RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 CNOT8Q9UFF9 292 aaKnown RBP14.8□□□□□ -0.04
RTN4-202ENST00000337526 TAF6LQ9Y6J9 622 aa14.8□□□□□ -0.04
RTN4-202ENST00000337526 SPATA31A3Q5VYP0 1347 aa14.79□□□□□ -0.04
RTN4-202ENST00000337526 ABCD1P33897 745 aa14.79□□□□□ -0.04
RTN4-202ENST00000337526 SH3BGRP55822 239 aaPredicted RBP14.79□□□□□ -0.04
RTN4-202ENST00000337526 GPC5P78333 572 aa14.79□□□□□ -0.04
RTN4-202ENST00000337526 ITKQ08881 620 aa14.79□□□□□ -0.04
RTN4-202ENST00000337526 RBBP5Q15291 538 aaKnown RBP14.79□□□□□ -0.04
RTN4-202ENST00000337526 MIS18BP1Q6P0N0 1132 aa14.79□□□□□ -0.04
RTN4-202ENST00000337526 FAM160B2Q86V87 743 aa14.79□□□□□ -0.04
RTN4-202ENST00000337526 XXYLT1Q8NBI6 393 aa14.79□□□□□ -0.04
RTN4-202ENST00000337526 KCTD6Q8NC69 237 aa14.79□□□□□ -0.04
RTN4-202ENST00000337526 FAM20AQ96MK3 541 aa14.79□□□□□ -0.04
RTN4-202ENST00000337526 TUBE1Q9UJT0 475 aa14.79□□□□□ -0.04
RTN4-202ENST00000337526 CACNB3P54284 484 aa14.79□□□□□ -0.04
RTN4-202ENST00000337526 ORC2Q13416 577 aaPredicted RBP14.79□□□□□ -0.04
RTN4-202ENST00000337526 KCNB1Q14721 858 aa14.79□□□□□ -0.04
RTN4-202ENST00000337526 CD209Q9NNX6 404 aa14.79□□□□□ -0.04
RTN4-202ENST00000337526 PNPLA7Q6ZV29 1317 aa14.79□□□□□ -0.04
RTN4-202ENST00000337526 RAPH1Q70E73 1250 aa14.79□□□□□ -0.04
RTN4-202ENST00000337526 MIGA2Q7L4E1 593 aa14.79□□□□□ -0.04
RTN4-202ENST00000337526 C7orf31Q8N865 590 aa14.79□□□□□ -0.04
RTN4-202ENST00000337526 IGDCC4Q8TDY8 1250 aa14.79□□□□□ -0.04
RTN4-202ENST00000337526 PACSIN2Q9UNF0 486 aaPredicted RBP14.79□□□□□ -0.04
RTN4-202ENST00000337526 IFRD2Q12894 506 aaPredicted RBP14.78□□□□□ -0.04
RTN4-202ENST00000337526 KCTD2Q14681 263 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 PDXDC2PQ6P474 469 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 DNAAF3Q8N9W5 541 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 ADAM22Q9P0K1 906 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 LIMA1Q9UHB6 759 aaKnown RBP14.78□□□□□ -0.04
RTN4-202ENST00000337526 UTYO14607 1347 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 CDC42BPAQ5VT25 1732 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 USP17L10C9JJH3 530 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 CYP19A1P11511 503 aaPredicted RBP14.78□□□□□ -0.04
RTN4-202ENST00000337526 ANKRD40Q6AI12 368 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 USP49Q70CQ1 688 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 SRBD1Q8N5C6 995 aaKnown RBP14.78□□□□□ -0.04
RTN4-202ENST00000337526 CCDC68Q9H2F9 335 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 PPP1R9AQ9ULJ8 1098 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 TPX2Q9ULW0 747 aaKnown RBP14.78□□□□□ -0.04
RTN4-202ENST00000337526 CPDO75976 1380 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 GMNCA6NCL1 334 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 FAM205CA6NFA0 338 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 MED7O43513 233 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 ORC4O43929 436 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 SMIM24O75264 130 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 RAD17O75943 681 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 TDP2O95551 362 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 FXR1P51114 621 aaKnown RBP eCLIP14.78□□□□□ -0.049e-8■■■■□ 20
RTN4-202ENST00000337526 COG7P83436 770 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 ZNF211Q13398 564 aaPredicted RBP14.78□□□□□ -0.04
RTN4-202ENST00000337526 TAF11Q15544 211 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 FAM47CQ5HY64 1035 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 TUBB6Q9BUF5 446 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 APOL6Q9BWW8 343 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 EDEM3Q9BZQ6 932 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 TAF1DQ9H5J8 278 aaPredicted RBP14.78□□□□□ -0.04
RTN4-202ENST00000337526 ADD3Q9UEY8 706 aaKnown RBP14.78□□□□□ -0.04
RTN4-202ENST00000337526 RPS6KA4O75676 772 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 ESRRAP11474 423 aaPredicted RBP14.78□□□□□ -0.04
RTN4-202ENST00000337526 OSTNP61366 133 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 PCGF5Q86SE9 256 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 RPAINQ86UA6 219 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 FBXO41Q8TF61 875 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 HEMGNQ9BXL5 484 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 TRIM9Q9C026 710 aa14.78□□□□□ -0.04
RTN4-202ENST00000337526 POTEFA5A3E0 1075 aa14.77□□□□□ -0.04
RTN4-202ENST00000337526 CHUKO15111 745 aa14.77□□□□□ -0.04
RTN4-202ENST00000337526 MAPK13O15264 365 aa14.77□□□□□ -0.04
RTN4-202ENST00000337526 POTEIP0CG38 1075 aa14.77□□□□□ -0.04
RTN4-202ENST00000337526 OR6B2Q6IFH4 312 aa14.77□□□□□ -0.04
RTN4-202ENST00000337526 POTEGQ6S5H5 508 aa14.77□□□□□ -0.04
RTN4-202ENST00000337526 POTEEQ6S8J3 1075 aa14.77□□□□□ -0.04
RTN4-202ENST00000337526 STAG2Q8N3U4 1231 aa14.77□□□□□ -0.04
RTN4-202ENST00000337526 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.77□□□□□ -0.047e-8■■□□□ 13.4
RTN4-202ENST00000337526 SCINQ9Y6U3 715 aa14.77□□□□□ -0.04
RTN4-202ENST00000337526 ZBTB33Q86T24 672 aa14.77□□□□□ -0.04
RTN4-202ENST00000337526 CCSER1Q9C0I3 900 aa14.77□□□□□ -0.04
RTN4-202ENST00000337526 USP31Q70CQ4 1352 aa14.77□□□□□ -0.05
RTN4-202ENST00000337526 IPO5O00410 1097 aaKnown RBP14.77□□□□□ -0.05
RTN4-202ENST00000337526 ABL1P00519 1130 aa14.77□□□□□ -0.05
RTN4-202ENST00000337526 FDPSP14324 419 aaKnown RBP14.77□□□□□ -0.05
RTN4-202ENST00000337526 ARL4AP40617 200 aa14.77□□□□□ -0.05
RTN4-202ENST00000337526 DRAP1Q14919 205 aaPredicted RBP14.77□□□□□ -0.05
RTN4-202ENST00000337526 NAALADL2Q58DX5 795 aa14.77□□□□□ -0.05
RTN4-202ENST00000337526 FAM47EQ6ZV65 393 aa14.77□□□□□ -0.05
RTN4-202ENST00000337526 FAM84BQ96KN1 310 aaPredicted RBP14.77□□□□□ -0.05
RTN4-202ENST00000337526 AKT3Q9Y243 479 aa14.77□□□□□ -0.05
RTN4-202ENST00000337526 PRPSAP2O60256 369 aa14.77□□□□□ -0.05
RTN4-202ENST00000337526 ERICH1Q86X53 443 aa14.77□□□□□ -0.05
RTN4-202ENST00000337526 DCAF4Q8WV16 495 aa14.77□□□□□ -0.05
RTN4-202ENST00000337526 NLRP7Q8WX94 980 aa14.77□□□□□ -0.05
RTN4-202ENST00000337526 SLC5A4Q9NY91 659 aa14.77□□□□□ -0.05
RTN4-202ENST00000337526 NUB1Q9Y5A7 615 aa14.77□□□□□ -0.05
RTN4-202ENST00000337526 TARSL2A2RTX5 802 aaKnown RBP14.76□□□□□ -0.05
RTN4-202ENST00000337526 RASA4BC9J798 803 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 RASA4O43374 803 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 XPOTO43592 962 aaKnown RBP14.76□□□□□ -0.05
RTN4-202ENST00000337526 PSAPP07602 524 aa14.76□□□□□ -0.05
RTN4-202ENST00000337526 SKIP12755 728 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms