RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 KCTD19Q17RG1 926 aaPredicted RBP19.81■□□□□ 0.76
UBQLN4-201ENST00000368309 MUM1L1Q5H9M0 696 aa19.81■□□□□ 0.76
UBQLN4-201ENST00000368309 ALKBH5Q6P6C2 394 aaKnown RBP19.81■□□□□ 0.76
UBQLN4-201ENST00000368309 TSEN2Q8NCE0 465 aaKnown RBP19.81■□□□□ 0.76
UBQLN4-201ENST00000368309 KRT12Q99456 494 aa19.81■□□□□ 0.76
UBQLN4-201ENST00000368309 COL11A2P13942 1736 aaPredicted RBP19.8■□□□□ 0.76
UBQLN4-201ENST00000368309 PPIP5K2O43314 1243 aa19.8■□□□□ 0.76
UBQLN4-201ENST00000368309 GBP6Q6ZN66 633 aa19.8■□□□□ 0.76
UBQLN4-201ENST00000368309 EPB41L5Q9HCM4 733 aa19.8■□□□□ 0.76
UBQLN4-201ENST00000368309 NAGPAQ9UK23 515 aa19.8■□□□□ 0.76
UBQLN4-201ENST00000368309 CARSP49589 748 aaKnown RBP19.8■□□□□ 0.76
UBQLN4-201ENST00000368309 PIK3CDO00329 1044 aa19.8■□□□□ 0.76
UBQLN4-201ENST00000368309 GUCY2DQ02846 1103 aa19.8■□□□□ 0.76
UBQLN4-201ENST00000368309 CDAN1Q8IWY9 1227 aa19.8■□□□□ 0.76
UBQLN4-201ENST00000368309 SIX2Q9NPC8 291 aa19.8■□□□□ 0.76
UBQLN4-201ENST00000368309 GCOM1H8Y6P7 765 aaPredicted RBP19.79■□□□□ 0.76
UBQLN4-201ENST00000368309 KCNK3O14649 394 aa19.79■□□□□ 0.76
UBQLN4-201ENST00000368309 POLR2MP0CAP2 368 aa19.79■□□□□ 0.76
UBQLN4-201ENST00000368309 TRADDQ15628 312 aa19.79■□□□□ 0.76
UBQLN4-201ENST00000368309 C1orf186Q6ZWK4 172 aa19.79■□□□□ 0.76
UBQLN4-201ENST00000368309 MIGA2Q7L4E1 593 aa19.79■□□□□ 0.76
UBQLN4-201ENST00000368309 ARHGEF10LQ9HCE6 1279 aa19.79■□□□□ 0.76
UBQLN4-201ENST00000368309 WRAP73Q9P2S5 460 aaPredicted RBP19.79■□□□□ 0.76
UBQLN4-201ENST00000368309 NFU1Q9UMS0 254 aa19.79■□□□□ 0.76
UBQLN4-201ENST00000368309 PSMD10O75832 226 aa19.79■□□□□ 0.76
UBQLN4-201ENST00000368309 HEXIM1O94992 359 aaKnown RBP19.79■□□□□ 0.76
UBQLN4-201ENST00000368309 BMT2Q1RMZ1 405 aa19.79■□□□□ 0.76
UBQLN4-201ENST00000368309 STYK1Q6J9G0 422 aa19.79■□□□□ 0.76
UBQLN4-201ENST00000368309 METTL14Q9HCE5 456 aaKnown RBP19.79■□□□□ 0.76
UBQLN4-201ENST00000368309 ATRNL1Q5VV63 1379 aa19.79■□□□□ 0.76
UBQLN4-201ENST00000368309 PLSCR1O15162 318 aa19.79■□□□□ 0.76
UBQLN4-201ENST00000368309 C21orf2O43822 256 aa19.79■□□□□ 0.76
UBQLN4-201ENST00000368309 GAS7O60861 476 aa19.79■□□□□ 0.76
UBQLN4-201ENST00000368309 FBXO28Q9NVF7 368 aa19.79■□□□□ 0.76
UBQLN4-201ENST00000368309 STK24Q9Y6E0 443 aa19.79■□□□□ 0.76
UBQLN4-201ENST00000368309 RAD17O75943 681 aa19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 ARP10275 920 aa19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 EPHB4P54760 987 aa19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 PLS1Q14651 629 aa19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 KLHL7Q8IXQ5 586 aa19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 PKD2L1Q9P0L9 805 aa19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 RNF14Q9UBS8 474 aa19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 GFPT2O94808 682 aa19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 FAM153BP0C7A2 387 aa19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 RPS6KA1Q15418 735 aa19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 FAM153CQ494X1 144 aa19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 FAM186BQ8IYM0 893 aa19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 PROCA1Q8NCQ7 364 aaPredicted RBP19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 FLAD1Q8NFF5 587 aa19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 INPP4AQ96PE3 977 aaPredicted RBP19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 OLFML3Q9NRN5 406 aa19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 FAM153AQ9UHL3 310 aa19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 SLX4Q8IY92 1834 aa19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 GOLGA6CA6NDK9 693 aa19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 DDX39AO00148 427 aaKnown RBP19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 GOLGA6DP0CG33 693 aa19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 LRRC31Q6UY01 552 aa19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 MAEAQ7L5Y9 396 aa19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 PARVGQ9HBI0 331 aa19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 GOLGA6AQ9NYA3 693 aa19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 TMX2Q9Y320 296 aa19.78■□□□□ 0.76
UBQLN4-201ENST00000368309 CYP2J2P51589 502 aa19.77■□□□□ 0.76
UBQLN4-201ENST00000368309 RDH13Q8NBN7 331 aa19.77■□□□□ 0.76
UBQLN4-201ENST00000368309 C7orf43Q8WVR3 580 aa19.77■□□□□ 0.76
UBQLN4-201ENST00000368309 TAF4BQ92750 862 aa19.77■□□□□ 0.76
UBQLN4-201ENST00000368309 TMOD2Q9NZR1 351 aa19.77■□□□□ 0.76
UBQLN4-201ENST00000368309 BZW2Q9Y6E2 419 aaKnown RBP19.77■□□□□ 0.76
UBQLN4-201ENST00000368309 IFT20Q8IY31 132 aa19.77■□□□□ 0.76
UBQLN4-201ENST00000368309 ZBTB12Q9Y330 459 aaPredicted RBP19.77■□□□□ 0.76
UBQLN4-201ENST00000368309 GUCY2FP51841 1108 aa19.77■□□□□ 0.75
UBQLN4-201ENST00000368309 CEP55Q53EZ4 464 aa19.77■□□□□ 0.75
UBQLN4-201ENST00000368309 GLIS2Q9BZE0 524 aaPredicted RBP19.77■□□□□ 0.75
UBQLN4-201ENST00000368309 VEZTQ9HBM0 779 aa19.77■□□□□ 0.75
UBQLN4-201ENST00000368309 LCMT1Q9UIC8 334 aa19.77■□□□□ 0.75
UBQLN4-201ENST00000368309 ZMYM2Q9UBW7 1377 aa19.76■□□□□ 0.75
UBQLN4-201ENST00000368309 SLC16A3O15427 465 aaKnown RBP19.76■□□□□ 0.75
UBQLN4-201ENST00000368309 GAP43P17677 238 aa19.76■□□□□ 0.75
UBQLN4-201ENST00000368309 EMBQ6PCB8 327 aa19.76■□□□□ 0.75
UBQLN4-201ENST00000368309 U2AF1L4Q8WU68 220 aaKnown RBP19.76■□□□□ 0.75
UBQLN4-201ENST00000368309 CNKSR1Q969H4 720 aa19.76■□□□□ 0.75
UBQLN4-201ENST00000368309 BORCS6Q96GS4 357 aa19.76■□□□□ 0.75
UBQLN4-201ENST00000368309 ZNF577Q9BSK1 485 aa19.76■□□□□ 0.75
UBQLN4-201ENST00000368309 TUFT1Q9NNX1 390 aa19.76■□□□□ 0.75
UBQLN4-201ENST00000368309 CWC15Q9P013 229 aaKnown RBP19.76■□□□□ 0.75
UBQLN4-201ENST00000368309 HERC5Q9UII4 1024 aaKnown RBP19.76■□□□□ 0.75
UBQLN4-201ENST00000368309 BRWD3Q6RI45 1802 aa19.76■□□□□ 0.75
UBQLN4-201ENST00000368309 SHTN1A0MZ66 631 aa19.76■□□□□ 0.75
UBQLN4-201ENST00000368309 TMCO5BA8MYB1 307 aa19.76■□□□□ 0.75
UBQLN4-201ENST00000368309 PSMC2P35998 433 aaKnown RBP19.76■□□□□ 0.75
UBQLN4-201ENST00000368309 GLE1Q53GS7 698 aaKnown RBP19.76■□□□□ 0.75
UBQLN4-201ENST00000368309 DNAJC21Q5F1R6 531 aaKnown RBP19.76■□□□□ 0.75
UBQLN4-201ENST00000368309 FAM178BQ8IXR5 827 aa19.76■□□□□ 0.75
UBQLN4-201ENST00000368309 FAM76AQ8TAV0 307 aa19.76■□□□□ 0.75
UBQLN4-201ENST00000368309 UNC45AQ9H3U1 944 aa19.76■□□□□ 0.75
UBQLN4-201ENST00000368309 GOPCQ9HD26 462 aa19.76■□□□□ 0.75
UBQLN4-201ENST00000368309 SCAF8Q9UPN6 1271 aaKnown RBP19.76■□□□□ 0.75
UBQLN4-201ENST00000368309 CEP104O60308 925 aa19.75■□□□□ 0.75
UBQLN4-201ENST00000368309 FLOT1O75955 427 aa19.75■□□□□ 0.75
UBQLN4-201ENST00000368309 TRIM49P0CI25 452 aa19.75■□□□□ 0.75
UBQLN4-201ENST00000368309 TRIM49CP0CI26 452 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms