RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 ERICH4A6NGS2 130 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 SPDYE2BA6NHP3 402 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 EML1O00423 815 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 TGFB1I1O43294 461 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 N4BP1O75113 896 aaKnown RBP11.76□□□□□ -0.53
CCDC172-201ENST00000333254 RNF40O75150 1001 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 PALMO75781 387 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 FAM13AO94988 1023 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 VIL1P09327 827 aaKnown RBP11.76□□□□□ -0.53
CCDC172-201ENST00000333254 SPDYE6P0CI01 402 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 MYBP10242 640 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 MYBL2P10244 700 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 BCRP11274 1271 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 GUCY2CP25092 1073 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 PSMC2P35998 433 aaKnown RBP11.76□□□□□ -0.53
CCDC172-201ENST00000333254 TNNT3P45378 269 aaPredicted RBP11.76□□□□□ -0.53
CCDC172-201ENST00000333254 RRP1BQ14684 758 aaKnown RBP11.76□□□□□ -0.53
CCDC172-201ENST00000333254 ZSCAN26Q16670 478 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 KIAA0753Q2KHM9 967 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 LRCH2Q5VUJ6 765 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 LEKR1Q6ZMV7 388 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 FAM133AQ8N9E0 248 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 MTMR14Q8NCE2 650 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 C1orf131Q8NDD1 294 aaKnown RBP11.76□□□□□ -0.53
CCDC172-201ENST00000333254 AFAP1L1Q8TED9 768 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 CALR3Q96L12 384 aaKnown RBP11.76□□□□□ -0.53
CCDC172-201ENST00000333254 PRMT6Q96LA8 375 aaPredicted RBP11.76□□□□□ -0.53
CCDC172-201ENST00000333254 NACC1Q96RE7 527 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 GMLQ99445 158 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 RIT2Q99578 217 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 WDR18Q9BV38 432 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 VCPKMTQ9H867 229 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 PARVGQ9HBI0 331 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 DMAC2Q9NW81 257 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 DMGDHQ9UI17 866 aaKnown RBP11.76□□□□□ -0.53
CCDC172-201ENST00000333254 ZBTB21Q9ULJ3 1066 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 PARP14Q460N5 1801 aa11.76□□□□□ -0.53
CCDC172-201ENST00000333254 SHTN1A0MZ66 631 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 A6NNZ2 444 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 MEIS1O00470 390 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 RAD21O60216 631 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 OPA1O60313 960 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 SLITRK3O94933 977 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 GCNT3O95395 438 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 LMAN1P49257 510 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 HNRNPH2P55795 449 aaKnown RBP11.75□□□□□ -0.53
CCDC172-201ENST00000333254 MCCD1P59942 119 aaPredicted RBP11.75□□□□□ -0.53
CCDC172-201ENST00000333254 MAP3K10Q02779 954 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 PTK2Q05397 1052 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 AOC3Q16853 763 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 TUBB8Q3ZCM7 444 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 CEP55Q53EZ4 464 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 SLFN11Q7Z7L1 901 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 FAM83AQ86UY5 434 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 IFT20Q8IY31 132 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 LRRC57Q8N9N7 239 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 FIZ1Q96SL8 496 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 STRA6Q9BX79 667 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 ZHX3Q9H4I2 956 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 NAGPAQ9UK23 515 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 FER1L6Q2WGJ9 1857 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 RPTORQ8N122 1335 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 GOLGA6BA6NDN3 693 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 YDJCA8MPS7 323 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 BHMG1C9JSJ3 638 aaPredicted RBP11.75□□□□□ -0.53
CCDC172-201ENST00000333254 GOLGA8KD6RF30 607 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 AGPSO00116 658 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 BUB1O43683 1085 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 SHOX2O60902 331 aaPredicted RBP11.75□□□□□ -0.53
CCDC172-201ENST00000333254 PPP1R37O75864 691 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 APBA3O96018 575 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 CCDC172P0C7W6 258 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 SLC9A1P19634 815 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 TNNC1P63316 161 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 RAD51AP2Q09MP3 1159 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 PAK2Q13177 524 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 SPDYE2Q495Y8 402 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 RSBN1LQ6PCB5 846 aaPredicted RBP11.75□□□□□ -0.53
CCDC172-201ENST00000333254 ZNF571Q7Z3V5 609 aaPredicted RBP11.75□□□□□ -0.53
CCDC172-201ENST00000333254 ACTRT1Q8TDG2 376 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 LMBR1Q8WVP7 490 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 DRC1Q96MC2 740 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 PSMD1Q99460 953 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 FAM204AQ9H8W3 233 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 RBM12Q9NTZ6 932 aaKnown RBP11.75□□□□□ -0.53
CCDC172-201ENST00000333254 MAP3K20Q9NYL2 800 aaKnown RBP11.75□□□□□ -0.53
CCDC172-201ENST00000333254 ADAMTS1Q9UHI8 967 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 FEM1BQ9UK73 627 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 CNTNAP1P78357 1384 aa11.75□□□□□ -0.53
CCDC172-201ENST00000333254 NCANO14594 1321 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 RSPH10B2B2RC85 870 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 MAPK13O15264 365 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 NCK2O43639 380 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 GAS7O60861 476 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 KIF4AO95239 1232 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 RSPH10BP0C881 870 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 ZBTB48P10074 688 aaPredicted RBP11.74□□□□□ -0.53
CCDC172-201ENST00000333254 CAPN2P17655 700 aa11.74□□□□□ -0.53
CCDC172-201ENST00000333254 HOXA13P31271 388 aaPredicted RBP11.74□□□□□ -0.53
CCDC172-201ENST00000333254 DSG3P32926 999 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms