RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 TRIM65Q6PJ69 517 aa18.79■□□□□ 0.6
PTPRU-202ENST00000373779 SH2D3CQ8N5H7 860 aa18.79■□□□□ 0.6
PTPRU-202ENST00000373779 N4BP2L2Q92802 583 aaPredicted RBP18.79■□□□□ 0.6
PTPRU-202ENST00000373779 CD209Q9NNX6 404 aa18.79■□□□□ 0.6
PTPRU-202ENST00000373779 KCND1Q9NSA2 647 aa18.79■□□□□ 0.6
PTPRU-202ENST00000373779 RPS6KA4O75676 772 aa18.79■□□□□ 0.6
PTPRU-202ENST00000373779 PPP1R37O75864 691 aa18.79■□□□□ 0.6
PTPRU-202ENST00000373779 ZNF18P17022 549 aa18.79■□□□□ 0.6
PTPRU-202ENST00000373779 KRT81Q14533 505 aa18.79■□□□□ 0.6
PTPRU-202ENST00000373779 TRAPPC11Q7Z392 1133 aa18.79■□□□□ 0.6
PTPRU-202ENST00000373779 ADGRF4Q8IZF3 695 aa18.79■□□□□ 0.6
PTPRU-202ENST00000373779 MMGT1Q8N4V1 131 aa18.79■□□□□ 0.6
PTPRU-202ENST00000373779 TMEM60Q9H2L4 133 aa18.79■□□□□ 0.6
PTPRU-202ENST00000373779 RBM12Q9NTZ6 932 aaKnown RBP18.79■□□□□ 0.6
PTPRU-202ENST00000373779 ANKFY1Q9P2R3 1169 aa18.79■□□□□ 0.6
PTPRU-202ENST00000373779 TFR2Q9UP52 801 aa18.79■□□□□ 0.6
PTPRU-202ENST00000373779 MRPL47Q9HD33 250 aaKnown RBP18.79■□□□□ 0.6
PTPRU-202ENST00000373779 POLGP54098 1239 aaPredicted RBP18.78■□□□□ 0.6
PTPRU-202ENST00000373779 ARHGAP4P98171 946 aa18.78■□□□□ 0.6
PTPRU-202ENST00000373779 WDR93Q6P2C0 686 aa18.78■□□□□ 0.6
PTPRU-202ENST00000373779 CALR3Q96L12 384 aaKnown RBP18.78■□□□□ 0.6
PTPRU-202ENST00000373779 FAM20AQ96MK3 541 aa18.78■□□□□ 0.6
PTPRU-202ENST00000373779 LRRIQ4A6NIV6 560 aa18.78■□□□□ 0.6
PTPRU-202ENST00000373779 STXBP3O00186 592 aa18.78■□□□□ 0.6
PTPRU-202ENST00000373779 P4HA1P13674 534 aa18.78■□□□□ 0.6
PTPRU-202ENST00000373779 FRMD5Q7Z6J6 570 aa18.78■□□□□ 0.6
PTPRU-202ENST00000373779 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.78■□□□□ 0.6
PTPRU-202ENST00000373779 DNAJC7Q99615 494 aa18.78■□□□□ 0.6
PTPRU-202ENST00000373779 DAPK3O43293 454 aa18.78■□□□□ 0.6
PTPRU-202ENST00000373779 SORBS3O60504 671 aa18.78■□□□□ 0.6
PTPRU-202ENST00000373779 STAT3P40763 770 aa18.78■□□□□ 0.6
PTPRU-202ENST00000373779 GPC5P78333 572 aa18.78■□□□□ 0.6
PTPRU-202ENST00000373779 ZNF211Q13398 564 aaPredicted RBP18.78■□□□□ 0.6
PTPRU-202ENST00000373779 RNF207Q6ZRF8 634 aa18.78■□□□□ 0.6
PTPRU-202ENST00000373779 CCHCR1Q8TD31 782 aa18.78■□□□□ 0.6
PTPRU-202ENST00000373779 HVCN1Q96D96 273 aa18.78■□□□□ 0.6
PTPRU-202ENST00000373779 COA1Q9GZY4 146 aa18.78■□□□□ 0.6
PTPRU-202ENST00000373779 EPN3Q9H201 632 aa18.78■□□□□ 0.6
PTPRU-202ENST00000373779 SMARCAL1Q9NZC9 954 aa18.78■□□□□ 0.6
PTPRU-202ENST00000373779 EXOC1LA0A1B0GW35 172 aa18.77■□□□□ 0.6
PTPRU-202ENST00000373779 MYMKA6NI61 221 aa18.77■□□□□ 0.6
PTPRU-202ENST00000373779 TNNC2P02585 160 aa18.77■□□□□ 0.6
PTPRU-202ENST00000373779 RNASELQ05823 741 aaKnown RBP18.77■□□□□ 0.6
PTPRU-202ENST00000373779 DRAP1Q14919 205 aaPredicted RBP18.77■□□□□ 0.6
PTPRU-202ENST00000373779 CDKAL1Q5VV42 579 aa18.77■□□□□ 0.6
PTPRU-202ENST00000373779 DBNDD1Q9H9R9 158 aa18.77■□□□□ 0.6
PTPRU-202ENST00000373779 KRT1P04264 644 aa18.77■□□□□ 0.6
PTPRU-202ENST00000373779 MDH1P40925 334 aaKnown RBP18.77■□□□□ 0.6
PTPRU-202ENST00000373779 TTBK2Q6IQ55 1244 aa18.77■□□□□ 0.6
PTPRU-202ENST00000373779 GBP7Q8N8V2 638 aaPredicted RBP18.77■□□□□ 0.6
PTPRU-202ENST00000373779 DNAJC17Q9NVM6 304 aaKnown RBP18.77■□□□□ 0.6
PTPRU-202ENST00000373779 PNMA2Q9UL42 364 aa18.77■□□□□ 0.6
PTPRU-202ENST00000373779 TMOD1P28289 359 aa18.77■□□□□ 0.6
PTPRU-202ENST00000373779 TROAPQ12815 778 aa18.77■□□□□ 0.6
PTPRU-202ENST00000373779 ATP6V0A1Q93050 837 aa18.77■□□□□ 0.6
PTPRU-202ENST00000373779 GBP5Q96PP8 586 aa18.77■□□□□ 0.6
PTPRU-202ENST00000373779 FAM187AA6NFU0 413 aa18.77■□□□□ 0.59
PTPRU-202ENST00000373779 ERGIC2Q96RQ1 377 aa18.77■□□□□ 0.59
PTPRU-202ENST00000373779 AMACRQ9UHK6 382 aa18.77■□□□□ 0.59
PTPRU-202ENST00000373779 L1RE1Q9UN81 338 aa18.77■□□□□ 0.59
PTPRU-202ENST00000373779 MEFVO15553 781 aaPredicted RBP18.76■□□□□ 0.59
PTPRU-202ENST00000373779 YWHAGP61981 247 aaKnown RBP eCLIP18.76■□□□□ 0.59
PTPRU-202ENST00000373779 PPP1R2P3Q6NXS1 205 aa18.76■□□□□ 0.59
PTPRU-202ENST00000373779 RPUSD2Q8IZ73 545 aaKnown RBP18.76■□□□□ 0.59
PTPRU-202ENST00000373779 GOLGA8IPA6NC78 632 aa18.76■□□□□ 0.59
PTPRU-202ENST00000373779 GOLGA8JA6NMD2 632 aa18.76■□□□□ 0.59
PTPRU-202ENST00000373779 TXNDC9O14530 226 aa18.76■□□□□ 0.59
PTPRU-202ENST00000373779 CASP7P55210 303 aa18.76■□□□□ 0.59
PTPRU-202ENST00000373779 TMEM179Q6ZVK1 233 aa18.76■□□□□ 0.59
PTPRU-202ENST00000373779 ZBTB8OSQ8IWT0 167 aa18.76■□□□□ 0.59
PTPRU-202ENST00000373779 SEPT9Q9UHD8 586 aaPredicted RBP18.76■□□□□ 0.59
PTPRU-202ENST00000373779 ARHGAP42A6NI28 874 aa18.76■□□□□ 0.59
PTPRU-202ENST00000373779 INHBAP08476 426 aa18.76■□□□□ 0.59
PTPRU-202ENST00000373779 NBPF9Q3BBW0 867 aa18.76■□□□□ 0.59
PTPRU-202ENST00000373779 RPAINQ86UA6 219 aa18.76■□□□□ 0.59
PTPRU-202ENST00000373779 RFFLQ8WZ73 363 aa18.76■□□□□ 0.59
PTPRU-202ENST00000373779 INTS2Q9H0H0 1204 aaKnown RBP18.76■□□□□ 0.59
PTPRU-202ENST00000373779 POLD4Q9HCU8 107 aa18.76■□□□□ 0.59
PTPRU-202ENST00000373779 RNF8O76064 485 aa18.76■□□□□ 0.59
PTPRU-202ENST00000373779 CHRNA3P32297 505 aa18.76■□□□□ 0.59
PTPRU-202ENST00000373779 SCYL2Q6P3W7 929 aa18.76■□□□□ 0.59
PTPRU-202ENST00000373779 ARL1P40616 181 aaPredicted RBP18.75■□□□□ 0.59
PTPRU-202ENST00000373779 IRAK1P51617 712 aa18.75■□□□□ 0.59
PTPRU-202ENST00000373779 GLYCTKQ8IVS8 523 aa18.75■□□□□ 0.59
PTPRU-202ENST00000373779 PPP4R1Q8TF05 950 aa18.75■□□□□ 0.59
PTPRU-202ENST00000373779 PRDM4Q9UKN5 801 aa18.75■□□□□ 0.59
PTPRU-202ENST00000373779 GJA3Q9Y6H8 435 aa18.75■□□□□ 0.59
PTPRU-202ENST00000373779 NWD1Q149M9 1564 aa18.75■□□□□ 0.59
PTPRU-202ENST00000373779 TMEM191BP0C7N4 346 aa18.75■□□□□ 0.59
PTPRU-202ENST00000373779 CC2D2BQ6DHV5 1058 aa18.75■□□□□ 0.59
PTPRU-202ENST00000373779 LRIG3Q6UXM1 1119 aa18.75■□□□□ 0.59
PTPRU-202ENST00000373779 CFAP61Q8NHU2 1237 aa18.75■□□□□ 0.59
PTPRU-202ENST00000373779 ZNF473Q8WTR7 871 aaKnown RBP18.75■□□□□ 0.59
PTPRU-202ENST00000373779 CHMP6Q96FZ7 201 aa18.75■□□□□ 0.59
PTPRU-202ENST00000373779 HDLBPQ00341 1268 aaKnown RBP18.75■□□□□ 0.59
PTPRU-202ENST00000373779 GLG1Q92896 1179 aa18.75■□□□□ 0.59
PTPRU-202ENST00000373779 H3BQF6 201 aa18.75■□□□□ 0.59
PTPRU-202ENST00000373779 PRELPP51888 382 aa18.75■□□□□ 0.59
PTPRU-202ENST00000373779 TBX2Q13207 712 aaPredicted RBP18.75■□□□□ 0.59
PTPRU-202ENST00000373779 FOXP4Q8IVH2 680 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 292.4 ms