RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 SLX4Q8IY92 1834 aa12.6□□□□□ -0.39
RAB39B-201ENST00000369454 IGLV3-22A0A075B6J6 115 aa12.59□□□□□ -0.39
RAB39B-201ENST00000369454 TARSL2A2RTX5 802 aaKnown RBP12.59□□□□□ -0.39
RAB39B-201ENST00000369454 TMEM150BA6NC51 233 aa12.59□□□□□ -0.39
RAB39B-201ENST00000369454 GLI1P08151 1106 aa12.59□□□□□ -0.39
RAB39B-201ENST00000369454 ALKBH5Q6P6C2 394 aaKnown RBP12.59□□□□□ -0.39
RAB39B-201ENST00000369454 SYCP3Q8IZU3 236 aa12.59□□□□□ -0.39
RAB39B-201ENST00000369454 U2AF1L4Q8WU68 220 aaKnown RBP12.59□□□□□ -0.39
RAB39B-201ENST00000369454 AP1M1Q9BXS5 423 aa12.59□□□□□ -0.39
RAB39B-201ENST00000369454 STIM2Q9P246 746 aa12.59□□□□□ -0.39
RAB39B-201ENST00000369454 PJA2O43164 708 aa12.59□□□□□ -0.39
RAB39B-201ENST00000369454 LRRN2O75325 713 aa12.59□□□□□ -0.39
RAB39B-201ENST00000369454 EYA4O95677 639 aa12.59□□□□□ -0.39
RAB39B-201ENST00000369454 CARSP49589 748 aaKnown RBP12.59□□□□□ -0.39
RAB39B-201ENST00000369454 NAB2Q15742 525 aa12.59□□□□□ -0.39
RAB39B-201ENST00000369454 IRF2BP2Q7Z5L9 587 aa12.59□□□□□ -0.39
RAB39B-201ENST00000369454 FAM178BQ8IXR5 827 aa12.59□□□□□ -0.39
RAB39B-201ENST00000369454 FAM186BQ8IYM0 893 aa12.59□□□□□ -0.39
RAB39B-201ENST00000369454 SLC35C1Q96A29 364 aa12.59□□□□□ -0.39
RAB39B-201ENST00000369454 TYW1Q9NV66 732 aaKnown RBP12.59□□□□□ -0.39
RAB39B-201ENST00000369454 GRID2IPA4D2P6 1211 aa12.59□□□□□ -0.39
RAB39B-201ENST00000369454 PDXKO00764 312 aa12.59□□□□□ -0.39
RAB39B-201ENST00000369454 TGFB1I1O43294 461 aa12.59□□□□□ -0.39
RAB39B-201ENST00000369454 CEP104O60308 925 aa12.59□□□□□ -0.39
RAB39B-201ENST00000369454 HEXIM1O94992 359 aaKnown RBP12.59□□□□□ -0.39
RAB39B-201ENST00000369454 KCTD16Q68DU8 428 aa12.59□□□□□ -0.39
RAB39B-201ENST00000369454 GBP6Q6ZN66 633 aa12.59□□□□□ -0.39
RAB39B-201ENST00000369454 ADAT2Q7Z6V5 191 aaKnown RBP12.59□□□□□ -0.39
RAB39B-201ENST00000369454 CNKSR1Q969H4 720 aa12.59□□□□□ -0.39
RAB39B-201ENST00000369454 NUCKS1Q9H1E3 243 aaKnown RBP12.59□□□□□ -0.39
RAB39B-201ENST00000369454 ZNF70Q9UC06 446 aaPredicted RBP12.59□□□□□ -0.39
RAB39B-201ENST00000369454 TRAF3IP3Q9Y228 551 aa12.59□□□□□ -0.39
RAB39B-201ENST00000369454 LRRC37AA6NMS7 1700 aa12.59□□□□□ -0.39
RAB39B-201ENST00000369454 SHTN1A0MZ66 631 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 SPDYE2BA6NHP3 402 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 TBX3O15119 743 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 SPDYE6P0CI01 402 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 RPL13P26373 211 aaKnown RBP12.58□□□□□ -0.4
RAB39B-201ENST00000369454 HDLBPQ00341 1268 aaKnown RBP12.58□□□□□ -0.4
RAB39B-201ENST00000369454 MOXD1Q6UVY6 613 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 PPP4R3CPQ6ZMV5 832 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 TSEN2Q8NCE0 465 aaKnown RBP12.58□□□□□ -0.4
RAB39B-201ENST00000369454 AFAP1L1Q8TED9 768 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 TAF4BQ92750 862 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 EDEM3Q9BZQ6 932 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 UNC45AQ9H3U1 944 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 PARVGQ9HBI0 331 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 AGPSO00116 658 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 ENTPD3O75355 529 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 FAM153BP0C7A2 387 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 FAM153CQ494X1 144 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 FRMD5Q7Z6J6 570 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 MMGT1Q8N4V1 131 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 HSD17B14Q9BPX1 270 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 GOPCQ9HD26 462 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 AIPL1Q9NZN9 384 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 FAM153AQ9UHL3 310 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 COL11A2P13942 1736 aaPredicted RBP12.58□□□□□ -0.4
RAB39B-201ENST00000369454 EN1Q05925 392 aaPredicted RBP12.58□□□□□ -0.4
RAB39B-201ENST00000369454 CEP55Q53EZ4 464 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 NAA35Q5VZE5 725 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 EPM2AIP1Q7L775 607 aaPredicted RBP12.58□□□□□ -0.4
RAB39B-201ENST00000369454 LDHDQ86WU2 507 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 GLYCTKQ8IVS8 523 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 ELMO3Q96BJ8 720 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 HOOK2Q96ED9 719 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 LXNQ9BS40 222 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 MED4Q9NPJ6 270 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 CHORDC1Q9UHD1 332 aaPredicted RBP12.58□□□□□ -0.4
RAB39B-201ENST00000369454 NAGPAQ9UK23 515 aa12.58□□□□□ -0.4
RAB39B-201ENST00000369454 BRWD3Q6RI45 1802 aa12.57□□□□□ -0.4
RAB39B-201ENST00000369454 ACTN2P35609 894 aa12.57□□□□□ -0.4
RAB39B-201ENST00000369454 MARSP56192 900 aaKnown RBP12.57□□□□□ -0.4
RAB39B-201ENST00000369454 HLTFQ14527 1009 aaKnown RBP eCLIP12.57□□□□□ -0.4
RAB39B-201ENST00000369454 EPHA7Q15375 998 aa12.57□□□□□ -0.4
RAB39B-201ENST00000369454 GRIPAP1Q4V328 841 aa12.57□□□□□ -0.4
RAB39B-201ENST00000369454 RNF10Q8N5U6 811 aaKnown RBP12.57□□□□□ -0.4
RAB39B-201ENST00000369454 RUFY1Q96T51 708 aa12.57□□□□□ -0.4
RAB39B-201ENST00000369454 RSPH14Q9UHP6 348 aa12.57□□□□□ -0.4
RAB39B-201ENST00000369454 IPO5O00410 1097 aaKnown RBP12.57□□□□□ -0.4
RAB39B-201ENST00000369454 NFIBO00712 420 aa12.57□□□□□ -0.4
RAB39B-201ENST00000369454 PLSCR1O15162 318 aa12.57□□□□□ -0.4
RAB39B-201ENST00000369454 SORBS3O60504 671 aa12.57□□□□□ -0.4
RAB39B-201ENST00000369454 EXOC3O60645 756 aa12.57□□□□□ -0.4
RAB39B-201ENST00000369454 CIITAP33076 1130 aa12.57□□□□□ -0.4
RAB39B-201ENST00000369454 USP8P40818 1118 aa12.57□□□□□ -0.4
RAB39B-201ENST00000369454 PRPF4BQ13523 1007 aaKnown RBP12.57□□□□□ -0.4
RAB39B-201ENST00000369454 RPS6KA1Q15418 735 aa12.57□□□□□ -0.4
RAB39B-201ENST00000369454 CBWD6Q4V339 395 aa12.57□□□□□ -0.4
RAB39B-201ENST00000369454 CBWD3Q5JTY5 395 aa12.57□□□□□ -0.4
RAB39B-201ENST00000369454 CBWD5Q5RIA9 395 aa12.57□□□□□ -0.4
RAB39B-201ENST00000369454 STYK1Q6J9G0 422 aa12.57□□□□□ -0.4
RAB39B-201ENST00000369454 WDR11Q9BZH6 1224 aa12.57□□□□□ -0.4
RAB39B-201ENST00000369454 CENPHQ9H3R5 247 aa12.57□□□□□ -0.4
RAB39B-201ENST00000369454 CCPG1Q9ULG6 757 aa12.57□□□□□ -0.4
RAB39B-201ENST00000369454 TMX2Q9Y320 296 aa12.57□□□□□ -0.4
RAB39B-201ENST00000369454 SIPA1L1O43166 1804 aa12.57□□□□□ -0.4
RAB39B-201ENST00000369454 ARHGEF35A5YM69 484 aa12.57□□□□□ -0.4
RAB39B-201ENST00000369454 GOLGA6CA6NDK9 693 aa12.57□□□□□ -0.4
RAB39B-201ENST00000369454 PSMD10O75832 226 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms