RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 PREX1Q8TCU6 1659 aa15.03■□□□□ -0
COL6A1-201ENST00000361866 KNDC1Q76NI1 1749 aa15.02■□□□□ -0
COL6A1-201ENST00000361866 RCCD1A6NED2 376 aa15.02■□□□□ -0
COL6A1-201ENST00000361866 TAF11Q15544 211 aa15.02■□□□□ -0
COL6A1-201ENST00000361866 CDC37Q16543 378 aaPredicted RBP15.02■□□□□ -0
COL6A1-201ENST00000361866 KNOP1Q1ED39 458 aaKnown RBP15.02■□□□□ -0
COL6A1-201ENST00000361866 C6orf118Q5T5N4 469 aa15.02■□□□□ -0
COL6A1-201ENST00000361866 CEP63Q96MT8 703 aa15.02■□□□□ -0
COL6A1-201ENST00000361866 RILPQ96NA2 401 aa15.02■□□□□ -0
COL6A1-201ENST00000361866 SH2D3AQ9BRG2 576 aa15.02■□□□□ -0
COL6A1-201ENST00000361866 ANAPC5Q9UJX4 755 aa15.02■□□□□ -0
COL6A1-201ENST00000361866 TESPA1A2RU30 521 aaPredicted RBP15.02□□□□□ -0.01
COL6A1-201ENST00000361866 FAM153BP0C7A2 387 aa15.02□□□□□ -0.01
COL6A1-201ENST00000361866 PTGISQ16647 500 aa15.02□□□□□ -0.01
COL6A1-201ENST00000361866 FAM153CQ494X1 144 aa15.02□□□□□ -0.01
COL6A1-201ENST00000361866 FAM153AQ9UHL3 310 aa15.02□□□□□ -0.01
COL6A1-201ENST00000361866 STXBP3O00186 592 aa15.02□□□□□ -0.01
COL6A1-201ENST00000361866 KCNQ2O43526 872 aa15.02□□□□□ -0.01
COL6A1-201ENST00000361866 UCHL3P15374 230 aa15.02□□□□□ -0.01
COL6A1-201ENST00000361866 APBB1IPQ7Z5R6 666 aaPredicted RBP15.02□□□□□ -0.01
COL6A1-201ENST00000361866 CCDC89Q8N998 374 aa15.02□□□□□ -0.01
COL6A1-201ENST00000361866 MYCBPAPQ8TBZ2 947 aa15.02□□□□□ -0.01
COL6A1-201ENST00000361866 MAK16Q9BXY0 300 aaKnown RBP15.02□□□□□ -0.01
COL6A1-201ENST00000361866 SEMA6BQ9H3T3 888 aa15.02□□□□□ -0.01
COL6A1-201ENST00000361866 LEMD3Q9Y2U8 911 aa15.02□□□□□ -0.01
COL6A1-201ENST00000361866 KDM6AO15550 1401 aaPredicted RBP15.02□□□□□ -0.01
COL6A1-201ENST00000361866 TCRBV5S4A2TA0A5A2 114 aa15.01□□□□□ -0.01
COL6A1-201ENST00000361866 TROVE2P10155 538 aaKnown RBP eCLIP15.01□□□□□ -0.01
COL6A1-201ENST00000361866 RASSF2P50749 326 aa15.01□□□□□ -0.01
COL6A1-201ENST00000361866 IL9RQ01113 521 aa15.01□□□□□ -0.01
COL6A1-201ENST00000361866 GJB7Q6PEY0 223 aa15.01□□□□□ -0.01
COL6A1-201ENST00000361866 PALM2Q8IXS6 379 aa15.01□□□□□ -0.01
COL6A1-201ENST00000361866 TSEN2Q8NCE0 465 aaKnown RBP15.01□□□□□ -0.01
COL6A1-201ENST00000361866 GLG1Q92896 1179 aa15.01□□□□□ -0.01
COL6A1-201ENST00000361866 INTUQ9ULD6 942 aa15.01□□□□□ -0.01
COL6A1-201ENST00000361866 DIP2AQ14689 1571 aa15.01□□□□□ -0.01
COL6A1-201ENST00000361866 NSFP46459 744 aaKnown RBP15.01□□□□□ -0.01
COL6A1-201ENST00000361866 MXI1P50539 228 aa15.01□□□□□ -0.01
COL6A1-201ENST00000361866 ERFP50548 548 aa15.01□□□□□ -0.01
COL6A1-201ENST00000361866 GALCP54803 685 aa15.01□□□□□ -0.01
COL6A1-201ENST00000361866 SEPT2Q15019 361 aa15.01□□□□□ -0.01
COL6A1-201ENST00000361866 TBC1D9BQ66K14 1250 aa15.01□□□□□ -0.01
COL6A1-201ENST00000361866 TTC16Q8NEE8 873 aa15.01□□□□□ -0.01
COL6A1-201ENST00000361866 QTRT2Q9H974 415 aaKnown RBP15.01□□□□□ -0.01
COL6A1-201ENST00000361866 RGL1Q9NZL6 768 aa15.01□□□□□ -0.01
COL6A1-201ENST00000361866 EXOC7Q9UPT5 735 aa15.01□□□□□ -0.01
COL6A1-201ENST00000361866 OVOS2A0A0G2JMS6 1433 aa15.01□□□□□ -0.01
COL6A1-201ENST00000361866 GRID2IPA4D2P6 1211 aa15.01□□□□□ -0.01
COL6A1-201ENST00000361866 SYF2O95926 243 aaKnown RBP15.01□□□□□ -0.01
COL6A1-201ENST00000361866 ALAS1P13196 640 aa15.01□□□□□ -0.01
COL6A1-201ENST00000361866 CA4P22748 312 aa15.01□□□□□ -0.01
COL6A1-201ENST00000361866 ZNF34Q8IZ26 560 aa15.01□□□□□ -0.01
COL6A1-201ENST00000361866 POMGNT1Q8WZA1 660 aa15.01□□□□□ -0.01
COL6A1-201ENST00000361866 SEC16BQ96JE7 1060 aa15.01□□□□□ -0.01
COL6A1-201ENST00000361866 DBR1Q9UK59 544 aaKnown RBP15.01□□□□□ -0.01
COL6A1-201ENST00000361866 APBA3O96018 575 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 FTLP02792 175 aaPredicted RBP15□□□□□ -0.01
COL6A1-201ENST00000361866 ATP2B4P23634 1241 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 HSD17B3P37058 310 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 SLMAPQ14BN4 828 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 USP38Q8NB14 1042 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 RAB3IPQ96QF0 476 aaPredicted RBP15□□□□□ -0.01
COL6A1-201ENST00000361866 KBTBD4Q9NVX7 518 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 TXNDC16Q9P2K2 825 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 TPX2Q9ULW0 747 aaKnown RBP15□□□□□ -0.01
COL6A1-201ENST00000361866 AGLP35573 1532 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 FAM107AO95990 144 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 POLR2MP0CAP2 368 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 ADCY2Q08462 1091 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 BSPRYQ5W0U4 402 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 HAUS1Q96CS2 278 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 PITPNM3Q9BZ71 974 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15□□□□□ -0.01
COL6A1-201ENST00000361866 CIB2O75838 187 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 AKR1B1P15121 316 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 CHN1P15882 459 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 KCNJ1P48048 391 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 PRMT1Q99873 361 aaKnown RBP15□□□□□ -0.01
COL6A1-201ENST00000361866 ZNF577Q9BSK1 485 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 C1orf112Q9NSG2 853 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 TTC7AQ9ULT0 858 aaPredicted RBP15□□□□□ -0.01
COL6A1-201ENST00000361866 BRAFP15056 766 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 NMT1P30419 496 aaKnown RBP15□□□□□ -0.01
COL6A1-201ENST00000361866 DYNLT1P63172 113 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 ARHGAP4P98171 946 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 ADGRF4Q8IZF3 695 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 C1orf54Q8WWF1 131 aa15□□□□□ -0.01
COL6A1-201ENST00000361866 TYW1Q9NV66 732 aaKnown RBP15□□□□□ -0.01
COL6A1-201ENST00000361866 ITSN1Q15811 1721 aa14.99□□□□□ -0.01
COL6A1-201ENST00000361866 EXOC1LA0A1B0GW35 172 aa14.99□□□□□ -0.01
COL6A1-201ENST00000361866 ABCB5Q2M3G0 1257 aa14.99□□□□□ -0.01
COL6A1-201ENST00000361866 PPP4R3CPQ6ZMV5 832 aa14.99□□□□□ -0.01
COL6A1-201ENST00000361866 ARHGEF18Q6ZSZ5 1173 aa14.99□□□□□ -0.01
COL6A1-201ENST00000361866 KIF2BQ8N4N8 673 aa14.99□□□□□ -0.01
COL6A1-201ENST00000361866 CFAP61Q8NHU2 1237 aa14.99□□□□□ -0.01
COL6A1-201ENST00000361866 NT5C1BQ96P26 610 aa14.99□□□□□ -0.01
COL6A1-201ENST00000361866 RIOK1Q9BRS2 568 aaKnown RBP14.99□□□□□ -0.01
COL6A1-201ENST00000361866 DBNDD1Q9H9R9 158 aa14.99□□□□□ -0.01
COL6A1-201ENST00000361866 SLC40A1Q9NP59 571 aa14.99□□□□□ -0.01
COL6A1-201ENST00000361866 TCP10L2B9ZVM9 353 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms