RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 BTDP43251 543 aa8.96□□□□□ -0.97
CDC42SE1-201ENST00000357235 SF3B3Q15393 1217 aaKnown RBP8.96□□□□□ -0.97
CDC42SE1-201ENST00000357235 MSL1Q68DK7 614 aa8.96□□□□□ -0.97
CDC42SE1-201ENST00000357235 ALKBH5Q6P6C2 394 aaKnown RBP8.96□□□□□ -0.97
CDC42SE1-201ENST00000357235 POTEBQ6S5H4 581 aa8.96□□□□□ -0.97
CDC42SE1-201ENST00000357235 C6orf89Q6UWU4 347 aa8.96□□□□□ -0.97
CDC42SE1-201ENST00000357235 ARFGAP2Q8N6H7 521 aa8.96□□□□□ -0.97
CDC42SE1-201ENST00000357235 MDM1Q8TC05 714 aa8.96□□□□□ -0.97
CDC42SE1-201ENST00000357235 RUBCNQ92622 972 aa8.96□□□□□ -0.97
CDC42SE1-201ENST00000357235 NGLY1Q96IV0 654 aa8.96□□□□□ -0.97
CDC42SE1-201ENST00000357235 TSC22D3Q99576 134 aa8.96□□□□□ -0.97
CDC42SE1-201ENST00000357235 SPZ1Q9BXG8 430 aa8.96□□□□□ -0.97
CDC42SE1-201ENST00000357235 CCDC113Q9H0I3 377 aa8.96□□□□□ -0.97
CDC42SE1-201ENST00000357235 NEUROG2Q9H2A3 272 aa8.96□□□□□ -0.97
CDC42SE1-201ENST00000357235 EBF2Q9HAK2 575 aa8.96□□□□□ -0.97
CDC42SE1-201ENST00000357235 ZNF287Q9HBT7 754 aa8.96□□□□□ -0.97
CDC42SE1-201ENST00000357235 TTI1O43156 1089 aa8.96□□□□□ -0.98
CDC42SE1-201ENST00000357235 FERP16591 822 aa8.96□□□□□ -0.98
CDC42SE1-201ENST00000357235 STAT3P40763 770 aa8.96□□□□□ -0.98
CDC42SE1-201ENST00000357235 ROR2Q01974 943 aaKnown RBP8.96□□□□□ -0.98
CDC42SE1-201ENST00000357235 DHX9Q08211 1270 aaKnown RBP8.96□□□□□ -0.98
CDC42SE1-201ENST00000357235 QPCTQ16769 361 aa8.96□□□□□ -0.98
CDC42SE1-201ENST00000357235 GNPTABQ3T906 1256 aa8.96□□□□□ -0.98
CDC42SE1-201ENST00000357235 LZTS2Q9BRK4 669 aa8.96□□□□□ -0.98
CDC42SE1-201ENST00000357235 EMILIN3Q9NT22 766 aa8.96□□□□□ -0.98
CDC42SE1-201ENST00000357235 NOC2LQ9Y3T9 749 aaKnown RBP8.96□□□□□ -0.98
CDC42SE1-201ENST00000357235 BCORQ6W2J9 1755 aa8.96□□□□□ -0.98
CDC42SE1-201ENST00000357235 GMNCA6NCL1 334 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 DNM1LO00429 736 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 CETN3O15182 167 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 ANP32DO95626 131 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 ATP6V1G2O95670 118 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 IMPDH2P12268 514 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 CDC25CP30307 473 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 XRCC4Q13426 336 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 PDIA5Q14554 519 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 GJB7Q6PEY0 223 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 ZNF571Q7Z3V5 609 aaPredicted RBP8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 NCAPG2Q86XI2 1143 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 CCDC65Q8IXS2 484 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 METTL13Q8N6R0 699 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 LRRC45Q96CN5 670 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 MTMR9Q96QG7 549 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 SELENOSQ9BQE4 189 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 TMBIM4Q9HC24 238 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 DOCK2Q92608 1830 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 SPDYE3A6NKU9 549 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 PGRMC1O00264 195 aaKnown RBP8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 ECEL1O95672 775 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 FAM163BP0C2L3 166 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 PYGBP11216 843 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 TNFRSF8P28908 595 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 ZNF844Q08AG5 666 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 USP4Q13107 963 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 ANKRD20A8PQ5CZ79 823 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 U2AF1L4Q8WU68 220 aaKnown RBP8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 EPAS1Q99814 870 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 TRIM51Q9BSJ1 452 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 OSBPL7Q9BZF2 842 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 ANKRD2Q9GZV1 360 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 HDAC9Q9UKV0 1011 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 PCDHB13Q9Y5F0 798 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 CACNA1SQ13698 1873 aa8.95□□□□□ -0.98
CDC42SE1-201ENST00000357235 PHLPP1O60346 1717 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 POTEFA5A3E0 1075 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 USP17L15C9J2P7 530 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 USP17L13C9JLJ4 530 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 USP17L11C9JVI0 530 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 USP17L18D6R9N7 530 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 USP17L22D6RA61 530 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 USP17L17D6RBQ6 530 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 USP17L19D6RCP7 530 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 USP17L20D6RJB6 530 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 CLIC2O15247 247 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 SMIM24O75264 130 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 PLA2G4BP0C869 781 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 POTEIP0CG38 1075 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 SCTRP47872 440 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 USP17L24Q0WX57 530 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 PABPC4Q13310 644 aaKnown RBP eCLIP8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 NFIXQ14938 502 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 LLGL1Q15334 1064 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 UAP1Q16222 522 aaPredicted RBP8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 EXOC3L4Q17RC7 722 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 SPRED3Q2MJR0 410 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 TTBK2Q6IQ55 1244 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 USP17L6PQ6QN14 398 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 POTEGQ6S5H5 508 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 POTEEQ6S8J3 1075 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 FAM81AQ8TBF8 368 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 LRRC27Q9C0I9 530 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 ISCUQ9H1K1 167 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 SPATA31A6Q5VVP1 1343 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 PAPPAQ13219 1627 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 HGSO14964 777 aaPredicted RBP8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 GFPT2O94808 682 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 FGGP02679 453 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 GNAT1P11488 350 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 UCHL3P15374 230 aa8.94□□□□□ -0.98
CDC42SE1-201ENST00000357235 HSPA9P38646 679 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms