.67■□□□□ 0.58
RXRB-201ENST00000374680 IQCDQ96DY2 449 aa18.67■□□□□ 0.58
RXRB-201ENST00000374680 GMCL1Q96IK5 515 aa18.67■□□□□ 0.58
RXRB-201ENST00000374680 FAM20AQ96MK3 541 aa18.67■□□□□ 0.58
RXRB-201ENST00000374680 CENPHQ9H3R5 247 aa18.67■□□□□ 0.58
RXRB-201ENST00000374680 FAM184BQ9ULE4 1060 aa18.67■□□□□ 0.58
RXRB-201ENST00000374680 TARSL2A2RTX5 802 aaKnown RBP18.66■□□□□ 0.58
RXRB-201ENST00000374680 PJA2O43164 708 aa18.66■□□□□ 0.58
RXRB-201ENST00000374680 MCM3P25205 808 aa18.66■□□□□ 0.58
RXRB-201ENST00000374680 ACTN2P35609 894 aa18.66■□□□□ 0.58
RXRB-201ENST00000374680 DLGAP5Q15398 846 aa18.66■□□□□ 0.58
RXRB-201ENST00000374680 DDX42Q86XP3 938 aaKnown RBP eCLIP18.66■□□□□ 0.58
RXRB-201ENST00000374680 SYCP3Q8IZU3 236 aa18.66■□□□□ 0.58
RXRB-201ENST00000374680 MMGT1Q8N4V1 131 aa18.66■□□□□ 0.58
RXRB-201ENST00000374680 MBOAT7Q96N66 472 aa18.66■□□□□ 0.58
RXRB-201ENST00000374680 ZNF577Q9BSK1 485 aa18.66■□□□□ 0.58
RXRB-201ENST00000374680 IGLV3-22A0A075B6J6 115 aa18.66■□□□□ 0.58
RXRB-201ENST00000374680 SHTN1A0MZ66 631 aa18.66■□□□□ 0.58
RXRB-201ENST00000374680 SORBS3O60504 671 aa18.66■□□□□ 0.58
RXRB-201ENST00000374680 EDRF1Q3B7T1 1238 aa18.66■□□□□ 0.58
RXRB-201ENST00000374680 FAM186BQ8IYM0 893 aa18.66■□□□□ 0.58
RXRB-201ENST00000374680 SH2D3CQ8N5H7 860 aa18.66■□□□□ 0.58
RXRB-201ENST00000374680 SLC35C1Q96A29 364 aa18.66■□□□□ 0.58
RXRB-201ENST00000374680 ARHGEF10LQ9HCE6 1279 aa18.66■□□□□ 0.58
RXRB-201ENST00000374680 PITPNM2Q9BZ72 1349 aa18.65■□□□□ 0.58
RXRB-201ENST00000374680 FRMD3A2A2Y4 597 aa18.65■□□□□ 0.58
RXRB-201ENST00000374680 EYA4O95677 639 aa18.65■□□□□ 0.58
RXRB-201ENST00000374680 KRT14P02533 472 aa18.65■□□□□ 0.58
RXRB-201ENST00000374680 GBP6Q6ZN66 633 aa18.65■□□□□ 0.58
RXRB-201ENST00000374680 FAM178BQ8IXR5 827 aa18.65■□□□□ 0.58
RXRB-201ENST00000374680 LARGE2Q8N3Y3 721 aa18.65■□□□□ 0.58
RXRB-201ENST00000374680 GMCL1P1Q8NEA9 526 aa18.65■□□□□ 0.58
RXRB-201ENST00000374680 TAF4BQ92750 862 aa18.65■□□□□ 0.58
RXRB-201ENST00000374680 ARL8AQ96BM9 186 aa18.65■□□□□ 0.58
RXRB-201ENST00000374680 LUC7LQ9NQ29 371 aaKnown RBP18.65■□□□□ 0.58
RXRB-201ENST00000374680 TRIM66O15016 1216 aa18.65■□□□□ 0.58
RXRB-201ENST00000374680 HLTFQ14527 1009 aaKnown RBP eCLIP18.65■□□□□ 0.58
RXRB-201ENST00000374680 GLYCTKQ8IVS8 523 aa18.65■□□□□ 0.58
RXRB-201ENST00000374680 HOOK2Q96ED9 719 aa18.65■□□□□ 0.58
RXRB-201ENST00000374680 ZC3H4Q9UPT8 1303 aaKnown RBP18.64■□□□□ 0.58
RXRB-201ENST00000374680 USP8P40818 1118 aa18.64■□□□□ 0.58
RXRB-201ENST00000374680 PRPF4BQ13523 1007 aaKnown RBP18.64■□□□□ 0.58
RXRB-201ENST00000374680 LLGL1Q15334 1064 aa18.64■□□□□ 0.58
RXRB-201ENST00000374680 RPS6KA1Q15418 735 aa18.64■□□□□ 0.58
RXRB-201ENST00000374680 HSD17B14Q9BPX1 270 aa18.64■□□□□ 0.58
RXRB-201ENST00000374680 UNC45AQ9H3U1 944 aa18.64■□□□□ 0.58
RXRB-201ENST00000374680 TYW1Q9NV66 732 aaKnown RBP18.64■□□□□ 0.58
RXRB-201ENST00000374680 AIPL1Q9NZN9 384 aa18.64■□□□□ 0.58
RXRB-201ENST00000374680 NAGPAQ9UK23 515 aa18.64■□□□□ 0.58
RXRB-201ENST00000374680 TRAF3IP3Q9Y228 551 aa18.64■□□□□ 0.58
RXRB-201ENST00000374680 ANKRD31Q8N7Z5 1873 aa18.64■□□□□ 0.57
RXRB-201ENST00000374680 GOLGA6CA6NDK9 693 aa18.64■□□□□ 0.57
RXRB-201ENST00000374680 PDXKO00764 312 aa18.64■□□□□ 0.57
RXRB-201ENST00000374680 GOLGA6DP0CG33 693 aa18.64■□□□□ 0.57
RXRB-201ENST00000374680 ATP1A2P50993 1020 aa18.64■□□□□ 0.57
RXRB-201ENST00000374680 EPHA7Q15375 998 aa18.64■□□□□ 0.57
RXRB-201ENST00000374680 FRMD5Q7Z6J6 570 aa18.64■□□□□ 0.57
RXRB-201ENST00000374680 ZSWIM2Q8NEG5 633 aa18.64■□□□□ 0.57
RXRB-201ENST00000374680 AENQ8WTP8 325 aaKnown RBP18.64■□□□□ 0.57
RXRB-201ENST00000374680 EDEM3Q9BZQ6 932 aa18.64■□□□□ 0.57
RXRB-201ENST00000374680 OSGEPQ9NPF4 335 aa18.64■□□□□ 0.57
RXRB-201ENST00000374680 MED4Q9NPJ6 270 aa18.64■□□□□ 0.57
RXRB-201ENST00000374680 GOLGA6AQ9NYA3 693 aa18.64■□□□□ 0.57
RXRB-201ENST00000374680 RPL13P26373 211 aaKnown RBP18.63■□□□□ 0.57
RXRB-201ENST00000374680 CBWD6Q4V339 395 aa18.63■□□□□ 0.57
RXRB-201ENST00000374680 CBWD3Q5JTY5 395 aa18.63■□□□□ 0.57
RXRB-201ENST00000374680 CBWD5Q5RIA9 395 aa18.63■□□□□ 0.57
RXRB-201ENST00000374680 EPM2AIP1Q7L775 607 aaPredicted RBP18.63■□□□□ 0.57
RXRB-201ENST00000374680 C10orf67Q8IYJ2 551 aa18.63■□□□□ 0.57
RXRB-201ENST00000374680 OGFOD1Q8N543 542 aa18.63■□□□□ 0.57
RXRB-201ENST00000374680 NUCKS1Q9H1E3 243 aaKnown RBP18.63■□□□□ 0.57
RXRB-201ENST00000374680 ZNF70Q9UC06 446 aaPredicted RBP18.63■□□□□ 0.57
RXRB-201ENST00000374680 COPB2P35606 906 aa18.63■□□□□ 0.57
RXRB-201ENST00000374680 LDHDQ86WU2 507 aa18.63■□□□□ 0.57
RXRB-201ENST00000374680 RNF10Q8N5U6 811 aaKnown RBP18.63■□□□□ 0.57
RXRB-201ENST00000374680 CCDC43Q96MW1 224 aaKnown RBP18.63■□□□□ 0.57
RXRB-201ENST00000374680 RUFY1Q96T51 708 aa18.63■□□□□ 0.57
RXRB-201ENST00000374680 TRIM31Q9BZY9 425 aa18.63■□□□□ 0.57
RXRB-201ENST00000374680 PARVGQ9HBI0 331 aa18.63■□□□□ 0.57
RXRB-201ENST00000374680 ARFGEF1Q9Y6D6 1849 aa18.63■□□□□ 0.57
RXRB-201ENST00000374680 GRIPAP1Q4V328 841 aa18.63■□□□□ 0.57
RXRB-201ENST00000374680 CEP55Q53EZ4 464 aa18.63■□□□□ 0.57
RXRB-201ENST00000374680 IL31RAQ8NI17 732 aa18.63■□□□□ 0.57
RXRB-201ENST00000374680 LXNQ9BS40 222 aa18.63■□□□□ 0.57
RXRB-201ENST00000374680 WDR11Q9BZH6 1224 aa18.63■□□□□ 0.57
RXRB-201ENST00000374680 DDX47Q9H0S4 455 aaKnown RBP18.63■□□□□ 0.57
RXRB-201ENST00000374680 TBX3O15119 743 aa18.62■□□□□ 0.57
RXRB-201ENST00000374680 RAD51CO43502 376 aa18.62■□□□□ 0.57
RXRB-201ENST00000374680 EXOC3O60645 756 aa18.62■□□□□ 0.57
RXRB-201ENST00000374680 MEI1Q5TIA1 1274 aa18.62■□□□□ 0.57
RXRB-201ENST00000374680 LRRC31Q6UY01 552 aa18.62■□□□□ 0.57
RXRB-201ENST00000374680 C1orf186Q6ZWK4 172 aa18.62■□□□□ 0.57
RXRB-201ENST00000374680 DAAM2Q86T65 1068 aa18.62■□□□□ 0.57
RXRB-201ENST00000374680 NFIBO00712 420 aa18.62■□□□□ 0.57
RXRB-201ENST00000374680 INPP5BP32019 993 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms