RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 GJB7Q6PEY0 223 aa19.37■□□□□ 0.69
VHL-202ENST00000345392 GPBP1Q86WP2 473 aa19.37■□□□□ 0.69
VHL-202ENST00000345392 WDR66Q8TBY9 1149 aa19.37■□□□□ 0.69
VHL-202ENST00000345392 XPO6Q96QU8 1125 aaKnown RBP19.37■□□□□ 0.69
VHL-202ENST00000345392 GOPCQ9HD26 462 aa19.37■□□□□ 0.69
VHL-202ENST00000345392 DDX25Q9UHL0 483 aaKnown RBP19.37■□□□□ 0.69
VHL-202ENST00000345392 ROBO3Q96MS0 1386 aa19.37■□□□□ 0.69
VHL-202ENST00000345392 TLDC2A0PJX2 215 aa19.37■□□□□ 0.69
VHL-202ENST00000345392 CETN3O15182 167 aa19.37■□□□□ 0.69
VHL-202ENST00000345392 SLURP2P0DP57 97 aa19.37■□□□□ 0.69
VHL-202ENST00000345392 CHRM1P11229 460 aaPredicted RBP19.37■□□□□ 0.69
VHL-202ENST00000345392 PRPF4BQ13523 1007 aaKnown RBP19.37■□□□□ 0.69
VHL-202ENST00000345392 C10orf76Q5T2E6 689 aa19.37■□□□□ 0.69
VHL-202ENST00000345392 HIBCHQ6NVY1 386 aaPredicted RBP19.37■□□□□ 0.69
VHL-202ENST00000345392 FOXR2Q6PJQ5 311 aa19.37■□□□□ 0.69
VHL-202ENST00000345392 CCDC65Q8IXS2 484 aa19.37■□□□□ 0.69
VHL-202ENST00000345392 POTEB3A0JP26 581 aa19.36■□□□□ 0.69
VHL-202ENST00000345392 POTECB2RU33 542 aa19.36■□□□□ 0.69
VHL-202ENST00000345392 PLA2G4BP0C869 781 aa19.36■□□□□ 0.69
VHL-202ENST00000345392 EZRP15311 586 aaKnown RBP19.36■□□□□ 0.69
VHL-202ENST00000345392 PPP1R7Q15435 360 aa19.36■□□□□ 0.69
VHL-202ENST00000345392 DCAF17Q5H9S7 520 aaPredicted RBP19.36■□□□□ 0.69
VHL-202ENST00000345392 ERMARDQ5T6L9 678 aa19.36■□□□□ 0.69
VHL-202ENST00000345392 POTEBQ6S5H4 581 aa19.36■□□□□ 0.69
VHL-202ENST00000345392 TACO1Q9BSH4 297 aaKnown RBP19.36■□□□□ 0.69
VHL-202ENST00000345392 OSGEPQ9NPF4 335 aa19.36■□□□□ 0.69
VHL-202ENST00000345392 BAIAP2L1Q9UHR4 511 aa19.36■□□□□ 0.69
VHL-202ENST00000345392 PCDHA12Q9UN75 941 aa19.36■□□□□ 0.69
VHL-202ENST00000345392 TRIM37O94972 964 aa19.36■□□□□ 0.69
VHL-202ENST00000345392 PON1P27169 355 aa19.36■□□□□ 0.69
VHL-202ENST00000345392 EXOC3L4Q17RC7 722 aa19.36■□□□□ 0.69
VHL-202ENST00000345392 MSL1Q68DK7 614 aa19.36■□□□□ 0.69
VHL-202ENST00000345392 NT5DC3Q86UY8 548 aa19.36■□□□□ 0.69
VHL-202ENST00000345392 MIEF2Q96C03 454 aa19.36■□□□□ 0.69
VHL-202ENST00000345392 FMO2Q99518 471 aa19.36■□□□□ 0.69
VHL-202ENST00000345392 SELENOSQ9BQE4 189 aa19.36■□□□□ 0.69
VHL-202ENST00000345392 TNRC6CQ9HCJ0 1690 aaKnown RBP19.35■□□□□ 0.69
VHL-202ENST00000345392 ESYT2A0FGR8 921 aa19.35■□□□□ 0.69
VHL-202ENST00000345392 PPP1R12BO60237 982 aaPredicted RBP19.35■□□□□ 0.69
VHL-202ENST00000345392 FLOT1O75955 427 aa19.35■□□□□ 0.69
VHL-202ENST00000345392 KRT18P05783 430 aaKnown RBP19.35■□□□□ 0.69
VHL-202ENST00000345392 CHN1P15882 459 aa19.35■□□□□ 0.69
VHL-202ENST00000345392 PICALMQ13492 652 aa19.35■□□□□ 0.69
VHL-202ENST00000345392 TCERG1LQ5VWI1 586 aa19.35■□□□□ 0.69
VHL-202ENST00000345392 ARMC9Q7Z3E5 817 aa19.35■□□□□ 0.69
VHL-202ENST00000345392 CCDC50Q8IVM0 306 aa19.35■□□□□ 0.69
VHL-202ENST00000345392 RASGEF1CQ8N431 466 aa19.35■□□□□ 0.69
VHL-202ENST00000345392 U2AF1L4Q8WU68 220 aaKnown RBP19.35■□□□□ 0.69
VHL-202ENST00000345392 KDM4CQ9H3R0 1056 aa19.35■□□□□ 0.69
VHL-202ENST00000345392 SLITRK6Q9H5Y7 841 aa19.35■□□□□ 0.69
VHL-202ENST00000345392 STXBP5LQ9Y2K9 1186 aa19.35■□□□□ 0.69
VHL-202ENST00000345392 H2AFZP0C0S5 128 aa19.35■□□□□ 0.69
VHL-202ENST00000345392 ELF3P78545 371 aaPredicted RBP19.35■□□□□ 0.69
VHL-202ENST00000345392 H2AFVQ71UI9 128 aa19.35■□□□□ 0.69
VHL-202ENST00000345392 NEDD1Q8NHV4 660 aa19.35■□□□□ 0.69
VHL-202ENST00000345392 ATP8B4Q8TF62 1192 aa19.35■□□□□ 0.69
VHL-202ENST00000345392 TLCD1Q96CP7 247 aa19.35■□□□□ 0.69
VHL-202ENST00000345392 RIOX1Q9H6W3 641 aa19.35■□□□□ 0.69
VHL-202ENST00000345392 GPCPD1Q9NPB8 672 aa19.35■□□□□ 0.69
VHL-202ENST00000345392 PPIP5K2O43314 1243 aa19.34■□□□□ 0.69
VHL-202ENST00000345392 KIF1CO43896 1103 aaKnown RBP19.34■□□□□ 0.69
VHL-202ENST00000345392 MGRN1O60291 552 aa19.34■□□□□ 0.69
VHL-202ENST00000345392 RPS6KA4O75676 772 aa19.34■□□□□ 0.69
VHL-202ENST00000345392 GPSM2P81274 684 aa19.34■□□□□ 0.69
VHL-202ENST00000345392 GLG1Q92896 1179 aa19.34■□□□□ 0.69
VHL-202ENST00000345392 MTFR1LQ9H019 292 aa19.34■□□□□ 0.69
VHL-202ENST00000345392 FAM114A2Q9NRY5 505 aa19.34■□□□□ 0.69
VHL-202ENST00000345392 SUCLA2Q9P2R7 463 aaPredicted RBP19.34■□□□□ 0.69
VHL-202ENST00000345392 ARMCX3Q9UH62 379 aaPredicted RBP19.34■□□□□ 0.69
VHL-202ENST00000345392 SWAP70Q9UH65 585 aa19.34■□□□□ 0.69
VHL-202ENST00000345392 CNTNAP4Q9C0A0 1308 aa19.34■□□□□ 0.69
VHL-202ENST00000345392 MAST2Q6P0Q8 1798 aa19.34■□□□□ 0.69
VHL-202ENST00000345392 CCT8L1PA6NM43 557 aa19.34■□□□□ 0.69
VHL-202ENST00000345392 DDX3XO00571 662 aaKnown RBP eCLIP19.34■□□□□ 0.691e-25■■■■■ 39.5
VHL-202ENST00000345392 MMEP08473 750 aa19.34■□□□□ 0.69
VHL-202ENST00000345392 SEPT2Q15019 361 aa19.34■□□□□ 0.69
VHL-202ENST00000345392 ACCSLQ4AC99 568 aa19.34■□□□□ 0.69
VHL-202ENST00000345392 SLFN11Q7Z7L1 901 aa19.34■□□□□ 0.69
VHL-202ENST00000345392 CCDC197Q8NCU1 140 aa19.34■□□□□ 0.69
VHL-202ENST00000345392 BANK1Q8NDB2 785 aa19.34■□□□□ 0.69
VHL-202ENST00000345392 UHMK1Q8TAS1 419 aaKnown RBP19.34■□□□□ 0.69
VHL-202ENST00000345392 SEC14L1Q92503 715 aa19.34■□□□□ 0.69
VHL-202ENST00000345392 FAM129AQ9BZQ8 928 aa19.34■□□□□ 0.69
VHL-202ENST00000345392 BZW2Q9Y6E2 419 aaKnown RBP19.34■□□□□ 0.69
VHL-202ENST00000345392 SPDYE3A6NKU9 549 aa19.33■□□□□ 0.69
VHL-202ENST00000345392 ONECUT3O60422 494 aaPredicted RBP19.33■□□□□ 0.69
VHL-202ENST00000345392 UFL1O94874 794 aa19.33■□□□□ 0.69
VHL-202ENST00000345392 CYP11B2P19099 503 aa19.33■□□□□ 0.69
VHL-202ENST00000345392 POU5F1Q01860 360 aaKnown RBP19.33■□□□□ 0.69
VHL-202ENST00000345392 KRT27Q7Z3Y8 459 aa19.33■□□□□ 0.69
VHL-202ENST00000345392 TCP11Q8WWU5 503 aa19.33■□□□□ 0.69
VHL-202ENST00000345392 CCNL1Q9UK58 526 aaPredicted RBP19.33■□□□□ 0.69
VHL-202ENST00000345392 RTCBQ9Y3I0 505 aaKnown RBP19.33■□□□□ 0.69
VHL-202ENST00000345392 NAV1Q8NEY1 1877 aa19.33■□□□□ 0.68
VHL-202ENST00000345392 DNAJC8O75937 253 aaPredicted RBP19.33■□□□□ 0.68
VHL-202ENST00000345392 ATP6V1G2O95670 118 aa19.33■□□□□ 0.68
VHL-202ENST00000345392 AFPP02771 609 aaKnown RBP19.33■□□□□ 0.68
VHL-202ENST00000345392 STAT3P40763 770 aa19.33■□□□□ 0.68
VHL-202ENST00000345392 UBAP2Q5T6F2 1119 aaKnown RBP19.33■□□□□ 0.68
VHL-202ENST00000345392 LMBR1Q8WVP7 490 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms