RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 PIK3CAP42336 1068 aa11.96□□□□□ -0.49
TOP3A-201ENST00000321105 EPC2Q52LR7 807 aa11.96□□□□□ -0.49
TOP3A-201ENST00000321105 C7orf25Q9BPX7 421 aa11.96□□□□□ -0.49
TOP3A-201ENST00000321105 LACRTQ9GZZ8 138 aa11.96□□□□□ -0.49
TOP3A-201ENST00000321105 KBTBD4Q9NVX7 518 aa11.96□□□□□ -0.49
TOP3A-201ENST00000321105 FAM184BQ9ULE4 1060 aa11.96□□□□□ -0.49
TOP3A-201ENST00000321105 UTP11Q9Y3A2 253 aaKnown RBP11.96□□□□□ -0.49
TOP3A-201ENST00000321105 A0A1W2PRG0 241 aa11.96□□□□□ -0.5
TOP3A-201ENST00000321105 CYP11B2P19099 503 aa11.96□□□□□ -0.5
TOP3A-201ENST00000321105 SEZ6Q53EL9 994 aa11.96□□□□□ -0.5
TOP3A-201ENST00000321105 CEP85LQ5SZL2 805 aa11.96□□□□□ -0.5
TOP3A-201ENST00000321105 C10orf67Q8IYJ2 551 aa11.96□□□□□ -0.5
TOP3A-201ENST00000321105 ZNF653Q96CK0 615 aa11.96□□□□□ -0.5
TOP3A-201ENST00000321105 NT5C1BQ96P26 610 aa11.96□□□□□ -0.5
TOP3A-201ENST00000321105 RASAL2Q9UJF2 1139 aa11.96□□□□□ -0.5
TOP3A-201ENST00000321105 FAN1Q9Y2M0 1017 aa11.96□□□□□ -0.5
TOP3A-201ENST00000321105 SYNJ2BP-COX16A0A087WUM0 186 aa11.96□□□□□ -0.5
TOP3A-201ENST00000321105 WNT10BO00744 389 aa11.96□□□□□ -0.5
TOP3A-201ENST00000321105 OPA1O60313 960 aa11.96□□□□□ -0.5
TOP3A-201ENST00000321105 TMEM191BP0C7N4 346 aa11.96□□□□□ -0.5
TOP3A-201ENST00000321105 KCNA1Q09470 495 aa11.96□□□□□ -0.5
TOP3A-201ENST00000321105 DRAP1Q14919 205 aaPredicted RBP11.96□□□□□ -0.5
TOP3A-201ENST00000321105 KRT71Q3SY84 523 aa11.96□□□□□ -0.5
TOP3A-201ENST00000321105 HAUS6Q7Z4H7 955 aa11.96□□□□□ -0.5
TOP3A-201ENST00000321105 UBL4BQ8N7F7 174 aa11.96□□□□□ -0.5
TOP3A-201ENST00000321105 COX16Q9P0S2 106 aa11.96□□□□□ -0.5
TOP3A-201ENST00000321105 CHD2O14647 1828 aaKnown RBP11.95□□□□□ -0.5
TOP3A-201ENST00000321105 SERPING1P05155 500 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 GBP2P32456 591 aaPredicted RBP11.95□□□□□ -0.5
TOP3A-201ENST00000321105 PDE6CP51160 858 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 KIAA0895Q8NCT3 520 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 IKZF4Q9H2S9 585 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 INTS13Q9NVM9 706 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 PCDHB4Q9Y5E5 795 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 STK24Q9Y6E0 443 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 CCND2P30279 289 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 ACOT2P49753 483 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 TTI2Q6NXR4 508 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 SCYL2Q6P3W7 929 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 ZNF365Q70YC5 407 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 REXO1L1PQ8IX06 675 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 CCDC170Q8IYT3 715 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 PROM2Q8N271 834 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.95□□□□□ -0.5
TOP3A-201ENST00000321105 NOA1Q8NC60 698 aaKnown RBP11.95□□□□□ -0.5
TOP3A-201ENST00000321105 MGARPQ8TDB4 240 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 IWS1Q96ST2 819 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 CAPN11Q9UMQ6 739 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 JRKLQ9Y4A0 524 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 FHOD1Q9Y613 1164 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 EMSYQ7Z589 1322 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 WDR64B1ANS9 1081 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 P4HBP07237 508 aaKnown RBP11.95□□□□□ -0.5
TOP3A-201ENST00000321105 C2CD6Q53TS8 623 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 STYK1Q6J9G0 422 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 NSUN6Q8TEA1 469 aaKnown RBP11.95□□□□□ -0.5
TOP3A-201ENST00000321105 AFAP1L1Q8TED9 768 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 PODXL2Q9NZ53 605 aa11.95□□□□□ -0.5
TOP3A-201ENST00000321105 NR3C2P08235 984 aa11.94□□□□□ -0.5
TOP3A-201ENST00000321105 CAP2P40123 477 aa11.94□□□□□ -0.5
TOP3A-201ENST00000321105 ZNF710Q8N1W2 664 aa11.94□□□□□ -0.5
TOP3A-201ENST00000321105 KIF1AQ12756 1690 aa11.94□□□□□ -0.5
TOP3A-201ENST00000321105 YWHABP31946 246 aaKnown RBP11.94□□□□□ -0.5
TOP3A-201ENST00000321105 MDM2Q00987 491 aaPredicted RBP11.94□□□□□ -0.5
TOP3A-201ENST00000321105 BRD3Q15059 726 aa11.94□□□□□ -0.5
TOP3A-201ENST00000321105 NAALADL2Q58DX5 795 aa11.94□□□□□ -0.5
TOP3A-201ENST00000321105 ZNF354CQ86Y25 554 aa11.94□□□□□ -0.5
TOP3A-201ENST00000321105 GOLGA5Q8TBA6 731 aa11.94□□□□□ -0.5
TOP3A-201ENST00000321105 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.94□□□□□ -0.5
TOP3A-201ENST00000321105 MAGOHBQ96A72 148 aaKnown RBP11.94□□□□□ -0.5
TOP3A-201ENST00000321105 PPANQ9NQ55 473 aaKnown RBP11.94□□□□□ -0.5
TOP3A-201ENST00000321105 CALCOCO1Q9P1Z2 691 aa11.94□□□□□ -0.5
TOP3A-201ENST00000321105 NFU1Q9UMS0 254 aa11.94□□□□□ -0.5
TOP3A-201ENST00000321105 NOD1Q9Y239 953 aa11.94□□□□□ -0.5
TOP3A-201ENST00000321105 SARSP49591 514 aaKnown RBP11.94□□□□□ -0.5
TOP3A-201ENST00000321105 PLTPP55058 493 aa11.94□□□□□ -0.5
TOP3A-201ENST00000321105 BSPRYQ5W0U4 402 aa11.94□□□□□ -0.5
TOP3A-201ENST00000321105 NYAP1Q6ZVC0 841 aa11.94□□□□□ -0.5
TOP3A-201ENST00000321105 XXYLT1Q8NBI6 393 aa11.94□□□□□ -0.5
TOP3A-201ENST00000321105 SLC10A4Q96EP9 437 aa11.94□□□□□ -0.5
TOP3A-201ENST00000321105 PNMA5Q96PV4 448 aa11.94□□□□□ -0.5
TOP3A-201ENST00000321105 MTRQ99707 1265 aa11.94□□□□□ -0.5
TOP3A-201ENST00000321105 NRBP2Q9NSY0 501 aa11.94□□□□□ -0.5
TOP3A-201ENST00000321105 TYW1Q9NV66 732 aaKnown RBP11.94□□□□□ -0.5
TOP3A-201ENST00000321105 RGPD5Q99666 1765 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 PEX10O60683 326 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 EYA4O95677 639 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 ABL1P00519 1130 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 MYZAPP0CAP1 466 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 ZNF18P17022 549 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 CTNNA1P35221 906 aaKnown RBP11.93□□□□□ -0.5
TOP3A-201ENST00000321105 VSNL1P62760 191 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 IFRD2Q12894 506 aaPredicted RBP11.93□□□□□ -0.5
TOP3A-201ENST00000321105 PAK2Q13177 524 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 PPP2R5DQ14738 602 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 CRY2Q49AN0 593 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 ZBTB8OSQ8IWT0 167 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 DDX47Q9H0S4 455 aaKnown RBP11.93□□□□□ -0.5
TOP3A-201ENST00000321105 GOLGA6L7A0A1B0GV03 622 aa11.93□□□□□ -0.5
TOP3A-201ENST00000321105 EML1O00423 815 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms