RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 FAM167AQ96KS9 214 aa21.37■■□□□ 1.01
CKS1B-203ENST00000368439 FAM20AQ96MK3 541 aa21.37■■□□□ 1.01
CKS1B-203ENST00000368439 CELF4Q9BZC1 486 aaKnown RBP21.37■■□□□ 1.01
CKS1B-203ENST00000368439 AGO3Q9H9G7 860 aaKnown RBP21.37■■□□□ 1.01
CKS1B-203ENST00000368439 BRMS1Q9HCU9 246 aa21.37■■□□□ 1.01
CKS1B-203ENST00000368439 SH2B1Q9NRF2 756 aaPredicted RBP21.37■■□□□ 1.01
CKS1B-203ENST00000368439 TRPV2Q9Y5S1 764 aa21.37■■□□□ 1.01
CKS1B-203ENST00000368439 SQORQ9Y6N5 450 aa21.37■■□□□ 1.01
CKS1B-203ENST00000368439 PRUNE2Q8WUY3 3088 aa21.37■■□□□ 1.01
CKS1B-203ENST00000368439 EML1O00423 815 aa21.36■■□□□ 1.01
CKS1B-203ENST00000368439 WNT7AO00755 349 aa21.36■■□□□ 1.01
CKS1B-203ENST00000368439 TBX3O15119 743 aa21.36■■□□□ 1.01
CKS1B-203ENST00000368439 AMHP03971 560 aa21.36■■□□□ 1.01
CKS1B-203ENST00000368439 OATP04181 439 aa21.36■■□□□ 1.01
CKS1B-203ENST00000368439 PRKCEQ02156 737 aa21.36■■□□□ 1.01
CKS1B-203ENST00000368439 PPP2R5CQ13362 524 aa21.36■■□□□ 1.01
CKS1B-203ENST00000368439 TSHZ1Q6ZSZ6 1077 aa21.36■■□□□ 1.01
CKS1B-203ENST00000368439 TRMT1LQ7Z2T5 733 aaKnown RBP21.36■■□□□ 1.01
CKS1B-203ENST00000368439 SPRED2Q7Z698 418 aa21.36■■□□□ 1.01
CKS1B-203ENST00000368439 POTEDQ86YR6 584 aa21.36■■□□□ 1.01
CKS1B-203ENST00000368439 LINC01465Q8N7H1 131 aa21.36■■□□□ 1.01
CKS1B-203ENST00000368439 RAD9AQ99638 391 aa21.36■■□□□ 1.01
CKS1B-203ENST00000368439 NAP1L4Q99733 375 aaKnown RBP21.36■■□□□ 1.01
CKS1B-203ENST00000368439 TTC3P53804 2025 aa21.35■■□□□ 1.01
CKS1B-203ENST00000368439 HTRA4P83105 476 aaPredicted RBP21.35■■□□□ 1.01
CKS1B-203ENST00000368439 TARBP2Q15633 366 aaKnown RBP21.35■■□□□ 1.01
CKS1B-203ENST00000368439 MYOCDQ8IZQ8 938 aa21.35■■□□□ 1.01
CKS1B-203ENST00000368439 MAFAQ8NHW3 353 aaPredicted RBP21.35■■□□□ 1.01
CKS1B-203ENST00000368439 TOP1MTQ969P6 601 aa21.35■■□□□ 1.01
CKS1B-203ENST00000368439 CEP89Q96ST8 783 aa21.35■■□□□ 1.01
CKS1B-203ENST00000368439 ZBED2Q9BTP6 218 aa21.35■■□□□ 1.01
CKS1B-203ENST00000368439 CEP131Q9UPN4 1083 aa21.35■■□□□ 1.01
CKS1B-203ENST00000368439 UNC80Q8N2C7 3258 aa21.34■■□□□ 1.01
CKS1B-203ENST00000368439 EPOPA6NHQ4 379 aa21.34■■□□□ 1.01
CKS1B-203ENST00000368439 CD52P31358 61 aa21.34■■□□□ 1.01
CKS1B-203ENST00000368439 SPIRE1Q08AE8 756 aa21.34■■□□□ 1.01
CKS1B-203ENST00000368439 TRIM29Q14134 588 aa21.34■■□□□ 1.01
CKS1B-203ENST00000368439 FAM117BQ6P1L5 589 aa21.34■■□□□ 1.01
CKS1B-203ENST00000368439 CDHR5Q9HBB8 845 aa21.34■■□□□ 1.01
CKS1B-203ENST00000368439 NRBP2Q9NSY0 501 aa21.34■■□□□ 1.01
CKS1B-203ENST00000368439 COL4A6Q14031 1691 aa21.34■■□□□ 1.01
CKS1B-203ENST00000368439 CD2BP2O95400 341 aaKnown RBP21.33■■□□□ 1.01
CKS1B-203ENST00000368439 GUCY1B3Q02153 619 aa21.33■■□□□ 1.01
CKS1B-203ENST00000368439 RTN4RL1Q86UN2 441 aaPredicted RBP21.33■■□□□ 1.01
CKS1B-203ENST00000368439 USP38Q8NB14 1042 aa21.33■■□□□ 1.01
CKS1B-203ENST00000368439 SP7Q8TDD2 431 aaPredicted RBP21.33■■□□□ 1.01
CKS1B-203ENST00000368439 LINC01599Q8WXQ3 324 aa21.33■■□□□ 1.01
CKS1B-203ENST00000368439 TBC1D32Q96NH3 1257 aa21.33■■□□□ 1.01
CKS1B-203ENST00000368439 GAS2L1Q99501 681 aaPredicted RBP21.33■■□□□ 1.01
CKS1B-203ENST00000368439 NIFKQ9BYG3 293 aaKnown RBP21.33■■□□□ 1.01
CKS1B-203ENST00000368439 CERS4Q9HA82 394 aa21.33■■□□□ 1.01
CKS1B-203ENST00000368439 COL4A4P53420 1690 aaPredicted RBP21.33■■□□□ 1
CKS1B-203ENST00000368439 LINC01553A4QN01 128 aa21.32■■□□□ 1
CKS1B-203ENST00000368439 M0QZ92 97 aa21.32■■□□□ 1
CKS1B-203ENST00000368439 ENPP3O14638 875 aa21.32■■□□□ 1
CKS1B-203ENST00000368439 MAGEB2O15479 319 aa21.32■■□□□ 1
CKS1B-203ENST00000368439 HMGN5P82970 282 aaKnown RBP21.32■■□□□ 1
CKS1B-203ENST00000368439 BANK1Q8NDB2 785 aa21.32■■□□□ 1
CKS1B-203ENST00000368439 TMEM40Q8WWA1 233 aa21.32■■□□□ 1
CKS1B-203ENST00000368439 C8orf76Q96K31 380 aa21.32■■□□□ 1
CKS1B-203ENST00000368439 PADI3Q9ULW8 664 aa21.32■■□□□ 1
CKS1B-203ENST00000368439 INSL6Q9Y581 213 aa21.32■■□□□ 1
CKS1B-203ENST00000368439 REV3LO60673 3130 aa21.31■■□□□ 1
CKS1B-203ENST00000368439 TMEM150BA6NC51 233 aa21.31■■□□□ 1
CKS1B-203ENST00000368439 RFXAPO00287 272 aa21.31■■□□□ 1
CKS1B-203ENST00000368439 GPR32O75388 356 aa21.31■■□□□ 1
CKS1B-203ENST00000368439 CLCN3P51790 818 aa21.31■■□□□ 1
CKS1B-203ENST00000368439 XKR3Q5GH77 459 aa21.31■■□□□ 1
CKS1B-203ENST00000368439 EFCAB12Q6NXP0 572 aa21.31■■□□□ 1
CKS1B-203ENST00000368439 IL27Q8NEV9 243 aa21.31■■□□□ 1
CKS1B-203ENST00000368439 FBXO18Q8NFZ0 1043 aa21.31■■□□□ 1
CKS1B-203ENST00000368439 UPF2Q9HAU5 1272 aaKnown RBP21.31■■□□□ 1
CKS1B-203ENST00000368439 WRAP73Q9P2S5 460 aaPredicted RBP21.31■■□□□ 1
CKS1B-203ENST00000368439 NLRC5Q86WI3 1866 aa21.3■■□□□ 1
CKS1B-203ENST00000368439 VTNP04004 478 aa21.3■■□□□ 1
CKS1B-203ENST00000368439 PSMC5P62195 406 aa21.3■■□□□ 1
CKS1B-203ENST00000368439 ANO5Q75V66 913 aa21.3■■□□□ 1
CKS1B-203ENST00000368439 SLFN12Q8IYM2 578 aa21.3■■□□□ 1
CKS1B-203ENST00000368439 CRIPAKQ8N1N5 446 aa21.3■■□□□ 1
CKS1B-203ENST00000368439 LRRC71Q8N4P6 559 aa21.3■■□□□ 1
CKS1B-203ENST00000368439 METTL13Q8N6R0 699 aa21.3■■□□□ 1
CKS1B-203ENST00000368439 SLC17A8Q8NDX2 589 aa21.3■■□□□ 1
CKS1B-203ENST00000368439 TMX1Q9H3N1 280 aa21.3■■□□□ 1
CKS1B-203ENST00000368439 NOC2LQ9Y3T9 749 aaKnown RBP21.3■■□□□ 1
CKS1B-203ENST00000368439 IGKV6-21A0A0C4DH24 114 aa21.29■■□□□ 1
CKS1B-203ENST00000368439 ST18O60284 1047 aa21.29■■□□□ 1
CKS1B-203ENST00000368439 UPP2O95045 317 aa21.29■■□□□ 1
CKS1B-203ENST00000368439 POU3F3P20264 500 aaPredicted RBP21.29■■□□□ 1
CKS1B-203ENST00000368439 CRYBB1P53674 252 aaPredicted RBP21.29■■□□□ 1
CKS1B-203ENST00000368439 ERVK-21P61565 698 aa21.29■■□□□ 1
CKS1B-203ENST00000368439 PAK2Q13177 524 aa21.29■■□□□ 1
CKS1B-203ENST00000368439 EPHA7Q15375 998 aa21.29■■□□□ 1
CKS1B-203ENST00000368439 KIZQ2M2Z5 673 aa21.29■■□□□ 1
CKS1B-203ENST00000368439 TMEM266Q2M3C6 531 aa21.29■■□□□ 1
CKS1B-203ENST00000368439 ARNTL2Q8WYA1 636 aa21.29■■□□□ 1
CKS1B-203ENST00000368439 MTMR9Q96QG7 549 aa21.29■■□□□ 1
CKS1B-203ENST00000368439 ADAMTS10Q9H324 1103 aa21.29■■□□□ 1
CKS1B-203ENST00000368439 FOXP1Q9H334 677 aaPredicted RBP21.29■■□□□ 1
CKS1B-203ENST00000368439 RC3H2Q9HBD1 1191 aaKnown RBP21.29■■□□□ 1
CKS1B-203ENST00000368439 ERVK-5Q9HDB9 667 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms