RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 CSRNP1Q96S65 589 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 CCT8L2Q96SF2 557 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 PDGFDQ9GZP0 370 aaPredicted RBP17.7■□□□□ 0.42
IFT140-201ENST00000361339 TMX4Q9H1E5 349 aaPredicted RBP17.7■□□□□ 0.42
IFT140-201ENST00000361339 GOLPH3Q9H4A6 298 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 CHUKO15111 745 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 GCFC2P16383 781 aaKnown RBP17.7■□□□□ 0.42
IFT140-201ENST00000361339 GIT2Q14161 759 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 CTTNQ14247 550 aaKnown RBP17.7■□□□□ 0.42
IFT140-201ENST00000361339 ASTE1Q2TB18 679 aaPredicted RBP17.7■□□□□ 0.42
IFT140-201ENST00000361339 HYIQ5T013 277 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 STRIP1Q5VSL9 837 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 C8orf74Q6P047 294 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 CCDC174Q6PII3 467 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 EPB41L5Q9HCM4 733 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 GOLGA6L7A0A1B0GV03 622 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 CLIC2O15247 247 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 SLC9A1P19634 815 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 CASP4P49662 377 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 RAPGEF1Q13905 1077 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 SPRED3Q2MJR0 410 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 SYDE2Q5VT97 1194 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 CCDC65Q8IXS2 484 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 OR2W6PQ8NHA6 318 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 DCAF4Q8WV16 495 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 TBC1D31Q96DN5 1066 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 AMNQ9BXJ7 453 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 IDI2Q9BXS1 227 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 BHMT2Q9H2M3 363 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 VEZTQ9HBM0 779 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 SLC40A1Q9NP59 571 aa17.7■□□□□ 0.42
IFT140-201ENST00000361339 RBM12Q9NTZ6 932 aaKnown RBP17.7■□□□□ 0.42
IFT140-201ENST00000361339 AJAP1Q9UKB5 411 aaPredicted RBP17.7■□□□□ 0.42
IFT140-201ENST00000361339 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.7■□□□□ 0.42
IFT140-201ENST00000361339 NR2F2P24468 414 aa17.69■□□□□ 0.42
IFT140-201ENST00000361339 PSMD2Q13200 908 aa17.69■□□□□ 0.42
IFT140-201ENST00000361339 IQCEQ6IPM2 695 aa17.69■□□□□ 0.42
IFT140-201ENST00000361339 TRIM59Q8IWR1 403 aa17.69■□□□□ 0.42
IFT140-201ENST00000361339 BMP2KQ9NSY1 1161 aaPredicted RBP17.69■□□□□ 0.42
IFT140-201ENST00000361339 SNX12Q9UMY4 172 aa17.69■□□□□ 0.42
IFT140-201ENST00000361339 CDK17Q00537 523 aa17.69■□□□□ 0.42
IFT140-201ENST00000361339 GJB7Q6PEY0 223 aa17.69■□□□□ 0.42
IFT140-201ENST00000361339 RPGRIP1Q96KN7 1286 aa17.69■□□□□ 0.42
IFT140-201ENST00000361339 NT5C3AQ9H0P0 336 aa17.69■□□□□ 0.42
IFT140-201ENST00000361339 HAUS2Q9NVX0 235 aa17.69■□□□□ 0.42
IFT140-201ENST00000361339 ZBTB12Q9Y330 459 aaPredicted RBP17.69■□□□□ 0.42
IFT140-201ENST00000361339 FTCDO95954 541 aa17.68■□□□□ 0.42
IFT140-201ENST00000361339 CFBP00751 764 aa17.68■□□□□ 0.42
IFT140-201ENST00000361339 NR1D1P20393 614 aa17.68■□□□□ 0.42
IFT140-201ENST00000361339 TMEM179Q6ZVK1 233 aa17.68■□□□□ 0.42
IFT140-201ENST00000361339 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.68■□□□□ 0.42
IFT140-201ENST00000361339 GLIS2Q9BZE0 524 aaPredicted RBP17.68■□□□□ 0.42
IFT140-201ENST00000361339 STIM2Q9P246 746 aa17.68■□□□□ 0.42
IFT140-201ENST00000361339 PRR12Q9ULL5 1215 aa17.68■□□□□ 0.42
IFT140-201ENST00000361339 BCS1LQ9Y276 419 aa17.68■□□□□ 0.42
IFT140-201ENST00000361339 A0A087X0T9 212 aa17.68■□□□□ 0.42
IFT140-201ENST00000361339 ZNF233A6NK53 670 aa17.68■□□□□ 0.42
IFT140-201ENST00000361339 SPDYE3A6NKU9 549 aa17.68■□□□□ 0.42
IFT140-201ENST00000361339 GLI1P08151 1106 aa17.68■□□□□ 0.42
IFT140-201ENST00000361339 FAM228BP0C875 321 aa17.68■□□□□ 0.42
IFT140-201ENST00000361339 USP11P51784 963 aa17.68■□□□□ 0.42
IFT140-201ENST00000361339 EPHB4P54760 987 aa17.68■□□□□ 0.42
IFT140-201ENST00000361339 NLRP14Q86W24 1093 aa17.68■□□□□ 0.42
IFT140-201ENST00000361339 ADAMTS1Q9UHI8 967 aa17.68■□□□□ 0.42
IFT140-201ENST00000361339 KDM3AQ9Y4C1 1321 aa17.68■□□□□ 0.42
IFT140-201ENST00000361339 BMP3P12645 472 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 TMOD1P28289 359 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 CLNS1AP54105 237 aaKnown RBP17.67■□□□□ 0.42
IFT140-201ENST00000361339 KCNH2Q12809 1159 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 NAA25Q14CX7 972 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 HAUS3Q68CZ6 603 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 ZNF662Q6ZS27 426 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 MIGA2Q7L4E1 593 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 OSBPL9Q96SU4 736 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 WDR18Q9BV38 432 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 KCNG1Q9UIX4 513 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 CYP3A7-CYP3A51PA0A087WV96 503 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 C21orf2O43822 256 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 RAD17O75943 681 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 CYP3A7P24462 503 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 DCAF17Q5H9S7 520 aaPredicted RBP17.67■□□□□ 0.42
IFT140-201ENST00000361339 CCDC121Q6ZUS5 278 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 EHBP1Q8NDI1 1231 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 MBOAT7Q96N66 472 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 TLR10Q9BXR5 811 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 EPN3Q9H201 632 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 FBXO28Q9NVF7 368 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 TACC1O75410 805 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 FSBPO95073 299 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 FGFR1OPO95684 399 aaKnown RBP17.67■□□□□ 0.42
IFT140-201ENST00000361339 KLRC1P26715 233 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 PAFAH1B1P43034 410 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 ZC2HC1CQ53FD0 456 aaPredicted RBP17.67■□□□□ 0.42
IFT140-201ENST00000361339 ODF2Q5BJF6 829 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 MICALCLQ6ZW33 695 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 MYCBPAPQ8TBZ2 947 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 MIEF2Q96C03 454 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 VAV3Q9UKW4 847 aa17.67■□□□□ 0.42
IFT140-201ENST00000361339 H0YIN7 160 aa17.66■□□□□ 0.42
IFT140-201ENST00000361339 USO1O60763 962 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms