RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 PSMD14O00487 310 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 ALCAMQ13740 583 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 GRM4Q14833 912 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 FBXW10Q5XX13 1052 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 TMED8Q6PL24 325 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 RNF168Q8IYW5 571 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 METTL13Q8N6R0 699 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 CEP170P1Q96L14 293 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 CNOT8Q9UFF9 292 aaKnown RBP16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 ANAPC7Q9UJX3 599 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 AFG3L2Q9Y4W6 797 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 SSU72P8A0A1W2PR75 194 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 NBPF26B4DH59 902 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 NBPF15Q8N660 670 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 SYT2Q8N9I0 419 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 PIGOQ8TEQ8 1089 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 SAYSD1Q9NPB0 183 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 ANGPTL2Q9UKU9 493 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 CFAP73A6NFT4 308 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 USP17L5A8MUK1 530 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 PLS3P13797 630 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 SAT1P21673 171 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 DRP2Q13474 957 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 SYDE2Q5VT97 1194 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 PAXIP1Q6ZW49 1069 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 SRBD1Q8N5C6 995 aaKnown RBP16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 SLC44A5Q8NCS7 719 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 TSC22D3Q99576 134 aa16.78■□□□□ 0.28
TRAPPC11-202ENST00000357207 USP31Q70CQ4 1352 aa16.77■□□□□ 0.28
TRAPPC11-202ENST00000357207 SORBS3O60504 671 aa16.77■□□□□ 0.28
TRAPPC11-202ENST00000357207 PFDN1O60925 122 aa16.77■□□□□ 0.28
TRAPPC11-202ENST00000357207 BBOX1O75936 387 aa16.77■□□□□ 0.28
TRAPPC11-202ENST00000357207 CPP00450 1065 aa16.77■□□□□ 0.28
TRAPPC11-202ENST00000357207 AP3B2Q13367 1082 aa16.77■□□□□ 0.28
TRAPPC11-202ENST00000357207 SH3RF3Q8TEJ3 882 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC11-202ENST00000357207 SLC7A3Q8WY07 619 aa16.77■□□□□ 0.28
TRAPPC11-202ENST00000357207 TRIM55Q9BYV6 548 aa16.77■□□□□ 0.28
TRAPPC11-202ENST00000357207 POTEB3A0JP26 581 aa16.77■□□□□ 0.28
TRAPPC11-202ENST00000357207 GOLGA8IPA6NC78 632 aa16.77■□□□□ 0.28
TRAPPC11-202ENST00000357207 GOLGA8JA6NMD2 632 aa16.77■□□□□ 0.28
TRAPPC11-202ENST00000357207 POTECB2RU33 542 aa16.77■□□□□ 0.28
TRAPPC11-202ENST00000357207 GDF11O95390 407 aa16.77■□□□□ 0.28
TRAPPC11-202ENST00000357207 PDE6BP35913 854 aa16.77■□□□□ 0.28
TRAPPC11-202ENST00000357207 NR1H3Q13133 447 aa16.77■□□□□ 0.28
TRAPPC11-202ENST00000357207 POTEBQ6S5H4 581 aa16.77■□□□□ 0.28
TRAPPC11-202ENST00000357207 CSRNP1Q96S65 589 aa16.77■□□□□ 0.28
TRAPPC11-202ENST00000357207 PHF20Q9BVI0 1012 aa16.77■□□□□ 0.28
TRAPPC11-202ENST00000357207 NRBP2Q9NSY0 501 aa16.77■□□□□ 0.28
TRAPPC11-202ENST00000357207 STOML1Q9UBI4 398 aa16.77■□□□□ 0.28
TRAPPC11-202ENST00000357207 NAALADL2Q58DX5 795 aa16.77■□□□□ 0.27
TRAPPC11-202ENST00000357207 ZNF473Q8WTR7 871 aaKnown RBP16.77■□□□□ 0.27
TRAPPC11-202ENST00000357207 NSMCE1Q8WV22 266 aa16.77■□□□□ 0.27
TRAPPC11-202ENST00000357207 DDX27Q96GQ7 796 aaKnown RBP16.77■□□□□ 0.27
TRAPPC11-202ENST00000357207 DHX36Q9H2U1 1008 aaKnown RBP16.77■□□□□ 0.27
TRAPPC11-202ENST00000357207 ETNK1Q9HBU6 452 aa16.77■□□□□ 0.27
TRAPPC11-202ENST00000357207 A6NJR5 290 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 GYG2O15488 501 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 ORC4O43929 436 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 LMNAP02545 664 aaKnown RBP16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 CAV1Q03135 178 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 DRAP1Q14919 205 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 MMEL1Q495T6 779 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 NME8Q8N427 588 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 POLD4Q9HCU8 107 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 THEGQ9P2T0 379 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 SEPT9Q9UHD8 586 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 INTUQ9ULD6 942 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 ALKQ9UM73 1620 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 A0A0G2JND7 137 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 CAPN9O14815 690 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 RHOBTB3O94955 611 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 HOXA13P31271 388 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 BYSLQ13895 437 aaKnown RBP16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 EPM2AIP1Q7L775 607 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 GLYCTKQ8IVS8 523 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 LRRC37BQ96QE4 947 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 NCAPGQ9BPX3 1015 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 TMEM260Q9NX78 707 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 ZBTB5O15062 677 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 SLC18A3Q16572 532 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 RNF207Q6ZRF8 634 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 RFFLQ8WZ73 363 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 MS4A14Q96JA4 679 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 ADPGKQ9BRR6 497 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 RIOK1Q9BRS2 568 aaKnown RBP16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 SEPT10Q9P0V9 454 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 IQANK1A0A1B0GTG1 560 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 USP17L15C9J2P7 530 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 USP17L13C9JLJ4 530 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 USP17L11C9JVI0 530 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 USP17L18D6R9N7 530 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 USP17L22D6RA61 530 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 USP17L17D6RBQ6 530 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 USP17L19D6RCP7 530 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 USP17L20D6RJB6 530 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 KRT14P02533 472 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 USP17L24Q0WX57 530 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 DARS2Q6PI48 645 aaKnown RBP16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 USP17L6PQ6QN14 398 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 HEMGNQ9BXL5 484 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms