RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 RERGLQ9H628 205 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 POTEB3A0JP26 581 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 POTECB2RU33 542 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 GSTA4O15217 222 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 PBLDP30039 288 aaPredicted RBP7.92□□□□□ -1.14
VPS13A-202ENST00000357409 OCRLQ01968 901 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 POTEBQ6S5H4 581 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 ANKMY2Q8IV38 441 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 HS6ST3Q8IZP7 471 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 SMYD3Q9H7B4 428 aa7.92□□□□□ -1.14
VPS13A-202ENST00000357409 TPX2Q9ULW0 747 aaKnown RBP7.92□□□□□ -1.14
VPS13A-202ENST00000357409 TSPAN3O60637 253 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 YY1P25490 414 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 MCAMP43121 646 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 DNAJC24Q6P3W2 148 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 SCYL3Q8IZE3 742 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 ELMOD1Q8N336 334 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 PSPC1Q8WXF1 523 aaKnown RBP7.91□□□□□ -1.14
VPS13A-202ENST00000357409 CCDC94Q9BW85 323 aaPredicted RBP7.91□□□□□ -1.14
VPS13A-202ENST00000357409 SHCBP1LQ9BZQ2 653 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 GGA3Q9NZ52 723 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 EPN1Q9Y6I3 576 aaPredicted RBP7.91□□□□□ -1.14
VPS13A-202ENST00000357409 CAPN7Q9Y6W3 813 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 POTEFA5A3E0 1075 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 POTEIP0CG38 1075 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 BTKQ06187 659 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 PWP1Q13610 501 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 HS1BP3Q53T59 392 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 PLA2G4FQ68DD2 849 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 POTEGQ6S5H5 508 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 POTEEQ6S8J3 1075 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 TMEM270Q6UE05 265 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 SMC5Q8IY18 1101 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 BBS5Q8N3I7 341 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 AFAP1L2Q8N4X5 818 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 LRRC8CQ8TDW0 803 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 PNKPQ96T60 521 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 DNAJC7Q99615 494 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 GTSE1Q9NYZ3 720 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 TIMM13Q9Y5L4 95 aaPredicted RBP7.91□□□□□ -1.14
VPS13A-202ENST00000357409 BBOX1O75936 387 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 ACSL3O95573 720 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 EEF1B2P24534 225 aaKnown RBP7.91□□□□□ -1.14
VPS13A-202ENST00000357409 TMPRSS15P98073 1019 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 IMPG1Q17R60 797 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 GJD4Q96KN9 370 aaPredicted RBP7.91□□□□□ -1.14
VPS13A-202ENST00000357409 CERS4Q9HA82 394 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 PRPSAP2O60256 369 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 APOEP02649 317 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 SLC25A41Q8N5S1 370 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 ATP11CQ8NB49 1132 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 GPT2Q8TD30 523 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 BAATQ14032 418 aaPredicted RBP7.91□□□□□ -1.14
VPS13A-202ENST00000357409 ADGRF4Q8IZF3 695 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 TTC8Q8TAM2 541 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 NOVA2Q9UNW9 492 aaKnown RBP7.91□□□□□ -1.14
VPS13A-202ENST00000357409 MTMR6Q9Y217 621 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 KDM3AQ9Y4C1 1321 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 NCK2O43639 380 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 FCER1AP12319 257 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 POLR2BP30876 1174 aaKnown RBP7.91□□□□□ -1.14
VPS13A-202ENST00000357409 PRG3Q9Y2Y8 225 aaPredicted RBP7.91□□□□□ -1.14
VPS13A-202ENST00000357409 FOXN1O15353 648 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 XPOTO43592 962 aaKnown RBP7.91□□□□□ -1.14
VPS13A-202ENST00000357409 NDUFB5O43674 189 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 INPP5BP32019 993 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 RECQLP46063 649 aaPredicted RBP7.91□□□□□ -1.14
VPS13A-202ENST00000357409 DBN1Q16643 649 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 BRINP3Q76B58 766 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 BCAS4Q8TDM0 211 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 EGFL8Q99944 293 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 CCDC90BQ9GZT6 254 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 ZMYM6O95789 1325 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 ZC3H4Q9UPT8 1303 aaKnown RBP7.91□□□□□ -1.14
VPS13A-202ENST00000357409 PSMA2P25787 234 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 SLC10A5Q5PT55 438 aa7.91□□□□□ -1.14
VPS13A-202ENST00000357409 POLR3CQ9BUI4 534 aaPredicted RBP7.91□□□□□ -1.14
VPS13A-202ENST00000357409 WDR17Q8IZU2 1322 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 PSAPP07602 524 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 LMNB1P20700 586 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 NMT1P30419 496 aaKnown RBP7.9□□□□□ -1.14
VPS13A-202ENST00000357409 MUM1Q2TAK8 710 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 ZNF280CQ8ND82 737 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 UNKQ9C0B0 810 aaKnown RBP7.9□□□□□ -1.14
VPS13A-202ENST00000357409 TROVE2P10155 538 aaKnown RBP eCLIP7.9□□□□□ -1.14
VPS13A-202ENST00000357409 KRT3P12035 628 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 EPC2Q52LR7 807 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 APOA5Q6Q788 366 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 ST13P5Q8NFI4 369 aaPredicted RBP7.9□□□□□ -1.14
VPS13A-202ENST00000357409 FAM161BQ96MY7 647 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 C11orf70Q9BRQ4 267 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 USP14P54578 494 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 PPP2R5BQ15173 497 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 RNF10Q8N5U6 811 aaKnown RBP7.9□□□□□ -1.14
VPS13A-202ENST00000357409 EFHBQ8N7U6 833 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 KIFC3Q9BVG8 833 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 DYRK4Q9NR20 520 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 PLS3P13797 630 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 AKR1B1P15121 316 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 MSH2P43246 934 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms