RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 MDM1Q8TC05 714 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 ATP8B4Q8TF62 1192 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 RAD54LQ92698 747 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 PNMA5Q96PV4 448 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 AP1M1Q9BXS5 423 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 STMN4Q9H169 189 aaPredicted RBP11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 ATP8A2Q9NTI2 1148 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 SLC5A4Q9NY91 659 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 ABCF2Q9UG63 623 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 AMACRQ9UHK6 382 aa11.45□□□□□ -0.58
LYSMD1-201ENST00000368908 KLHL33A6NCF5 533 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 FAM187AA6NFU0 413 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 TSPY2A6NKD2 308 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 TTI1O43156 1089 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 RPS6KA4O75676 772 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 WFS1O76024 890 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 IGHMBP2P38935 993 aaKnown RBP11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 PRKCIP41743 596 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 GALNTL6Q49A17 601 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 FAM47AQ5JRC9 791 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 INTS5Q6P9B9 1019 aaKnown RBP11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 HEATR3Q7Z4Q2 680 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 PNMA8AQ86V59 439 aaPredicted RBP11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 LRRC34Q8IZ02 419 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 FAM133AQ8N9E0 248 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 PNMA1Q8ND90 353 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 NEK9Q8TD19 979 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 SPDL1Q96EA4 605 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 ZNF570Q96NI8 536 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 CRNKL1Q9BZJ0 848 aaKnown RBP11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 EPB41L4BQ9H329 900 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 PABPC3Q9H361 631 aaKnown RBP11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 MAD2L2Q9UI95 211 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 ANKRD33BA6NCL7 494 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 CCNT1O60563 726 aaKnown RBP11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 TECP42680 631 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 DRG2P55039 364 aaKnown RBP11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 PTENP60484 403 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 ADCY2Q08462 1091 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 CLUL1Q15846 466 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 TMEM119Q4V9L6 283 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 CAPRIN2Q6IMN6 1127 aaKnown RBP11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 MIS18BP1Q6P0N0 1132 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 BTNL9Q6UXG8 535 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 PEX26Q7Z412 305 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 TBC1D1Q86TI0 1168 aaPredicted RBP11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 SAAL1Q96ER3 474 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 THOC1Q96FV9 657 aaKnown RBP11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 PLCD4Q9BRC7 762 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 DCP1AQ9NPI6 582 aaPredicted RBP11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 ZDHHC18Q9NUE0 388 aa11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 CNOT7Q9UIV1 285 aaKnown RBP11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.44□□□□□ -0.58
LYSMD1-201ENST00000368908 RARAP10276 462 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 BLMHQ13867 455 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 LETM2Q2VYF4 491 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 CCDC152Q4G0S7 254 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 C6orf118Q5T5N4 469 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 DUPD1Q68J44 220 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 IRF2BP2Q7Z5L9 587 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 HES6Q96HZ4 224 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 CDK5RAP3Q96JB5 506 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 SELENOSQ9BQE4 189 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 INTS9Q9NV88 658 aaKnown RBP11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 NAGPAQ9UK23 515 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 RTCBQ9Y3I0 505 aaKnown RBP11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 O00370 1275 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 TRAF5O00463 557 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 GNPATO15228 680 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 FLOT1O75955 427 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 ITGA4P13612 1032 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 GBP1P32455 592 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 PDE6CP51160 858 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 PMS2P54278 862 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 CHRNDQ07001 517 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 TMEM266Q2M3C6 531 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 SLC35G1Q2M3R5 365 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 TNFAIP8L3Q5GJ75 292 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 DENND2CQ68D51 928 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 NT5DC3Q86UY8 548 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 SLC16A10Q8TF71 515 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 CNKSR2Q8WXI2 1034 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 IFT74Q96LB3 600 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 MTMR9Q96QG7 549 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 ELAC2Q9BQ52 826 aaKnown RBP11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 SPZ1Q9BXG8 430 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 RAB34Q9BZG1 259 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 LRRC4CQ9HCJ2 640 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 C6orf50Q9HD87 102 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 PANK4Q9NVE7 773 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 TFCP2L1Q9NZI6 479 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 AGAP1Q9UPQ3 857 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 ATP8A1Q9Y2Q0 1164 aa11.43□□□□□ -0.58
LYSMD1-201ENST00000368908 SNX3O60493 162 aa11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 GFPT2O94808 682 aa11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 GNA11P29992 359 aa11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 IL6STP40189 918 aaPredicted RBP11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 ALDH5A1P51649 535 aaPredicted RBP11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 PTK2Q05397 1052 aa11.42□□□□□ -0.58
LYSMD1-201ENST00000368908 COASYQ13057 564 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms