RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 EMID1Q96A84 441 aaPredicted RBP20.15■□□□□ 0.82
SMARCD3-202ENST00000356800 NOP56O00567 594 aaKnown RBP20.14■□□□□ 0.81
SMARCD3-202ENST00000356800 AP5Z1O43299 807 aa20.14■□□□□ 0.81
SMARCD3-202ENST00000356800 GUCY2CP25092 1073 aa20.14■□□□□ 0.81
SMARCD3-202ENST00000356800 PRKCZQ05513 592 aa20.14■□□□□ 0.81
SMARCD3-202ENST00000356800 LAMC2Q13753 1193 aa20.14■□□□□ 0.81
SMARCD3-202ENST00000356800 XKR9Q5GH70 373 aa20.14■□□□□ 0.81
SMARCD3-202ENST00000356800 SARM1Q6SZW1 724 aa20.14■□□□□ 0.81
SMARCD3-202ENST00000356800 ENOX1Q8TC92 643 aaKnown RBP20.14■□□□□ 0.81
SMARCD3-202ENST00000356800 FGFBP2Q9BYJ0 223 aa20.14■□□□□ 0.81
SMARCD3-202ENST00000356800 HSD3B7Q9H2F3 369 aa20.14■□□□□ 0.81
SMARCD3-202ENST00000356800 ADCY5O95622 1261 aa20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 STAT5BP51692 787 aa20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 MAPK7Q13164 816 aa20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 PSMD2Q13200 908 aa20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 COBLL1Q53SF7 1204 aa20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 XKR3Q5GH77 459 aa20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 HERC4Q5GLZ8 1057 aaPredicted RBP20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 FAM26FQ5R3K3 315 aa20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 TRIM50Q86XT4 487 aa20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 DAW1Q8N136 415 aa20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 SEPT9Q9UHD8 586 aaPredicted RBP20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 CTNND2Q9UQB3 1225 aa20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 USO1O60763 962 aaKnown RBP20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 OATP04181 439 aa20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 STX17P56962 302 aa20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 TPM4P67936 248 aa20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 FAM160B1Q5W0V3 765 aa20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 OTUD6AQ7L8S5 288 aa20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 SFR1Q86XK3 245 aa20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 PPTC7Q8NI37 304 aa20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 CD99L2Q8TCZ2 262 aa20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 AFG1LQ8WV93 481 aa20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 TRIB2Q92519 343 aa20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 ZHX3Q9H4I2 956 aa20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 TBC1D7Q9P0N9 293 aa20.13■□□□□ 0.81
SMARCD3-202ENST00000356800 EMSYQ7Z589 1322 aa20.12■□□□□ 0.81
SMARCD3-202ENST00000356800 SFI1A8K8P3 1242 aa20.12■□□□□ 0.81
SMARCD3-202ENST00000356800 GPR25O00155 361 aa20.12■□□□□ 0.81
SMARCD3-202ENST00000356800 HIP1RO75146 1068 aa20.12■□□□□ 0.81
SMARCD3-202ENST00000356800 TBCAO75347 108 aaKnown RBP20.12■□□□□ 0.81
SMARCD3-202ENST00000356800 ZNF131P52739 623 aa20.12■□□□□ 0.81
SMARCD3-202ENST00000356800 TNFAIP2Q03169 654 aa20.12■□□□□ 0.81
SMARCD3-202ENST00000356800 KIF22Q14807 665 aa20.12■□□□□ 0.81
SMARCD3-202ENST00000356800 NELFBQ8WX92 580 aa20.12■□□□□ 0.81
SMARCD3-202ENST00000356800 CEP170P1Q96L14 293 aa20.12■□□□□ 0.81
SMARCD3-202ENST00000356800 CCDC43Q96MW1 224 aaKnown RBP20.12■□□□□ 0.81
SMARCD3-202ENST00000356800 ODF2LQ9ULJ1 636 aa20.12■□□□□ 0.81
SMARCD3-202ENST00000356800 NKRFO15226 690 aaKnown RBP eCLIP20.11■□□□□ 0.81
SMARCD3-202ENST00000356800 PLCB2Q00722 1185 aa20.11■□□□□ 0.81
SMARCD3-202ENST00000356800 LRRC41Q15345 812 aa20.11■□□□□ 0.81
SMARCD3-202ENST00000356800 PLPPR4Q7Z2D5 763 aa20.11■□□□□ 0.81
SMARCD3-202ENST00000356800 TRPV1Q8NER1 839 aa20.11■□□□□ 0.81
SMARCD3-202ENST00000356800 CEP89Q96ST8 783 aa20.11■□□□□ 0.81
SMARCD3-202ENST00000356800 NIFKQ9BYG3 293 aaKnown RBP20.11■□□□□ 0.81
SMARCD3-202ENST00000356800 AZI2Q9H6S1 392 aa20.11■□□□□ 0.81
SMARCD3-202ENST00000356800 CYP26B1Q9NR63 512 aa20.11■□□□□ 0.81
SMARCD3-202ENST00000356800 RWDD2AQ9UIY3 292 aa20.11■□□□□ 0.81
SMARCD3-202ENST00000356800 GNEQ9Y223 722 aaKnown RBP20.11■□□□□ 0.81
SMARCD3-202ENST00000356800 COL4A3BPQ9Y5P4 624 aa20.11■□□□□ 0.81
SMARCD3-202ENST00000356800 SYNRGQ9UMZ2 1314 aa20.11■□□□□ 0.81
SMARCD3-202ENST00000356800 FAM13AO94988 1023 aa20.1■□□□□ 0.81
SMARCD3-202ENST00000356800 PMS1P54277 932 aaKnown RBP20.1■□□□□ 0.81
SMARCD3-202ENST00000356800 PAK1Q13153 545 aa20.1■□□□□ 0.81
SMARCD3-202ENST00000356800 MAEAQ7L5Y9 396 aa20.1■□□□□ 0.81
SMARCD3-202ENST00000356800 OR6J1Q8NGC5 347 aa20.1■□□□□ 0.81
SMARCD3-202ENST00000356800 GLG1Q92896 1179 aa20.1■□□□□ 0.81
SMARCD3-202ENST00000356800 LENG1Q96BZ8 264 aaPredicted RBP20.1■□□□□ 0.81
SMARCD3-202ENST00000356800 PDLIM7Q9NR12 457 aa20.1■□□□□ 0.81
SMARCD3-202ENST00000356800 GAP43P17677 238 aa20.1■□□□□ 0.81
SMARCD3-202ENST00000356800 PPP1R2P41236 205 aa20.1■□□□□ 0.81
SMARCD3-202ENST00000356800 CASP5P51878 434 aa20.1■□□□□ 0.81
SMARCD3-202ENST00000356800 MTERF2Q49AM1 385 aa20.1■□□□□ 0.81
SMARCD3-202ENST00000356800 GUF1Q8N442 669 aaKnown RBP20.1■□□□□ 0.81
SMARCD3-202ENST00000356800 DHTKD1Q96HY7 919 aaPredicted RBP20.1■□□□□ 0.81
SMARCD3-202ENST00000356800 FIZ1Q96SL8 496 aa20.1■□□□□ 0.81
SMARCD3-202ENST00000356800 PARVGQ9HBI0 331 aa20.1■□□□□ 0.81
SMARCD3-202ENST00000356800 FANCLQ9NW38 375 aa20.1■□□□□ 0.81
SMARCD3-202ENST00000356800 SAGE1Q9NXZ1 904 aa20.1■□□□□ 0.81
SMARCD3-202ENST00000356800 NFE2L3Q9Y4A8 694 aa20.1■□□□□ 0.81
SMARCD3-202ENST00000356800 TRIM49BA6NDI0 452 aa20.09■□□□□ 0.81
SMARCD3-202ENST00000356800 PSMA7O14818 248 aa20.09■□□□□ 0.81
SMARCD3-202ENST00000356800 LGALS2P05162 132 aa20.09■□□□□ 0.81
SMARCD3-202ENST00000356800 HOXD8P13378 290 aaPredicted RBP20.09■□□□□ 0.81
SMARCD3-202ENST00000356800 MARK3P27448 753 aa20.09■□□□□ 0.81
SMARCD3-202ENST00000356800 STIM1Q13586 685 aa20.09■□□□□ 0.81
SMARCD3-202ENST00000356800 TARBP2Q15633 366 aaKnown RBP20.09■□□□□ 0.81
SMARCD3-202ENST00000356800 MYCT1Q8N699 235 aa20.09■□□□□ 0.81
SMARCD3-202ENST00000356800 TRIM5Q9C035 493 aa20.09■□□□□ 0.81
SMARCD3-202ENST00000356800 SMARCAD1Q9H4L7 1026 aa20.09■□□□□ 0.81
SMARCD3-202ENST00000356800 GPRC5CQ9NQ84 441 aa20.09■□□□□ 0.81
SMARCD3-202ENST00000356800 XPNPEP1Q9NQW7 623 aa20.09■□□□□ 0.81
SMARCD3-202ENST00000356800 OLFML3Q9NRN5 406 aa20.09■□□□□ 0.81
SMARCD3-202ENST00000356800 SRRDQ9UH36 339 aa20.09■□□□□ 0.81
SMARCD3-202ENST00000356800 CYBAP13498 195 aa20.08■□□□□ 0.81
SMARCD3-202ENST00000356800 TRIM32Q13049 653 aa20.08■□□□□ 0.81
SMARCD3-202ENST00000356800 PLCB4Q15147 1175 aa20.08■□□□□ 0.81
SMARCD3-202ENST00000356800 SPATA1Q5VX52 437 aa20.08■□□□□ 0.81
SMARCD3-202ENST00000356800 EPM2AIP1Q7L775 607 aaPredicted RBP20.08■□□□□ 0.81
SMARCD3-202ENST00000356800 ATP8B4Q8TF62 1192 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms