RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 ZC3H12BQ5HYM0 836 aaKnown RBP18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 RNF123Q5XPI4 1314 aa18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 WDR17Q8IZU2 1322 aa18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 MIF4GDA9UHW6 222 aaKnown RBP18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 DAB1O75553 588 aa18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 STX19Q8N4C7 294 aa18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 AMNQ9BXJ7 453 aa18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 MLH3Q9UHC1 1453 aa18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 PABPC4Q13310 644 aaKnown RBP eCLIP18.05■□□□□ 0.487e-15■■■□□ 18.4
SMCHD1-201ENST00000320876 BPIFA3Q9BQP9 254 aa18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 DDX28Q9NUL7 540 aaKnown RBP18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 DIAPH2O60879 1101 aa18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 DNAJC6O75061 913 aa18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 PAPOLAP51003 745 aaKnown RBP18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 PMS1P54277 932 aaKnown RBP18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 DLGAP5Q15398 846 aa18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 ZNF711Q9Y462 761 aa18.05■□□□□ 0.48
SMCHD1-201ENST00000320876 PIK3R2O00459 728 aa18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 CARSP49589 748 aaKnown RBP18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 DCAF15Q66K64 600 aa18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 GCOM2Q9BZD3 368 aaPredicted RBP18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 CCDC90BQ9GZT6 254 aa18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 CYP26B1Q9NR63 512 aa18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 ADA2Q9NZK5 511 aa18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 AKT3Q9Y243 479 aa18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 DEAF1O75398 565 aaPredicted RBP18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 TFAMQ00059 246 aaKnown RBP18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 SURF1Q15526 300 aa18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 TRIM45Q9H8W5 580 aaPredicted RBP18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 TCIRG1Q13488 830 aa18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 CEP55Q53EZ4 464 aa18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 RAPGEF5Q92565 580 aa18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 IRAK4Q9NWZ3 460 aa18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 CROCC2H7BZ55 1655 aa18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 DDIT3P35638 169 aa18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 GRIN1Q05586 938 aa18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 GRAMD1AQ96CP6 724 aa18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 BAZ2BQ9UIF8 2168 aaKnown RBP18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 PALMO75781 387 aa18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 KITP10721 976 aa18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 FAM149B1Q96BN6 582 aa18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 WDR11Q9BZH6 1224 aa18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 FAM95CA0A1B0GW59 222 aa18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 TOGARAM2Q6ZUX3 1019 aa18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 NDST4Q9H3R1 872 aa18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 ABHD10Q9NUJ1 306 aa18.04■□□□□ 0.48
SMCHD1-201ENST00000320876 RAD23BP54727 409 aa18.03■□□□□ 0.48
SMCHD1-201ENST00000320876 CCDC85BQ15834 202 aaPredicted RBP18.03■□□□□ 0.48
SMCHD1-201ENST00000320876 CIITAP33076 1130 aa18.03■□□□□ 0.48
SMCHD1-201ENST00000320876 DTNBO60941 627 aa18.03■□□□□ 0.48
SMCHD1-201ENST00000320876 MXI1P50539 228 aa18.03■□□□□ 0.48
SMCHD1-201ENST00000320876 EPAS1Q99814 870 aa18.03■□□□□ 0.48
SMCHD1-201ENST00000320876 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.03■□□□□ 0.48
SMCHD1-201ENST00000320876 CTIFO43310 598 aaKnown RBP18.03■□□□□ 0.48
SMCHD1-201ENST00000320876 PATL1Q86TB9 770 aaKnown RBP18.03■□□□□ 0.48
SMCHD1-201ENST00000320876 TBC1D23Q9NUY8 699 aa18.03■□□□□ 0.48
SMCHD1-201ENST00000320876 TARSL2A2RTX5 802 aaKnown RBP18.03■□□□□ 0.48
SMCHD1-201ENST00000320876 CC2D1AQ6P1N0 951 aaPredicted RBP18.03■□□□□ 0.48
SMCHD1-201ENST00000320876 CCDC87Q9NVE4 849 aa18.03■□□□□ 0.48
SMCHD1-201ENST00000320876 CCDC22O60826 627 aa18.03■□□□□ 0.48
SMCHD1-201ENST00000320876 KRT31Q15323 416 aa18.03■□□□□ 0.48
SMCHD1-201ENST00000320876 HSPH1Q92598 858 aa18.03■□□□□ 0.48
SMCHD1-201ENST00000320876 HAUS5O94927 633 aa18.02■□□□□ 0.48
SMCHD1-201ENST00000320876 S100A5P33763 92 aa18.02■□□□□ 0.48
SMCHD1-201ENST00000320876 MECOMQ03112 1051 aa18.02■□□□□ 0.48
SMCHD1-201ENST00000320876 NLRP14Q86W24 1093 aa18.02■□□□□ 0.48
SMCHD1-201ENST00000320876 TTC8Q8TAM2 541 aa18.02■□□□□ 0.48
SMCHD1-201ENST00000320876 EML4Q9HC35 981 aaKnown RBP18.02■□□□□ 0.48
SMCHD1-201ENST00000320876 ABCC10Q5T3U5 1492 aa18.02■□□□□ 0.48
SMCHD1-201ENST00000320876 CEBPAP49715 358 aaPredicted RBP18.02■□□□□ 0.48
SMCHD1-201ENST00000320876 OTUB1Q96FW1 271 aaPredicted RBP18.02■□□□□ 0.48
SMCHD1-201ENST00000320876 SAMSN1Q9NSI8 373 aaKnown RBP18.02■□□□□ 0.48
SMCHD1-201ENST00000320876 GTSE1Q9NYZ3 720 aa18.02■□□□□ 0.48
SMCHD1-201ENST00000320876 SLC8A2Q9UPR5 921 aa18.02■□□□□ 0.48
SMCHD1-201ENST00000320876 SRPRBQ9Y5M8 271 aaKnown RBP18.02■□□□□ 0.48
SMCHD1-201ENST00000320876 FAM47CQ5HY64 1035 aa18.02■□□□□ 0.48
SMCHD1-201ENST00000320876 TTC13Q8NBP0 860 aa18.02■□□□□ 0.48
SMCHD1-201ENST00000320876 LRRC4Q9HBW1 653 aa18.02■□□□□ 0.48
SMCHD1-201ENST00000320876 G3BP2Q9UN86 482 aaKnown RBP18.02■□□□□ 0.48
SMCHD1-201ENST00000320876 GOLGA4Q13439 2230 aaKnown RBP18.02■□□□□ 0.48
SMCHD1-201ENST00000320876 KRT75O95678 551 aa18.02■□□□□ 0.48
SMCHD1-201ENST00000320876 PLCG1P19174 1290 aa18.02■□□□□ 0.48
SMCHD1-201ENST00000320876 SZRD1Q7Z422 152 aa18.02■□□□□ 0.48
SMCHD1-201ENST00000320876 FAM47EQ6ZV65 393 aa18.02■□□□□ 0.47
SMCHD1-201ENST00000320876 PROM2Q8N271 834 aa18.02■□□□□ 0.47
SMCHD1-201ENST00000320876 ETNK1Q9HBU6 452 aa18.02■□□□□ 0.47
SMCHD1-201ENST00000320876 CATSPER3Q86XQ3 398 aa18.02■□□□□ 0.47
SMCHD1-201ENST00000320876 FAM161BQ96MY7 647 aa18.02■□□□□ 0.47
SMCHD1-201ENST00000320876 ATP11BQ9Y2G3 1177 aa18.02■□□□□ 0.47
SMCHD1-201ENST00000320876 SORBS3O60504 671 aa18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 ESRRBO95718 433 aa18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 APOA5Q6Q788 366 aa18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 IL10P22301 178 aa18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 ANXA13P27216 316 aa18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 CCND2P30279 289 aa18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 MED21Q13503 144 aa18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 UBE3CQ15386 1083 aa18.01■□□□□ 0.47
SMCHD1-201ENST00000320876 IMPG1Q17R60 797 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms