RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 IGF2BP3O00425 579 aaKnown RBP eCLIP16.73■□□□□ 0.27
LIMK2-203ENST00000340552 ASAP2O43150 1006 aa16.73■□□□□ 0.27
LIMK2-203ENST00000340552 UBOX5O94941 541 aa16.73■□□□□ 0.27
LIMK2-203ENST00000340552 KRT71Q3SY84 523 aa16.73■□□□□ 0.27
LIMK2-203ENST00000340552 MTHFD1LQ6UB35 978 aa16.73■□□□□ 0.27
LIMK2-203ENST00000340552 TMTC3Q6ZXV5 915 aa16.73■□□□□ 0.27
LIMK2-203ENST00000340552 DGKHQ86XP1 1220 aa16.73■□□□□ 0.27
LIMK2-203ENST00000340552 DBNDD1Q9H9R9 158 aa16.73■□□□□ 0.27
LIMK2-203ENST00000340552 RGL1Q9NZL6 768 aa16.73■□□□□ 0.27
LIMK2-203ENST00000340552 TSKSQ9UJT2 592 aa16.73■□□□□ 0.27
LIMK2-203ENST00000340552 EPHB6O15197 1021 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 PRPF3O43395 683 aaKnown RBP16.72■□□□□ 0.27
LIMK2-203ENST00000340552 FTCDO95954 541 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 KRT16P08779 473 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 ATP2A2P16615 1042 aaKnown RBP16.72■□□□□ 0.27
LIMK2-203ENST00000340552 HNRNPH3P31942 346 aaKnown RBP16.72■□□□□ 0.27
LIMK2-203ENST00000340552 TTI2Q6NXR4 508 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 LRRC34Q8IZ02 419 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 PROCA1Q8NCQ7 364 aaPredicted RBP16.72■□□□□ 0.27
LIMK2-203ENST00000340552 PLCD4Q9BRC7 762 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 MTFR1LQ9H019 292 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 ZNF287Q9HBT7 754 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 GGT7Q9UJ14 662 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 PACSIN2Q9UNF0 486 aaPredicted RBP16.72■□□□□ 0.27
LIMK2-203ENST00000340552 V9GY48 417 aaPredicted RBP16.72■□□□□ 0.27
LIMK2-203ENST00000340552 DDX60LQ5H9U9 1706 aaKnown RBP16.72■□□□□ 0.27
LIMK2-203ENST00000340552 hCG_1642624A0A1W2PR95 340 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 USP17L3A6NCW0 530 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 USP17L4A6NCW7 530 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 RASA1P20936 1047 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 CCNG1P51959 295 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 PKN1Q16512 942 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 MIIPQ5JXC2 388 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 PPP1R15BQ5SWA1 713 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 USP17L1Q7RTZ2 530 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 PODNQ7Z5L7 613 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.72■□□□□ 0.27
LIMK2-203ENST00000340552 CENPTQ96BT3 561 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 DUSP9Q99956 384 aaKnown RBP16.72■□□□□ 0.27
LIMK2-203ENST00000340552 ELAC2Q9BQ52 826 aaKnown RBP16.72■□□□□ 0.27
LIMK2-203ENST00000340552 ADAM22Q9P0K1 906 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 PNMA2Q9UL42 364 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 MYH4Q9Y623 1939 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 GRID2IPA4D2P6 1211 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 RNF8O76064 485 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 SLC1A4P43007 532 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 CDK8P49336 464 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 IFI16Q16666 785 aaKnown RBP16.72■□□□□ 0.27
LIMK2-203ENST00000340552 QSER1Q2KHR3 1735 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 FIGNQ5HY92 759 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 TRIM68Q6AZZ1 485 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 ANO7Q6IWH7 933 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 C16orf86Q6ZW13 317 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 KIF2BQ8N4N8 673 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 TEKT4Q8WW24 435 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 ECT2Q9H8V3 914 aa16.72■□□□□ 0.27
LIMK2-203ENST00000340552 CNOT10Q9H9A5 744 aaKnown RBP16.72■□□□□ 0.27
LIMK2-203ENST00000340552 FOCADQ5VW36 1801 aa16.71■□□□□ 0.27
LIMK2-203ENST00000340552 SART1O43290 800 aaKnown RBP16.71■□□□□ 0.27
LIMK2-203ENST00000340552 MMEP08473 750 aa16.71■□□□□ 0.27
LIMK2-203ENST00000340552 CHN1P15882 459 aa16.71■□□□□ 0.27
LIMK2-203ENST00000340552 XBP1P17861 261 aa16.71■□□□□ 0.27
LIMK2-203ENST00000340552 SCNN1DP51172 638 aa16.71■□□□□ 0.27
LIMK2-203ENST00000340552 GFPT1Q06210 699 aaPredicted RBP16.71■□□□□ 0.27
LIMK2-203ENST00000340552 PTGDRQ13258 359 aa16.71■□□□□ 0.27
LIMK2-203ENST00000340552 CCDC178Q5BJE1 867 aa16.71■□□□□ 0.27
LIMK2-203ENST00000340552 TLCD1Q96CP7 247 aa16.71■□□□□ 0.27
LIMK2-203ENST00000340552 PALMO75781 387 aa16.71■□□□□ 0.26
LIMK2-203ENST00000340552 TNNC1P63316 161 aa16.71■□□□□ 0.26
LIMK2-203ENST00000340552 MXRA7P84157 204 aa16.71■□□□□ 0.26
LIMK2-203ENST00000340552 SRBD1Q8N5C6 995 aaKnown RBP16.71■□□□□ 0.26
LIMK2-203ENST00000340552 USP38Q8NB14 1042 aa16.71■□□□□ 0.26
LIMK2-203ENST00000340552 PNMA1Q8ND90 353 aa16.71■□□□□ 0.26
LIMK2-203ENST00000340552 ATXN2LQ8WWM7 1075 aaKnown RBP16.71■□□□□ 0.26
LIMK2-203ENST00000340552 ANKS1AQ92625 1134 aa16.71■□□□□ 0.26
LIMK2-203ENST00000340552 PDGFDQ9GZP0 370 aaPredicted RBP16.71■□□□□ 0.26
LIMK2-203ENST00000340552 KCNQ5Q9NR82 932 aa16.71■□□□□ 0.26
LIMK2-203ENST00000340552 TCP11L1Q9NUJ3 509 aa16.71■□□□□ 0.26
LIMK2-203ENST00000340552 CNTNAP5Q8WYK1 1306 aa16.7■□□□□ 0.26
LIMK2-203ENST00000340552 GOLGB1Q14789 3259 aaKnown RBP16.7■□□□□ 0.26
LIMK2-203ENST00000340552 PYGBP11216 843 aa16.7■□□□□ 0.26
LIMK2-203ENST00000340552 RANBP1P43487 201 aa16.7■□□□□ 0.26
LIMK2-203ENST00000340552 PICALMQ13492 652 aa16.7■□□□□ 0.26
LIMK2-203ENST00000340552 CUL1Q13616 776 aa16.7■□□□□ 0.26
LIMK2-203ENST00000340552 SPATA21Q7Z572 469 aa16.7■□□□□ 0.26
LIMK2-203ENST00000340552 CSGALNACT2Q8N6G5 542 aa16.7■□□□□ 0.26
LIMK2-203ENST00000340552 TEX9Q8N6V9 391 aa16.7■□□□□ 0.26
LIMK2-203ENST00000340552 EIF1ADQ8N9N8 165 aaKnown RBP16.7■□□□□ 0.26
LIMK2-203ENST00000340552 ZFAND2BQ8WV99 257 aa16.7■□□□□ 0.26
LIMK2-203ENST00000340552 CNOT6LQ96LI5 555 aaKnown RBP16.7■□□□□ 0.26
LIMK2-203ENST00000340552 ERGIC2Q96RQ1 377 aa16.7■□□□□ 0.26
LIMK2-203ENST00000340552 G3BP2Q9UN86 482 aaKnown RBP16.7■□□□□ 0.26
LIMK2-203ENST00000340552 STK38LQ9Y2H1 464 aa16.7■□□□□ 0.26
LIMK2-203ENST00000340552 C2CD2Q9Y426 696 aa16.7■□□□□ 0.26
LIMK2-203ENST00000340552 KIF5BP33176 963 aa16.7■□□□□ 0.26
LIMK2-203ENST00000340552 IL17AQ16552 155 aa16.7■□□□□ 0.26
LIMK2-203ENST00000340552 DEFB132Q7Z7B7 95 aa16.7■□□□□ 0.26
LIMK2-203ENST00000340552 TMEM59LQ9UK28 342 aa16.7■□□□□ 0.26
LIMK2-203ENST00000340552 LRRD1A4D1F6 860 aa16.69■□□□□ 0.26
LIMK2-203ENST00000340552 MTIF2P46199 727 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms