RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 DIAPH2O60879 1101 aa16.23■□□□□ 0.19
UBAP1-202ENST00000359544 MIGA1Q8NAN2 632 aa16.23■□□□□ 0.19
UBAP1-202ENST00000359544 TANGO6Q9C0B7 1094 aa16.23■□□□□ 0.19
UBAP1-202ENST00000359544 TMEM60Q9H2L4 133 aa16.23■□□□□ 0.19
UBAP1-202ENST00000359544 CCDC134Q9H6E4 229 aa16.23■□□□□ 0.19
UBAP1-202ENST00000359544 PANK4Q9NVE7 773 aa16.23■□□□□ 0.19
UBAP1-202ENST00000359544 CPSF2Q9P2I0 782 aaKnown RBP16.23■□□□□ 0.19
UBAP1-202ENST00000359544 UTP11Q9Y3A2 253 aaKnown RBP16.23■□□□□ 0.19
UBAP1-202ENST00000359544 FLT1P17948 1338 aa16.23■□□□□ 0.19
UBAP1-202ENST00000359544 MYH1P12882 1939 aa16.23■□□□□ 0.19
UBAP1-202ENST00000359544 DAPK3O43293 454 aa16.23■□□□□ 0.19
UBAP1-202ENST00000359544 FLT3P36888 993 aa16.23■□□□□ 0.19
UBAP1-202ENST00000359544 BLMHQ13867 455 aa16.23■□□□□ 0.19
UBAP1-202ENST00000359544 FAM133BQ5BKY9 247 aaKnown RBP16.23■□□□□ 0.19
UBAP1-202ENST00000359544 GBP7Q8N8V2 638 aaPredicted RBP16.23■□□□□ 0.19
UBAP1-202ENST00000359544 LRRC15Q8TF66 581 aa16.23■□□□□ 0.19
UBAP1-202ENST00000359544 ATXN2LQ8WWM7 1075 aaKnown RBP16.23■□□□□ 0.19
UBAP1-202ENST00000359544 SEC14L1Q92503 715 aa16.23■□□□□ 0.19
UBAP1-202ENST00000359544 TBC1D5Q92609 795 aa16.23■□□□□ 0.19
UBAP1-202ENST00000359544 NMRK2Q9NPI5 230 aa16.23■□□□□ 0.19
UBAP1-202ENST00000359544 NLRC4Q9NPP4 1024 aa16.23■□□□□ 0.19
UBAP1-202ENST00000359544 PNMA2Q9UL42 364 aa16.23■□□□□ 0.19
UBAP1-202ENST00000359544 KRIT1O00522 736 aa16.22■□□□□ 0.19
UBAP1-202ENST00000359544 PPFIA2O75334 1257 aa16.22■□□□□ 0.19
UBAP1-202ENST00000359544 MMP13P45452 471 aa16.22■□□□□ 0.19
UBAP1-202ENST00000359544 FAM83BQ5T0W9 1011 aa16.22■□□□□ 0.19
UBAP1-202ENST00000359544 FAM205AQ6ZU69 1335 aa16.22■□□□□ 0.19
UBAP1-202ENST00000359544 LARGE2Q8N3Y3 721 aa16.22■□□□□ 0.19
UBAP1-202ENST00000359544 TSG101Q99816 390 aa16.22■□□□□ 0.19
UBAP1-202ENST00000359544 SELENOSQ9BQE4 189 aa16.22■□□□□ 0.19
UBAP1-202ENST00000359544 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.22■□□□□ 0.19
UBAP1-202ENST00000359544 MINPP1Q9UNW1 487 aa16.22■□□□□ 0.19
UBAP1-202ENST00000359544 NOC2LQ9Y3T9 749 aaKnown RBP16.22■□□□□ 0.19
UBAP1-202ENST00000359544 PECAM1P16284 738 aaPredicted RBP16.22■□□□□ 0.19
UBAP1-202ENST00000359544 MKRN4PQ13434 485 aaPredicted RBP16.22■□□□□ 0.19
UBAP1-202ENST00000359544 CROCCP2Q86T23 111 aa16.22■□□□□ 0.19
UBAP1-202ENST00000359544 GUF1Q8N442 669 aaKnown RBP16.22■□□□□ 0.19
UBAP1-202ENST00000359544 PGM2Q96G03 612 aa16.22■□□□□ 0.19
UBAP1-202ENST00000359544 DDX47Q9H0S4 455 aaKnown RBP16.22■□□□□ 0.19
UBAP1-202ENST00000359544 ZNF541Q9H0D2 1346 aa16.21■□□□□ 0.19
UBAP1-202ENST00000359544 MYH3P11055 1940 aa16.21■□□□□ 0.19
UBAP1-202ENST00000359544 ADAMTS3O15072 1205 aa16.21■□□□□ 0.19
UBAP1-202ENST00000359544 TLR2O60603 784 aa16.21■□□□□ 0.19
UBAP1-202ENST00000359544 DDNO94850 711 aaPredicted RBP16.21■□□□□ 0.19
UBAP1-202ENST00000359544 KIF5BP33176 963 aa16.21■□□□□ 0.19
UBAP1-202ENST00000359544 DOK7Q18PE1 504 aa16.21■□□□□ 0.19
UBAP1-202ENST00000359544 FOXR2Q6PJQ5 311 aa16.21■□□□□ 0.19
UBAP1-202ENST00000359544 LRRC34Q8IZ02 419 aa16.21■□□□□ 0.19
UBAP1-202ENST00000359544 TEX9Q8N6V9 391 aa16.21■□□□□ 0.19
UBAP1-202ENST00000359544 IFT74Q96LB3 600 aa16.21■□□□□ 0.19
UBAP1-202ENST00000359544 ELAC2Q9BQ52 826 aaKnown RBP16.21■□□□□ 0.19
UBAP1-202ENST00000359544 AP1M1Q9BXS5 423 aa16.21■□□□□ 0.19
UBAP1-202ENST00000359544 LRP2BPQ9P2M1 347 aa16.21■□□□□ 0.19
UBAP1-202ENST00000359544 CCDC169A6NNP5 214 aa16.21■□□□□ 0.19
UBAP1-202ENST00000359544 AHCYL1O43865 530 aa16.21■□□□□ 0.19
UBAP1-202ENST00000359544 CAND2O75155 1236 aa16.21■□□□□ 0.19
UBAP1-202ENST00000359544 UFL1O94874 794 aa16.21■□□□□ 0.19
UBAP1-202ENST00000359544 NUDT17P0C025 328 aa16.21■□□□□ 0.19
UBAP1-202ENST00000359544 KLRK1P26718 216 aa16.21■□□□□ 0.19
UBAP1-202ENST00000359544 IGHMBP2P38935 993 aaKnown RBP16.21■□□□□ 0.19
UBAP1-202ENST00000359544 ALDH5A1P51649 535 aaPredicted RBP16.21■□□□□ 0.19
UBAP1-202ENST00000359544 CCNG1P51959 295 aa16.21■□□□□ 0.19
UBAP1-202ENST00000359544 KCNMA1Q12791 1236 aa16.21■□□□□ 0.19
UBAP1-202ENST00000359544 SPDYE1Q8NFV5 336 aaPredicted RBP16.21■□□□□ 0.19
UBAP1-202ENST00000359544 TBC1D16Q8TBP0 767 aa16.21■□□□□ 0.19
UBAP1-202ENST00000359544 SDR42E1Q8WUS8 393 aa16.21■□□□□ 0.19
UBAP1-202ENST00000359544 FMO2Q99518 471 aa16.21■□□□□ 0.19
UBAP1-202ENST00000359544 GPBP1L1Q9HC44 474 aaPredicted RBP16.21■□□□□ 0.19
UBAP1-202ENST00000359544 KCNQ5Q9NR82 932 aa16.21■□□□□ 0.19
UBAP1-202ENST00000359544 INTS9Q9NV88 658 aaKnown RBP16.21■□□□□ 0.19
UBAP1-202ENST00000359544 LTBP3Q9NS15 1303 aa16.2■□□□□ 0.18
UBAP1-202ENST00000359544 PVALEFA0A1B0GWK0 134 aa16.2■□□□□ 0.18
UBAP1-202ENST00000359544 FESP07332 822 aa16.2■□□□□ 0.18
UBAP1-202ENST00000359544 NEFHP12036 1026 aa16.2■□□□□ 0.18
UBAP1-202ENST00000359544 NCALDP61601 193 aa16.2■□□□□ 0.18
UBAP1-202ENST00000359544 KLHL30Q0D2K2 578 aa16.2■□□□□ 0.18
UBAP1-202ENST00000359544 CC2D2BQ6DHV5 1058 aa16.2■□□□□ 0.18
UBAP1-202ENST00000359544 GALNT17Q6IS24 598 aa16.2■□□□□ 0.18
UBAP1-202ENST00000359544 UNC13DQ70J99 1090 aa16.2■□□□□ 0.18
UBAP1-202ENST00000359544 PARD3BQ8TEW8 1205 aa16.2■□□□□ 0.18
UBAP1-202ENST00000359544 RAB17Q9H0T7 212 aa16.2■□□□□ 0.18
UBAP1-202ENST00000359544 DBNDD1Q9H9R9 158 aa16.2■□□□□ 0.18
UBAP1-202ENST00000359544 BSDC1Q9NW68 430 aaPredicted RBP16.2■□□□□ 0.18
UBAP1-202ENST00000359544 A0A087X0T9 212 aa16.2■□□□□ 0.18
UBAP1-202ENST00000359544 MAGEB6P1A0A0J9YX57 407 aa16.2■□□□□ 0.18
UBAP1-202ENST00000359544 ENO4A6NNW6 628 aa16.2■□□□□ 0.18
UBAP1-202ENST00000359544 VIMP08670 466 aaKnown RBP16.2■□□□□ 0.18
UBAP1-202ENST00000359544 FGRP09769 529 aa16.2■□□□□ 0.18
UBAP1-202ENST00000359544 FAM228BP0C875 321 aa16.2■□□□□ 0.18
UBAP1-202ENST00000359544 ATP2A2P16615 1042 aaKnown RBP16.2■□□□□ 0.18
UBAP1-202ENST00000359544 CYP7A1P22680 504 aa16.2■□□□□ 0.18
UBAP1-202ENST00000359544 LACTBP83111 547 aaPredicted RBP16.2■□□□□ 0.18
UBAP1-202ENST00000359544 ASIC2Q16515 512 aa16.2■□□□□ 0.18
UBAP1-202ENST00000359544 LRRC55Q6ZSA7 311 aa16.2■□□□□ 0.18
UBAP1-202ENST00000359544 RASGEF1CQ8N431 466 aa16.2■□□□□ 0.18
UBAP1-202ENST00000359544 LSM14BQ9BX40 385 aaKnown RBP16.2■□□□□ 0.18
UBAP1-202ENST00000359544 ECT2Q9H8V3 914 aa16.2■□□□□ 0.18
UBAP1-202ENST00000359544 AMACRQ9UHK6 382 aa16.2■□□□□ 0.18
UBAP1-202ENST00000359544 AGAP1Q9UPQ3 857 aa16.2■□□□□ 0.18
UBAP1-202ENST00000359544 ATP8A1Q9Y2Q0 1164 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms