RNA–Protein interactions for RNA: ENST00000338252.7

CAST-203, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-203ENST00000338252 FGFR1OP2Q9NVK5 253 aa7.35□□□□□ -1.23
CAST-203ENST00000338252 MAGEC2Q9UBF1 373 aaPredicted RBP7.35□□□□□ -1.23
CAST-203ENST00000338252 TUBGCP4Q9UGJ1 667 aa7.35□□□□□ -1.23
CAST-203ENST00000338252 WDR37Q9Y2I8 494 aa7.35□□□□□ -1.23
CAST-203ENST00000338252 SIK3Q9Y2K2 1263 aa7.35□□□□□ -1.23
CAST-203ENST00000338252 USP20Q9Y2K6 914 aa7.35□□□□□ -1.23
CAST-203ENST00000338252 COMMD3-BMI1R4GMX3 469 aa7.35□□□□□ -1.23
CAST-203ENST00000338252 LAMB4A4D0S4 1761 aa7.35□□□□□ -1.23
CAST-203ENST00000338252 ZNF189O75820 626 aaPredicted RBP7.34□□□□□ -1.23
CAST-203ENST00000338252 AGTP01019 485 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 IFNAR2P48551 515 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 DNA2P51530 1060 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 EHHADHQ08426 723 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 CCDC152Q4G0S7 254 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 WASHC2DQ5SRD0 308 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 RNF43Q68DV7 783 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 ARMCX6Q7L4S7 300 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 PTF1AQ7RTS3 328 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 FAM114A1Q8IWE2 563 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 PROCA1Q8NCQ7 364 aaPredicted RBP7.34□□□□□ -1.23
CAST-203ENST00000338252 STKLD1Q8NE28 680 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 DYDC1Q8WWB3 177 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 TRIM47Q96LD4 638 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 DDX23Q9BUQ8 820 aaKnown RBP7.34□□□□□ -1.23
CAST-203ENST00000338252 PUS7LQ9H0K6 701 aaKnown RBP7.34□□□□□ -1.23
CAST-203ENST00000338252 GPR108Q9NPR9 543 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.34□□□□□ -1.237e-7■■■■■ 104.8
CAST-203ENST00000338252 CCDC87Q9NVE4 849 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 RGPD8O14715 1765 aaPredicted RBP7.34□□□□□ -1.23
CAST-203ENST00000338252 NFAT5O94916 1531 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 SSU72P8A0A1W2PR75 194 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 PLEKHG3A1L390 1219 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 LRRC53A6NM62 1247 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 ATP9AO75110 1047 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 VHLP40337 213 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 LIFRP42702 1097 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 BTG3Q14201 252 aaPredicted RBP7.34□□□□□ -1.23
CAST-203ENST00000338252 RCN2Q14257 317 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 PDIA6Q15084 440 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 COL13A1Q5TAT6 717 aaPredicted RBP7.34□□□□□ -1.23
CAST-203ENST00000338252 CGB2Q6NT52 195 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 ATG9AQ7Z3C6 839 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 COL23A1Q86Y22 540 aaPredicted RBP7.34□□□□□ -1.23
CAST-203ENST00000338252 AGGF1Q8N302 714 aaeCLIP7.34□□□□□ -1.23
CAST-203ENST00000338252 SMC1BQ8NDV3 1235 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 BAP1Q92560 729 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 AZI2Q9H6S1 392 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 ATP8A1Q9Y2Q0 1164 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 PNPLA7Q6ZV29 1317 aa7.34□□□□□ -1.23
CAST-203ENST00000338252 PRAMEF22A3QJZ6 481 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 CCDC169A6NNP5 214 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 BTBD11A6QL63 1104 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 KLRC4O43908 158 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 DDX58O95786 925 aaKnown RBP7.33□□□□□ -1.24
CAST-203ENST00000338252 PRELPP51888 382 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 PHEXP78562 749 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 PLOD1Q02809 727 aaPredicted RBP7.33□□□□□ -1.24
CAST-203ENST00000338252 ACVR2BQ13705 512 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 DAB2IPQ5VWQ8 1189 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 DZIP3Q86Y13 1208 aaKnown RBP7.33□□□□□ -1.24
CAST-203ENST00000338252 ZBTB8BQ8NAP8 495 aaPredicted RBP7.33□□□□□ -1.24
CAST-203ENST00000338252 NGDNQ8NEJ9 315 aaKnown RBP7.33□□□□□ -1.24
CAST-203ENST00000338252 TTC8Q8TAM2 541 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.33□□□□□ -1.24
CAST-203ENST00000338252 NRG4Q8WWG1 115 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 KCNN1Q92952 543 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 CNOT6LQ96LI5 555 aaKnown RBP7.33□□□□□ -1.24
CAST-203ENST00000338252 PCMTD1Q96MG8 357 aaPredicted RBP7.33□□□□□ -1.24
CAST-203ENST00000338252 GBP5Q96PP8 586 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 PYM1Q9BRP8 204 aaKnown RBP7.33□□□□□ -1.24
CAST-203ENST00000338252 CCDC28BQ9BUN5 200 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 PABPC3Q9H361 631 aaKnown RBP7.33□□□□□ -1.24
CAST-203ENST00000338252 TXLNGQ9NUQ3 528 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 RHBDL2Q9NX52 303 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 SEC63Q9UGP8 760 aaKnown RBP7.33□□□□□ -1.24
CAST-203ENST00000338252 RPL26L1Q9UNX3 145 aaKnown RBP7.33□□□□□ -1.24
CAST-203ENST00000338252 SHANK3Q9BYB0 1731 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 TCP11X1B4DZS4 312 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 HNRNPRO43390 633 aaKnown RBP7.33□□□□□ -1.24
CAST-203ENST00000338252 DEXIO95424 95 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 BMP15O95972 392 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 ASLP04424 464 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 VIL1P09327 827 aaKnown RBP7.33□□□□□ -1.24
CAST-203ENST00000338252 IFIT1P09914 478 aaKnown RBP7.33□□□□□ -1.24
CAST-203ENST00000338252 SKIP12755 728 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 KLRC1P26715 233 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 TIMM10P62072 90 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 ATP2C1P98194 919 aaPredicted RBP7.33□□□□□ -1.24
CAST-203ENST00000338252 POU5F1Q01860 360 aaKnown RBP7.33□□□□□ -1.24
CAST-203ENST00000338252 SULT2A1Q06520 285 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 CBX3Q13185 183 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 ZRSR2Q15696 482 aaKnown RBP7.33□□□□□ -1.24
CAST-203ENST00000338252 KCTD19Q17RG1 926 aaPredicted RBP7.33□□□□□ -1.24
CAST-203ENST00000338252 ECHDC2Q86YB7 292 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 TNS4Q8IZW8 715 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 CSGALNACT2Q8N6G5 542 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 GIMAP8Q8ND71 665 aaPredicted RBP7.33□□□□□ -1.24
CAST-203ENST00000338252 INPP5DQ92835 1189 aa7.33□□□□□ -1.24
CAST-203ENST00000338252 RNF25Q96BH1 459 aaPredicted RBP7.33□□□□□ -1.24
CAST-203ENST00000338252 PPP1R14BQ96C90 147 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms