RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 URB2Q14146 1524 aaKnown RBP17.91■□□□□ 0.46
NID1-202ENST00000366595 GAS2L3Q86XJ1 694 aa17.91■□□□□ 0.46
NID1-202ENST00000366595 ZNF577Q9BSK1 485 aa17.91■□□□□ 0.46
NID1-202ENST00000366595 ETNK1Q9HBU6 452 aa17.91■□□□□ 0.46
NID1-202ENST00000366595 GTSE1Q9NYZ3 720 aa17.91■□□□□ 0.46
NID1-202ENST00000366595 MAP3K19Q56UN5 1328 aa17.9■□□□□ 0.46
NID1-202ENST00000366595 NLRP14Q86W24 1093 aa17.9■□□□□ 0.46
NID1-202ENST00000366595 RAPGEF5Q92565 580 aa17.9■□□□□ 0.46
NID1-202ENST00000366595 OCM2P0CE71 109 aa17.9■□□□□ 0.46
NID1-202ENST00000366595 OCMP0CE72 109 aaPredicted RBP17.9■□□□□ 0.46
NID1-202ENST00000366595 S100A5P33763 92 aa17.9■□□□□ 0.46
NID1-202ENST00000366595 BLVRAP53004 296 aa17.9■□□□□ 0.46
NID1-202ENST00000366595 RPS8P62241 208 aaKnown RBP17.9■□□□□ 0.46
NID1-202ENST00000366595 HDLBPQ00341 1268 aaKnown RBP17.9■□□□□ 0.46
NID1-202ENST00000366595 MXD3Q9BW11 206 aa17.9■□□□□ 0.46
NID1-202ENST00000366595 ECT2Q9H8V3 914 aa17.9■□□□□ 0.46
NID1-202ENST00000366595 MRGBPQ9NV56 204 aa17.9■□□□□ 0.46
NID1-202ENST00000366595 IRAK4Q9NWZ3 460 aa17.9■□□□□ 0.46
NID1-202ENST00000366595 KRT75O95678 551 aa17.9■□□□□ 0.46
NID1-202ENST00000366595 FGAP02671 866 aa17.9■□□□□ 0.46
NID1-202ENST00000366595 CC2D1AQ6P1N0 951 aaPredicted RBP17.9■□□□□ 0.46
NID1-202ENST00000366595 ADA2Q9NZK5 511 aa17.9■□□□□ 0.46
NID1-202ENST00000366595 TOPBP1Q92547 1522 aa17.9■□□□□ 0.46
NID1-202ENST00000366595 SLC7A5Q01650 507 aa17.9■□□□□ 0.46
NID1-202ENST00000366595 ULK4Q96C45 1275 aa17.9■□□□□ 0.46
NID1-202ENST00000366595 PRR23D1E9PI22 279 aaPredicted RBP17.89■□□□□ 0.46
NID1-202ENST00000366595 PRR23D2P0DMB1 279 aaPredicted RBP17.89■□□□□ 0.46
NID1-202ENST00000366595 CTSWP56202 376 aa17.89■□□□□ 0.46
NID1-202ENST00000366595 SARM1Q6SZW1 724 aa17.89■□□□□ 0.46
NID1-202ENST00000366595 FAM47EQ6ZV65 393 aa17.89■□□□□ 0.46
NID1-202ENST00000366595 LINC00301Q8NCQ3 95 aa17.89■□□□□ 0.46
NID1-202ENST00000366595 OSBPL9Q96SU4 736 aa17.89■□□□□ 0.46
NID1-202ENST00000366595 SENP1Q9P0U3 644 aa17.89■□□□□ 0.46
NID1-202ENST00000366595 ASAP2O43150 1006 aa17.89■□□□□ 0.45
NID1-202ENST00000366595 MYO1DO94832 1006 aa17.89■□□□□ 0.45
NID1-202ENST00000366595 ANXA13P27216 316 aa17.89■□□□□ 0.45
NID1-202ENST00000366595 INPP5AQ14642 412 aa17.89■□□□□ 0.45
NID1-202ENST00000366595 SLFN12LQ6IEE8 588 aa17.89■□□□□ 0.45
NID1-202ENST00000366595 ERICH1Q86X53 443 aa17.89■□□□□ 0.45
NID1-202ENST00000366595 TAGAPQ8N103 731 aa17.89■□□□□ 0.45
NID1-202ENST00000366595 CMTR1Q8N1G2 835 aaKnown RBP17.89■□□□□ 0.45
NID1-202ENST00000366595 MB21D1Q8N884 522 aa17.89■□□□□ 0.45
NID1-202ENST00000366595 MAP4K1Q92918 833 aa17.89■□□□□ 0.45
NID1-202ENST00000366595 PBXIP1Q96AQ6 731 aa17.89■□□□□ 0.45
NID1-202ENST00000366595 WWP1Q9H0M0 922 aa17.89■□□□□ 0.45
NID1-202ENST00000366595 C10orf88Q9H8K7 445 aa17.89■□□□□ 0.45
NID1-202ENST00000366595 PARVGQ9HBI0 331 aa17.89■□□□□ 0.45
NID1-202ENST00000366595 SFMBT1Q9UHJ3 866 aa17.89■□□□□ 0.45
NID1-202ENST00000366595 FAM187AA6NFU0 413 aa17.89■□□□□ 0.45
NID1-202ENST00000366595 FOXP2O15409 715 aa17.89■□□□□ 0.45
NID1-202ENST00000366595 SLC4A1P02730 911 aa17.89■□□□□ 0.45
NID1-202ENST00000366595 CCDC85BQ15834 202 aaPredicted RBP17.89■□□□□ 0.45
NID1-202ENST00000366595 ABCC4O15439 1325 aa17.89■□□□□ 0.45
NID1-202ENST00000366595 NEURL1BA8MQ27 555 aa17.89■□□□□ 0.45
NID1-202ENST00000366595 PMS2P54278 862 aa17.89■□□□□ 0.45
NID1-202ENST00000366595 TTLL11Q8NHH1 800 aa17.89■□□□□ 0.45
NID1-202ENST00000366595 GPBP1L1Q9HC44 474 aaPredicted RBP17.89■□□□□ 0.45
NID1-202ENST00000366595 KRT33BQ14525 404 aa17.89■□□□□ 0.45
NID1-202ENST00000366595 PLEKHM3Q6ZWE6 761 aa17.89■□□□□ 0.45
NID1-202ENST00000366595 PHF21AQ96BD5 680 aa17.89■□□□□ 0.45
NID1-202ENST00000366595 MEIS1O00470 390 aa17.88■□□□□ 0.45
NID1-202ENST00000366595 ADCK1Q86TW2 530 aa17.88■□□□□ 0.45
NID1-202ENST00000366595 LRRC47Q8N1G4 583 aaKnown RBP17.88■□□□□ 0.45
NID1-202ENST00000366595 FAM167BQ9BTA0 163 aa17.88■□□□□ 0.45
NID1-202ENST00000366595 EDEM3Q9BZQ6 932 aa17.88■□□□□ 0.45
NID1-202ENST00000366595 KLC4Q9NSK0 619 aa17.88■□□□□ 0.45
NID1-202ENST00000366595 A0A1W2PP64 1363 aa17.88■□□□□ 0.45
NID1-202ENST00000366595 INO80B-WBP1J3KQ70 363 aa17.88■□□□□ 0.45
NID1-202ENST00000366595 PSMA2P25787 234 aa17.88■□□□□ 0.45
NID1-202ENST00000366595 TFAMQ00059 246 aaKnown RBP17.88■□□□□ 0.45
NID1-202ENST00000366595 PAGR1Q9BTK6 254 aa17.88■□□□□ 0.45
NID1-202ENST00000366595 BEGAINQ9BUH8 593 aa17.88■□□□□ 0.45
NID1-202ENST00000366595 INO80BQ9C086 356 aaPredicted RBP17.88■□□□□ 0.45
NID1-202ENST00000366595 MPP6Q9NZW5 540 aa17.88■□□□□ 0.45
NID1-202ENST00000366595 SRPRBQ9Y5M8 271 aaKnown RBP17.88■□□□□ 0.45
NID1-202ENST00000366595 ZRANB2O95218 330 aaKnown RBP eCLIP17.88■□□□□ 0.45
NID1-202ENST00000366595 GSNP06396 782 aa17.88■□□□□ 0.45
NID1-202ENST00000366595 MAP4P27816 1152 aaKnown RBP17.88■□□□□ 0.45
NID1-202ENST00000366595 ABCE1P61221 599 aaKnown RBP17.88■□□□□ 0.45
NID1-202ENST00000366595 MAGOHP61326 146 aaKnown RBP17.88■□□□□ 0.45
NID1-202ENST00000366595 TBC1D9BQ66K14 1250 aa17.88■□□□□ 0.45
NID1-202ENST00000366595 ARL6IP4Q66PJ3 421 aaKnown RBP17.88■□□□□ 0.45
NID1-202ENST00000366595 RRM2BQ7LG56 351 aa17.88■□□□□ 0.45
NID1-202ENST00000366595 TGS1Q96RS0 853 aaKnown RBP17.88■□□□□ 0.45
NID1-202ENST00000366595 ATP6V0A4Q9HBG4 840 aa17.88■□□□□ 0.45
NID1-202ENST00000366595 GPR108Q9NPR9 543 aa17.88■□□□□ 0.45
NID1-202ENST00000366595 STXBP3O00186 592 aa17.88■□□□□ 0.45
NID1-202ENST00000366595 KRT16P08779 473 aa17.88■□□□□ 0.45
NID1-202ENST00000366595 EXT2Q93063 718 aa17.88■□□□□ 0.45
NID1-202ENST00000366595 BRIP1Q9BX63 1249 aa17.88■□□□□ 0.45
NID1-202ENST00000366595 ZNF408Q9H9D4 720 aa17.88■□□□□ 0.45
NID1-202ENST00000366595 ADD3Q9UEY8 706 aaKnown RBP17.88■□□□□ 0.45
NID1-202ENST00000366595 SEPT3Q9UH03 358 aa17.88■□□□□ 0.45
NID1-202ENST00000366595 LDHAP00338 332 aaKnown RBP17.87■□□□□ 0.45
NID1-202ENST00000366595 TMED10P49755 219 aaKnown RBP17.87■□□□□ 0.45
NID1-202ENST00000366595 KIF23Q02241 960 aaPredicted RBP17.87■□□□□ 0.45
NID1-202ENST00000366595 CUL3Q13618 768 aa17.87■□□□□ 0.45
NID1-202ENST00000366595 TJAP1Q5JTD0 557 aa17.87■□□□□ 0.45
NID1-202ENST00000366595 MRPS26Q9BYN8 205 aaKnown RBP17.87■□□□□ 0.45
NID1-202ENST00000366595 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms