RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 FXR1P51114 621 aaKnown RBP eCLIP14.34□□□□□ -0.11
LDB3-203ENST00000372056 CACNB1Q02641 598 aaPredicted RBP14.34□□□□□ -0.11
LDB3-203ENST00000372056 RAD51AP2Q09MP3 1159 aa14.34□□□□□ -0.11
LDB3-203ENST00000372056 GIT2Q14161 759 aa14.34□□□□□ -0.11
LDB3-203ENST00000372056 HERC4Q5GLZ8 1057 aaPredicted RBP14.34□□□□□ -0.11
LDB3-203ENST00000372056 MIS18BP1Q6P0N0 1132 aa14.34□□□□□ -0.11
LDB3-203ENST00000372056 LRRC55Q6ZSA7 311 aa14.34□□□□□ -0.11
LDB3-203ENST00000372056 OTUD6AQ7L8S5 288 aa14.34□□□□□ -0.11
LDB3-203ENST00000372056 C4orf19Q8IY42 314 aa14.34□□□□□ -0.11
LDB3-203ENST00000372056 CCDC51Q96ER9 411 aa14.34□□□□□ -0.11
LDB3-203ENST00000372056 CFHR5Q9BXR6 569 aa14.34□□□□□ -0.11
LDB3-203ENST00000372056 FGFBP2Q9BYJ0 223 aa14.34□□□□□ -0.11
LDB3-203ENST00000372056 PORCNQ9H237 461 aa14.34□□□□□ -0.11
LDB3-203ENST00000372056 UNC45AQ9H3U1 944 aa14.34□□□□□ -0.11
LDB3-203ENST00000372056 EFCC1Q9HA90 598 aa14.34□□□□□ -0.11
LDB3-203ENST00000372056 JPH1Q9HDC5 661 aaPredicted RBP14.34□□□□□ -0.11
LDB3-203ENST00000372056 SLC9A2Q9UBY0 812 aa14.34□□□□□ -0.11
LDB3-203ENST00000372056 KCNG1Q9UIX4 513 aa14.34□□□□□ -0.11
LDB3-203ENST00000372056 SAMM50Q9Y512 469 aa14.34□□□□□ -0.11
LDB3-203ENST00000372056 CCP110O43303 1012 aa14.33□□□□□ -0.11
LDB3-203ENST00000372056 TPM1P09493 284 aa14.33□□□□□ -0.11
LDB3-203ENST00000372056 KCNA2P16389 499 aa14.33□□□□□ -0.11
LDB3-203ENST00000372056 FECHP22830 423 aa14.33□□□□□ -0.11
LDB3-203ENST00000372056 DNM2P50570 870 aa14.33□□□□□ -0.11
LDB3-203ENST00000372056 PSMC5P62195 406 aa14.33□□□□□ -0.11
LDB3-203ENST00000372056 SCFD2Q8WU76 684 aa14.33□□□□□ -0.11
LDB3-203ENST00000372056 CPLX3Q8WVH0 158 aa14.33□□□□□ -0.11
LDB3-203ENST00000372056 DYDC2Q96IM9 177 aa14.33□□□□□ -0.11
LDB3-203ENST00000372056 REEP2Q9BRK0 252 aa14.33□□□□□ -0.11
LDB3-203ENST00000372056 NAA15Q9BXJ9 866 aaKnown RBP14.33□□□□□ -0.11
LDB3-203ENST00000372056 BHMT2Q9H2M3 363 aa14.33□□□□□ -0.11
LDB3-203ENST00000372056 DBR1Q9UK59 544 aaKnown RBP14.33□□□□□ -0.11
LDB3-203ENST00000372056 PPME1Q9Y570 386 aa14.33□□□□□ -0.11
LDB3-203ENST00000372056 NKRFO15226 690 aaKnown RBP eCLIP14.33□□□□□ -0.12
LDB3-203ENST00000372056 FGFR1OPO95684 399 aaKnown RBP14.33□□□□□ -0.12
LDB3-203ENST00000372056 MTIF2P46199 727 aaKnown RBP14.33□□□□□ -0.12
LDB3-203ENST00000372056 ITGB3BPQ13352 177 aaPredicted RBP14.33□□□□□ -0.12
LDB3-203ENST00000372056 CTTNQ14247 550 aaKnown RBP14.33□□□□□ -0.12
LDB3-203ENST00000372056 TTLL4Q14679 1199 aa14.33□□□□□ -0.12
LDB3-203ENST00000372056 MIIPQ5JXC2 388 aa14.33□□□□□ -0.12
LDB3-203ENST00000372056 PAXIP1Q6ZW49 1069 aaPredicted RBP14.33□□□□□ -0.12
LDB3-203ENST00000372056 TSG101Q99816 390 aa14.33□□□□□ -0.12
LDB3-203ENST00000372056 RUSC1Q9BVN2 902 aa14.33□□□□□ -0.12
LDB3-203ENST00000372056 ANKEF1Q9NU02 776 aa14.33□□□□□ -0.12
LDB3-203ENST00000372056 TBC1D7Q9P0N9 293 aa14.33□□□□□ -0.12
LDB3-203ENST00000372056 ZNFX1Q9P2E3 1918 aaKnown RBP14.33□□□□□ -0.12
LDB3-203ENST00000372056 UQCRHLA0A096LP55 91 aa14.32□□□□□ -0.12
LDB3-203ENST00000372056 KIF2AO00139 706 aaPredicted RBP14.32□□□□□ -0.12
LDB3-203ENST00000372056 PES1O00541 588 aaKnown RBP14.32□□□□□ -0.12
LDB3-203ENST00000372056 UQCRHP07919 91 aa14.32□□□□□ -0.12
LDB3-203ENST00000372056 ARHGEF6Q15052 776 aa14.32□□□□□ -0.12
LDB3-203ENST00000372056 TPH2Q8IWU9 490 aa14.32□□□□□ -0.12
LDB3-203ENST00000372056 EXOC8Q8IYI6 725 aa14.32□□□□□ -0.12
LDB3-203ENST00000372056 ZNF784Q8NCA9 323 aaPredicted RBP14.32□□□□□ -0.12
LDB3-203ENST00000372056 MYRIPQ8NFW9 859 aa14.32□□□□□ -0.12
LDB3-203ENST00000372056 SCFD1Q8WVM8 642 aa14.32□□□□□ -0.12
LDB3-203ENST00000372056 ABHD16BQ9H3Z7 469 aa14.32□□□□□ -0.12
LDB3-203ENST00000372056 RNF225M0QZC1 329 aaPredicted RBP14.31□□□□□ -0.12
LDB3-203ENST00000372056 RGS20O76081 388 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 ATG7O95352 703 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 KIF22Q14807 665 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 METTL7BQ6UX53 244 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 PIGOQ8TEQ8 1089 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 NOC4LQ9BVI4 516 aaKnown RBP14.31□□□□□ -0.12
LDB3-203ENST00000372056 SEL1LQ9UBV2 794 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 PPP2R2CQ9Y2T4 447 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 PAXBP1Q9Y5B6 917 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 PLXNB2O15031 1838 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 RBM47A0AV96 593 aaKnown RBP14.31□□□□□ -0.12
LDB3-203ENST00000372056 ZSCAN12O43309 604 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 PGK2P07205 417 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 GAP43P17677 238 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 SCP2P22307 547 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 ABCD1P33897 745 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 RGS2P41220 211 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 SLC26A2P50443 739 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 FKBP3Q00688 224 aaKnown RBP14.31□□□□□ -0.12
LDB3-203ENST00000372056 MAP2K5Q13163 448 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 MORN1Q5T089 497 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 FAM160B1Q5W0V3 765 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 RINT1Q6NUQ1 792 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 SEPT14Q6ZU15 432 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 TOGARAM2Q6ZUX3 1019 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 SFR1Q86XK3 245 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 REXO1L1PQ8IX06 675 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 SLC17A8Q8NDX2 589 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 CAPNS2Q96L46 248 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 CCDC43Q96MW1 224 aaKnown RBP14.31□□□□□ -0.12
LDB3-203ENST00000372056 PURBQ96QR8 312 aaKnown RBP14.31□□□□□ -0.12
LDB3-203ENST00000372056 LXNQ9BS40 222 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 KCTD10Q9H3F6 313 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 ZHX3Q9H4I2 956 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 ABHD10Q9NUJ1 306 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 WRAP73Q9P2S5 460 aaPredicted RBP14.31□□□□□ -0.12
LDB3-203ENST00000372056 CPA4Q9UI42 421 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 ODF2LQ9ULJ1 636 aa14.31□□□□□ -0.12
LDB3-203ENST00000372056 KIAA1217Q5T5P2 1943 aa14.3□□□□□ -0.12
LDB3-203ENST00000372056 SOWAHDA6NJG2 315 aa14.3□□□□□ -0.12
LDB3-203ENST00000372056 ATP9AO75110 1047 aa14.3□□□□□ -0.12
LDB3-203ENST00000372056 CASP5P51878 434 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms