RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 CALM2P0DP24 149 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 CALM3P0DP25 149 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 MYBL1P10243 752 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 ATP5DP30049 168 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 VHLP40337 213 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 CD151P48509 253 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 IFNAR2P48551 515 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 MAEAQ7L5Y9 396 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 SYCE1Q8N0S2 351 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 NCSTNQ92542 709 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 NDNQ99608 321 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 NACAP1Q9BZK3 213 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 ROPN1BQ9BZX4 212 aaPredicted RBP20.07■□□□□ 0.8
SMPD1-201ENST00000342245 EPB41L4BQ9H329 900 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 ROPN1Q9HAT0 212 aaPredicted RBP20.07■□□□□ 0.8
SMPD1-201ENST00000342245 FGFR1OP2Q9NVK5 253 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 PNMA3Q9UL41 463 aa20.07■□□□□ 0.8
SMPD1-201ENST00000342245 TLDC2A0PJX2 215 aa20.06■□□□□ 0.8
SMPD1-201ENST00000342245 TCP11X1B4DZS4 312 aa20.06■□□□□ 0.8
SMPD1-201ENST00000342245 EYA4O95677 639 aa20.06■□□□□ 0.8
SMPD1-201ENST00000342245 FUT2Q10981 343 aa20.06■□□□□ 0.8
SMPD1-201ENST00000342245 NPY5RQ15761 445 aa20.06■□□□□ 0.8
SMPD1-201ENST00000342245 SH2D4BQ5SQS7 431 aa20.06■□□□□ 0.8
SMPD1-201ENST00000342245 C4orf32Q8N8J7 132 aa20.06■□□□□ 0.8
SMPD1-201ENST00000342245 MTFR1LQ9H019 292 aa20.06■□□□□ 0.8
SMPD1-201ENST00000342245 GOPCQ9HD26 462 aa20.06■□□□□ 0.8
SMPD1-201ENST00000342245 CYP27B1O15528 508 aa20.05■□□□□ 0.8
SMPD1-201ENST00000342245 PDE6AP16499 860 aa20.05■□□□□ 0.8
SMPD1-201ENST00000342245 SETDB1Q15047 1291 aa20.05■□□□□ 0.8
SMPD1-201ENST00000342245 ATP8B4Q8TF62 1192 aa20.05■□□□□ 0.8
SMPD1-201ENST00000342245 AZIN2Q96A70 460 aa20.05■□□□□ 0.8
SMPD1-201ENST00000342245 ZNF333Q96JL9 665 aa20.05■□□□□ 0.8
SMPD1-201ENST00000342245 PUS3Q9BZE2 481 aaKnown RBP20.05■□□□□ 0.8
SMPD1-201ENST00000342245 SUCLA2Q9P2R7 463 aaPredicted RBP20.05■□□□□ 0.8
SMPD1-201ENST00000342245 PARP2Q9UGN5 583 aa20.05■□□□□ 0.8
SMPD1-201ENST00000342245 ZMYND8Q9ULU4 1186 aaPredicted RBP20.05■□□□□ 0.8
SMPD1-201ENST00000342245 THRAP3Q9Y2W1 955 aaKnown RBP20.05■□□□□ 0.8
SMPD1-201ENST00000342245 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.05■□□□□ 0.8
SMPD1-201ENST00000342245 SLC4A4Q9Y6R1 1079 aa20.05■□□□□ 0.8
SMPD1-201ENST00000342245 GNAT2P19087 354 aa20.05■□□□□ 0.8
SMPD1-201ENST00000342245 IFI35P80217 286 aaPredicted RBP20.05■□□□□ 0.8
SMPD1-201ENST00000342245 PIK3AP1Q6ZUJ8 805 aa20.05■□□□□ 0.8
SMPD1-201ENST00000342245 METTL13Q8N6R0 699 aa20.05■□□□□ 0.8
SMPD1-201ENST00000342245 DPH5Q9H2P9 285 aa20.05■□□□□ 0.8
SMPD1-201ENST00000342245 ZDHHC18Q9NUE0 388 aa20.05■□□□□ 0.8
SMPD1-201ENST00000342245 GGT7Q9UJ14 662 aa20.05■□□□□ 0.8
SMPD1-201ENST00000342245 V9GY48 417 aaPredicted RBP20.05■□□□□ 0.8
SMPD1-201ENST00000342245 MCAMP43121 646 aa20.04■□□□□ 0.8
SMPD1-201ENST00000342245 POU5F1Q01860 360 aaKnown RBP20.04■□□□□ 0.8
SMPD1-201ENST00000342245 OCRLQ01968 901 aa20.04■□□□□ 0.8
SMPD1-201ENST00000342245 LRRC63Q05C16 580 aa20.04■□□□□ 0.8
SMPD1-201ENST00000342245 ENOX2Q16206 610 aaKnown RBP20.04■□□□□ 0.8
SMPD1-201ENST00000342245 GSTA3Q16772 222 aa20.04■□□□□ 0.8
SMPD1-201ENST00000342245 LRRC57Q8N9N7 239 aa20.04■□□□□ 0.8
SMPD1-201ENST00000342245 UTP4Q969X6 686 aaKnown RBP20.04■□□□□ 0.8
SMPD1-201ENST00000342245 AKAP11Q9UKA4 1901 aa20.04■□□□□ 0.8
SMPD1-201ENST00000342245 TJP1Q07157 1748 aa20.04■□□□□ 0.8
SMPD1-201ENST00000342245 POTEFA5A3E0 1075 aa20.04■□□□□ 0.8
SMPD1-201ENST00000342245 LAD1O00515 517 aa20.04■□□□□ 0.8
SMPD1-201ENST00000342245 POTEIP0CG38 1075 aa20.04■□□□□ 0.8
SMPD1-201ENST00000342245 POTEJP0CG39 1038 aa20.04■□□□□ 0.8
SMPD1-201ENST00000342245 ZBTB48P10074 688 aaPredicted RBP20.04■□□□□ 0.8
SMPD1-201ENST00000342245 SF3A3Q12874 501 aaKnown RBP eCLIP20.04■□□□□ 0.8
SMPD1-201ENST00000342245 KPNB1Q14974 876 aaKnown RBP20.04■□□□□ 0.8
SMPD1-201ENST00000342245 DUPD1Q68J44 220 aa20.04■□□□□ 0.8
SMPD1-201ENST00000342245 POTEEQ6S8J3 1075 aa20.04■□□□□ 0.8
SMPD1-201ENST00000342245 INTS8Q75QN2 995 aaKnown RBP20.04■□□□□ 0.8
SMPD1-201ENST00000342245 TRIM42Q8IWZ5 723 aa20.04■□□□□ 0.8
SMPD1-201ENST00000342245 ERP44Q9BS26 406 aa20.04■□□□□ 0.8
SMPD1-201ENST00000342245 LRRC4CQ9HCJ2 640 aa20.04■□□□□ 0.8
SMPD1-201ENST00000342245 CIDEBQ9UHD4 219 aa20.04■□□□□ 0.8
SMPD1-201ENST00000342245 RASAL2Q9UJF2 1139 aa20.04■□□□□ 0.8
SMPD1-201ENST00000342245 TCRBV5S4A2TA0A5A2 114 aa20.03■□□□□ 0.8
SMPD1-201ENST00000342245 ECE2O60344 883 aa20.03■□□□□ 0.8
SMPD1-201ENST00000342245 IDH1O75874 414 aaKnown RBP20.03■□□□□ 0.8
SMPD1-201ENST00000342245 GSTT1P30711 240 aa20.03■□□□□ 0.8
SMPD1-201ENST00000342245 STK4Q13043 487 aa20.03■□□□□ 0.8
SMPD1-201ENST00000342245 DHX34Q14147 1143 aaKnown RBP20.03■□□□□ 0.8
SMPD1-201ENST00000342245 SPDYAQ5MJ70 313 aa20.03■□□□□ 0.8
SMPD1-201ENST00000342245 CKAP2Q8WWK9 683 aa20.03■□□□□ 0.8
SMPD1-201ENST00000342245 ZKSCAN3Q9BRR0 538 aa20.03■□□□□ 0.8
SMPD1-201ENST00000342245 TRIM9Q9C026 710 aa20.03■□□□□ 0.8
SMPD1-201ENST00000342245 SLC52A2Q9HAB3 445 aa20.03■□□□□ 0.8
SMPD1-201ENST00000342245 EPB41L4AQ9HCS5 686 aaPredicted RBP20.03■□□□□ 0.8
SMPD1-201ENST00000342245 USP40Q9NVE5 1235 aa20.03■□□□□ 0.8
SMPD1-201ENST00000342245 TRIM33Q9UPN9 1127 aa20.03■□□□□ 0.8
SMPD1-201ENST00000342245 USP20Q9Y2K6 914 aa20.03■□□□□ 0.8
SMPD1-201ENST00000342245 RASGRF2O14827 1237 aa20.03■□□□□ 0.8
SMPD1-201ENST00000342245 PRDM1O75626 825 aa20.03■□□□□ 0.8
SMPD1-201ENST00000342245 DESP17661 470 aa20.03■□□□□ 0.8
SMPD1-201ENST00000342245 ANXA13P27216 316 aa20.03■□□□□ 0.8
SMPD1-201ENST00000342245 CALML3P27482 149 aa20.03■□□□□ 0.8
SMPD1-201ENST00000342245 FAM83BQ5T0W9 1011 aa20.03■□□□□ 0.8
SMPD1-201ENST00000342245 FOXB2Q5VYV0 432 aa20.03■□□□□ 0.8
SMPD1-201ENST00000342245 SYCP3Q8IZU3 236 aa20.03■□□□□ 0.8
SMPD1-201ENST00000342245 RNF25Q96BH1 459 aaPredicted RBP20.03■□□□□ 0.8
SMPD1-201ENST00000342245 RUNDC3BQ96NL0 473 aa20.03■□□□□ 0.8
SMPD1-201ENST00000342245 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.03■□□□□ 0.8
SMPD1-201ENST00000342245 MTRF1LQ9UGC7 380 aaKnown RBP20.03■□□□□ 0.8
SMPD1-201ENST00000342245 AFPP02771 609 aaKnown RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms