RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 XPNPEP3Q9NQH7 507 aa30.13■■■□□ 2.41
SSBP4-202ENST00000348495 NRBP2Q9NSY0 501 aa30.13■■■□□ 2.41
SSBP4-202ENST00000348495 KCND2Q9NZV8 630 aa30.13■■■□□ 2.41
SSBP4-202ENST00000348495 SEPT9Q9UHD8 586 aaPredicted RBP30.13■■■□□ 2.41
SSBP4-202ENST00000348495 ARID2Q68CP9 1835 aa30.13■■■□□ 2.41
SSBP4-202ENST00000348495 XKR9Q5GH70 373 aa30.13■■■□□ 2.41
SSBP4-202ENST00000348495 H3BRB1 525 aa30.12■■■□□ 2.41
SSBP4-202ENST00000348495 MSCO60682 206 aa30.12■■■□□ 2.41
SSBP4-202ENST00000348495 SMC2O95347 1197 aa30.12■■■□□ 2.41
SSBP4-202ENST00000348495 PGK1P00558 417 aa30.12■■■□□ 2.41
SSBP4-202ENST00000348495 F2P00734 622 aa30.12■■■□□ 2.41
SSBP4-202ENST00000348495 C6orf222P0C671 652 aaPredicted RBP30.12■■■□□ 2.41
SSBP4-202ENST00000348495 MARK3P27448 753 aa30.12■■■□□ 2.41
SSBP4-202ENST00000348495 TARBP2Q15633 366 aaKnown RBP30.12■■■□□ 2.41
SSBP4-202ENST00000348495 PADI6Q6TGC4 694 aa30.12■■■□□ 2.41
SSBP4-202ENST00000348495 SMARCE1Q969G3 411 aa30.12■■■□□ 2.41
SSBP4-202ENST00000348495 CEP89Q96ST8 783 aa30.12■■■□□ 2.41
SSBP4-202ENST00000348495 SH2D3AQ9BRG2 576 aa30.12■■■□□ 2.41
SSBP4-202ENST00000348495 RNPEPQ9H4A4 650 aa30.12■■■□□ 2.41
SSBP4-202ENST00000348495 TUT1Q9H6E5 874 aaKnown RBP30.12■■■□□ 2.41
SSBP4-202ENST00000348495 CYP26B1Q9NR63 512 aa30.12■■■□□ 2.41
SSBP4-202ENST00000348495 CENPFP49454 3210 aa30.12■■■□□ 2.41
SSBP4-202ENST00000348495 KLRC4O43908 158 aa30.11■■■□□ 2.41
SSBP4-202ENST00000348495 SLC9C1Q4G0N8 1177 aa30.11■■■□□ 2.41
SSBP4-202ENST00000348495 LHX8Q68G74 356 aa30.11■■■□□ 2.41
SSBP4-202ENST00000348495 KLHDC9Q8NEP7 349 aa30.11■■■□□ 2.41
SSBP4-202ENST00000348495 KAT2BQ92831 832 aa30.11■■■□□ 2.41
SSBP4-202ENST00000348495 CEP170P1Q96L14 293 aa30.11■■■□□ 2.41
SSBP4-202ENST00000348495 GSDMAQ96QA5 445 aa30.11■■■□□ 2.41
SSBP4-202ENST00000348495 ANP32EQ9BTT0 268 aa30.11■■■□□ 2.41
SSBP4-202ENST00000348495 SPC25Q9HBM1 224 aa30.11■■■□□ 2.41
SSBP4-202ENST00000348495 ZNF215Q9UL58 517 aaPredicted RBP30.11■■■□□ 2.41
SSBP4-202ENST00000348495 CST5P28325 142 aaPredicted RBP30.1■■■□□ 2.41
SSBP4-202ENST00000348495 DYMQ7RTS9 669 aa30.1■■■□□ 2.41
SSBP4-202ENST00000348495 FUCA2Q9BTY2 467 aa30.1■■■□□ 2.41
SSBP4-202ENST00000348495 BMP2KQ9NSY1 1161 aaPredicted RBP30.1■■■□□ 2.41
SSBP4-202ENST00000348495 NPHP3-ACAD11A0A0J9YXS1 232 aa30.1■■■□□ 2.41
SSBP4-202ENST00000348495 RPN1P04843 607 aaKnown RBP30.1■■■□□ 2.41
SSBP4-202ENST00000348495 GUCY2CP25092 1073 aa30.1■■■□□ 2.41
SSBP4-202ENST00000348495 ZNF445P59923 1031 aa30.1■■■□□ 2.41
SSBP4-202ENST00000348495 ASIC1P78348 528 aa30.1■■■□□ 2.41
SSBP4-202ENST00000348495 GIT2Q14161 759 aa30.1■■■□□ 2.41
SSBP4-202ENST00000348495 ZBTB42B2RXF5 422 aa30.09■■■□□ 2.41
SSBP4-202ENST00000348495 KPNA6O60684 536 aa30.09■■■□□ 2.41
SSBP4-202ENST00000348495 PURAQ00577 322 aaKnown RBP30.09■■■□□ 2.41
SSBP4-202ENST00000348495 GNASQ5JWF2 1037 aa30.09■■■□□ 2.41
SSBP4-202ENST00000348495 FBXO46Q6PJ61 603 aaPredicted RBP30.09■■■□□ 2.41
SSBP4-202ENST00000348495 CCDC43Q96MW1 224 aaKnown RBP30.09■■■□□ 2.41
SSBP4-202ENST00000348495 REEP2Q9BRK0 252 aa30.09■■■□□ 2.41
SSBP4-202ENST00000348495 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.09■■■□□ 2.413e-6■■■□□ 16.6
SSBP4-202ENST00000348495 PDLIM7Q9NR12 457 aa30.09■■■□□ 2.41
SSBP4-202ENST00000348495 MAN1B1Q9UKM7 699 aa30.09■■■□□ 2.41
SSBP4-202ENST00000348495 PVALEFA0A1B0GWK0 134 aa30.08■■■□□ 2.41
SSBP4-202ENST00000348495 FRMD3A2A2Y4 597 aa30.08■■■□□ 2.41
SSBP4-202ENST00000348495 HBP1O60381 514 aa30.08■■■□□ 2.41
SSBP4-202ENST00000348495 PKN2Q16513 984 aaKnown RBP30.08■■■□□ 2.41
SSBP4-202ENST00000348495 CCSAPQ6IQ19 270 aaPredicted RBP30.08■■■□□ 2.41
SSBP4-202ENST00000348495 PPME1Q9Y570 386 aa30.08■■■□□ 2.41
SSBP4-202ENST00000348495 KCNB1Q14721 858 aa30.08■■■□□ 2.41
SSBP4-202ENST00000348495 MTERF2Q49AM1 385 aa30.08■■■□□ 2.41
SSBP4-202ENST00000348495 UNC13DQ70J99 1090 aa30.08■■■□□ 2.41
SSBP4-202ENST00000348495 UNC93B1Q9H1C4 597 aa30.08■■■□□ 2.41
SSBP4-202ENST00000348495 FRMPD3Q5JV73 1810 aa30.07■■■□□ 2.4
SSBP4-202ENST00000348495 HAS3O00219 553 aa30.07■■■□□ 2.4
SSBP4-202ENST00000348495 MYL3P08590 195 aa30.07■■■□□ 2.4
SSBP4-202ENST00000348495 RAD51AP2Q09MP3 1159 aa30.07■■■□□ 2.4
SSBP4-202ENST00000348495 PAK6Q9NQU5 681 aaPredicted RBP30.07■■■□□ 2.4
SSBP4-202ENST00000348495 TRPC6Q9Y210 931 aa30.07■■■□□ 2.4
SSBP4-202ENST00000348495 USO1O60763 962 aaKnown RBP30.06■■■□□ 2.4
SSBP4-202ENST00000348495 DGAT1O75907 488 aa30.06■■■□□ 2.4
SSBP4-202ENST00000348495 KRT18P05783 430 aaKnown RBP30.06■■■□□ 2.4
SSBP4-202ENST00000348495 EHHADHQ08426 723 aa30.06■■■□□ 2.4
SSBP4-202ENST00000348495 KMT5BQ4FZB7 885 aa30.06■■■□□ 2.4
SSBP4-202ENST00000348495 DHX33Q9H6R0 707 aaKnown RBP30.06■■■□□ 2.4
SSBP4-202ENST00000348495 BIN1O00499 593 aa30.05■■■□□ 2.4
SSBP4-202ENST00000348495 BMP6P22004 513 aa30.05■■■□□ 2.4
SSBP4-202ENST00000348495 CACNB1Q02641 598 aaPredicted RBP30.05■■■□□ 2.4
SSBP4-202ENST00000348495 MORC3Q14149 939 aa30.05■■■□□ 2.4
SSBP4-202ENST00000348495 SASS6Q6UVJ0 657 aa30.05■■■□□ 2.4
SSBP4-202ENST00000348495 TRIML1Q8N9V2 468 aa30.05■■■□□ 2.4
SSBP4-202ENST00000348495 TIPINQ9BVW5 301 aa30.05■■■□□ 2.4
SSBP4-202ENST00000348495 RMND1Q9NWS8 449 aa30.05■■■□□ 2.4
SSBP4-202ENST00000348495 ODF2LQ9ULJ1 636 aa30.05■■■□□ 2.4
SSBP4-202ENST00000348495 ZEB2O60315 1214 aa30.05■■■□□ 2.4
SSBP4-202ENST00000348495 RHOBTB3O94955 611 aa30.05■■■□□ 2.4
SSBP4-202ENST00000348495 MAPK7Q13164 816 aa30.05■■■□□ 2.4
SSBP4-202ENST00000348495 MTFR1Q15390 333 aa30.05■■■□□ 2.4
SSBP4-202ENST00000348495 XPNPEP1Q9NQW7 623 aa30.05■■■□□ 2.4
SSBP4-202ENST00000348495 INSRRP14616 1297 aa30.04■■■□□ 2.4
SSBP4-202ENST00000348495 IDEP14735 1019 aa30.04■■■□□ 2.4
SSBP4-202ENST00000348495 RFC5P40937 340 aa30.04■■■□□ 2.4
SSBP4-202ENST00000348495 ZNF131P52739 623 aa30.04■■■□□ 2.4
SSBP4-202ENST00000348495 TYRO3Q06418 890 aa30.04■■■□□ 2.4
SSBP4-202ENST00000348495 ZNF484Q5JVG2 852 aa30.04■■■□□ 2.4
SSBP4-202ENST00000348495 LRSAM1Q6UWE0 723 aa30.04■■■□□ 2.4
SSBP4-202ENST00000348495 DAW1Q8N136 415 aa30.04■■■□□ 2.4
SSBP4-202ENST00000348495 PANK4Q9NVE7 773 aa30.04■■■□□ 2.4
SSBP4-202ENST00000348495 COL1A2P08123 1366 aa30.03■■■□□ 2.4
SSBP4-202ENST00000348495 RSPH10B2B2RC85 870 aa30.03■■■□□ 2.4
SSBP4-202ENST00000348495 RSPH10BP0C881 870 aa30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms