RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 ZNF394Q53GI3 561 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 OLFML2BQ68BL8 750 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 DEPDC7Q96QD5 511 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 TRIM51Q9BSJ1 452 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 TEX13BQ9BXU2 312 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 EPC1Q9H2F5 836 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 ANAPC7Q9UJX3 599 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 BAIAP2Q9UQB8 552 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 SRRM3A6NNA2 597 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 TBC1D4O60343 1298 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 UQCRBP14927 111 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 TTKP33981 857 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 GRK3P35626 688 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 SERPINB4P48594 390 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 SMTNP53814 917 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 TCEAL6Q6IPX3 200 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 FAM47EQ6ZV65 393 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 PIK3C3Q8NEB9 887 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 FCGR1BQ92637 280 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 ARL5BQ96KC2 179 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 PPP1R36Q96LQ0 422 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 DFFAO00273 331 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 ITGAXP20702 1163 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 SERPINH1P50454 418 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 SQLEQ14534 574 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 KRT40Q6A162 431 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 ABRAXAS1Q6UWZ7 409 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 DYMQ7RTS9 669 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 SUGP1Q8IWZ8 645 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 SAMD14Q8IZD0 417 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 C10orf53Q8N6V4 93 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 TYW1Q9NV66 732 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 CCDC61Q9Y6R9 512 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 TRIP11Q15643 1979 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 THOC2Q8NI27 1593 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 FOXN3O00409 490 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 FPGTO14772 594 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 MAP4P27816 1152 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 PTPN6P29350 595 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 COX10Q12887 443 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 HERC4Q5GLZ8 1057 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 ANKRD26P1Q6NSI1 321 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 LRRC20Q8TCA0 184 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 POMGNT1Q8WZA1 660 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 MTBPQ96DY7 904 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 ZFRQ96KR1 1074 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 HINFPQ9BQA5 517 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 HMG20AQ9NP66 347 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 SH2B1Q9NRF2 756 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 PLEKHG3A1L390 1219 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 ECE2O60344 883 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 CCDC166P0CW27 439 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 TCP1P17987 556 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 IQCB1Q15051 598 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 C7orf25Q9BPX7 421 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 HACD3Q9P035 362 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 USTQ9Y2C2 406 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 MYCLP12524 364 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 MAGEA3P43357 314 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 GUK1Q16774 197 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 ALFQ53S48 1182 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 C11orf74Q86VG3 221 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 LRRC8AQ8IWT6 810 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 PARP9Q8IXQ6 854 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 MIGA1Q8NAN2 632 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 MAIP1Q8WWC4 291 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 ZC3H10Q96K80 434 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 BTBD6Q96KE9 485 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 THTPAQ9BU02 230 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 ARHGEF3Q9NR81 526 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 RMND1Q9NWS8 449 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 CACNA2D2Q9NY47 1150 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 STON1Q9Y6Q2 735 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 SUPT6HQ7KZ85 1726 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 RPS2P15880 293 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 SAT1P21673 171 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 ARF3P61204 181 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 ARF1P84077 181 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 GPR139Q6DWJ6 353 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 TMTC3Q6ZXV5 915 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 ABTB2Q8N961 1025 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 LPIN2Q92539 896 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 RABGGTAQ92696 567 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 MYH4Q9Y623 1939 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 DYNC1LI2O43237 492 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 PCSK2P16519 638 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 PPP1R2P41236 205 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 NEK4P51957 841 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 RAB4BP61018 213 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 UBXN11Q5T124 520 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 ZNF589Q86UQ0 364 aaPredicted RBP6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 SPERTQ8NA61 448 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 TBC1D5Q92609 795 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 FICDQ9BVA6 458 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 SENP1Q9P0U3 644 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 STRIP2Q9ULQ0 834 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 TBX22Q9Y458 520 aa6.47□□□□□ -1.37
CDC42BPA-201ENST00000334218 MSH5O43196 834 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms