RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 GFPT2O94808 682 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 TUBBP07437 444 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 MCM3P25205 808 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 PON1P27169 355 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 C8orf74Q6P047 294 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 BTNL9Q6UXG8 535 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 HS2ST1Q7LGA3 356 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 TXLNBQ8N3L3 684 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 LXNQ9BS40 222 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 SELENOOQ9BVL4 669 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 EDEM3Q9BZQ6 932 aa12.65□□□□□ -0.38
PTPN2-201ENST00000309660 RBM12Q9NTZ6 932 aaKnown RBP12.65□□□□□ -0.38
PTPN2-201ENST00000309660 WRAP73Q9P2S5 460 aaPredicted RBP12.65□□□□□ -0.38
PTPN2-201ENST00000309660 ATRNL1Q5VV63 1379 aa12.65□□□□□ -0.39
PTPN2-201ENST00000309660 PPP1R12BO60237 982 aaPredicted RBP12.64□□□□□ -0.39
PTPN2-201ENST00000309660 PRELPP51888 382 aa12.64□□□□□ -0.39
PTPN2-201ENST00000309660 GBP6Q6ZN66 633 aa12.64□□□□□ -0.39
PTPN2-201ENST00000309660 IFT81Q8WYA0 676 aa12.64□□□□□ -0.39
PTPN2-201ENST00000309660 GANQ9H2C0 597 aa12.64□□□□□ -0.39
PTPN2-201ENST00000309660 UNC45AQ9H3U1 944 aa12.64□□□□□ -0.39
PTPN2-201ENST00000309660 PCIF1Q9H4Z3 704 aa12.64□□□□□ -0.39
PTPN2-201ENST00000309660 TRAF3IP3Q9Y228 551 aa12.64□□□□□ -0.39
PTPN2-201ENST00000309660 NRXN2Q9P2S2 1712 aa12.64□□□□□ -0.39
PTPN2-201ENST00000309660 CCDC66A2RUB6 948 aa12.64□□□□□ -0.39
PTPN2-201ENST00000309660 NPM3O75607 178 aaKnown RBP12.64□□□□□ -0.39
PTPN2-201ENST00000309660 ZNF571Q7Z3V5 609 aaPredicted RBP12.64□□□□□ -0.39
PTPN2-201ENST00000309660 FRMD5Q7Z6J6 570 aa12.64□□□□□ -0.39
PTPN2-201ENST00000309660 GOLGA6L1Q8N7Z2 621 aa12.64□□□□□ -0.39
PTPN2-201ENST00000309660 HOOK2Q96ED9 719 aa12.64□□□□□ -0.39
PTPN2-201ENST00000309660 HSD17B14Q9BPX1 270 aa12.64□□□□□ -0.39
PTPN2-201ENST00000309660 POLR3CQ9BUI4 534 aaPredicted RBP12.64□□□□□ -0.39
PTPN2-201ENST00000309660 UBXN6Q9BZV1 441 aa12.64□□□□□ -0.39
PTPN2-201ENST00000309660 CTDP1Q9Y5B0 961 aaPredicted RBP12.64□□□□□ -0.39
PTPN2-201ENST00000309660 NFIBO00712 420 aa12.64□□□□□ -0.39
PTPN2-201ENST00000309660 CAPN2P17655 700 aa12.64□□□□□ -0.39
PTPN2-201ENST00000309660 INPP5BP32019 993 aa12.64□□□□□ -0.39
PTPN2-201ENST00000309660 MAPK8IP2Q13387 824 aaPredicted RBP12.64□□□□□ -0.39
PTPN2-201ENST00000309660 ARHGAP44Q17R89 818 aa12.64□□□□□ -0.39
PTPN2-201ENST00000309660 TCEAL9Q9UHQ7 104 aa12.64□□□□□ -0.39
PTPN2-201ENST00000309660 AJAP1Q9UKB5 411 aaPredicted RBP12.64□□□□□ -0.39
PTPN2-201ENST00000309660 TGFB1I1O43294 461 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 PSMD10O75832 226 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 LCA5LO95447 670 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 MYCLP12524 364 aaPredicted RBP12.63□□□□□ -0.39
PTPN2-201ENST00000309660 DPEP1P16444 411 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 GRIPAP1Q4V328 841 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 AEBP2Q6ZN18 517 aaPredicted RBP12.63□□□□□ -0.39
PTPN2-201ENST00000309660 KLHL7Q8IXQ5 586 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 NIM1KQ8IY84 436 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 TAF4BQ92750 862 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 SLC35C1Q96A29 364 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 TEKT3Q9BXF9 490 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 EHMT1Q9H9B1 1298 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 ARFGEF1Q9Y6D6 1849 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 TMEM150BA6NC51 233 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 ZSCAN5CA6NGD5 496 aaPredicted RBP12.63□□□□□ -0.39
PTPN2-201ENST00000309660 KCNK3O14649 394 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 EXOC3O60645 756 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 EIF2AK2P19525 551 aaKnown RBP12.63□□□□□ -0.39
PTPN2-201ENST00000309660 ABCB4P21439 1286 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 CFAP221Q4G0U5 840 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 ALKBH5Q6P6C2 394 aaKnown RBP12.63□□□□□ -0.39
PTPN2-201ENST00000309660 CCNI2Q6ZMN8 369 aaPredicted RBP12.63□□□□□ -0.39
PTPN2-201ENST00000309660 PROCA1Q8NCQ7 364 aaPredicted RBP12.63□□□□□ -0.39
PTPN2-201ENST00000309660 RBM46Q8TBY0 533 aaKnown RBP12.63□□□□□ -0.39
PTPN2-201ENST00000309660 U2AF1L4Q8WU68 220 aaKnown RBP12.63□□□□□ -0.39
PTPN2-201ENST00000309660 WDR11Q9BZH6 1224 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 RAVER2Q9HCJ3 691 aaKnown RBP12.63□□□□□ -0.39
PTPN2-201ENST00000309660 TISP43B9A030 160 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 PIK3CDO00329 1044 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 LRRN2O75325 713 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 CAP2P40123 477 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 MMP14P50281 582 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 MARSP56192 900 aaKnown RBP12.63□□□□□ -0.39
PTPN2-201ENST00000309660 TRAF1Q13077 416 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 EPM2AIP1Q7L775 607 aaPredicted RBP12.63□□□□□ -0.39
PTPN2-201ENST00000309660 MIER3Q7Z3K6 550 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 IL31RAQ8NI17 732 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 FAM204AQ9H8W3 233 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 METTL14Q9HCE5 456 aaKnown RBP12.63□□□□□ -0.39
PTPN2-201ENST00000309660 FRMD4BQ9Y2L6 1034 aa12.63□□□□□ -0.39
PTPN2-201ENST00000309660 SIPA1L1O43166 1804 aa12.62□□□□□ -0.39
PTPN2-201ENST00000309660 K7ENM7 598 aa12.62□□□□□ -0.39
PTPN2-201ENST00000309660 RNF40O75150 1001 aa12.62□□□□□ -0.39
PTPN2-201ENST00000309660 CYP3A4P08684 503 aa12.62□□□□□ -0.39
PTPN2-201ENST00000309660 PSMC2P35998 433 aaKnown RBP12.62□□□□□ -0.39
PTPN2-201ENST00000309660 SP4Q02446 784 aa12.62□□□□□ -0.39
PTPN2-201ENST00000309660 NACC1Q96RE7 527 aa12.62□□□□□ -0.39
PTPN2-201ENST00000309660 KRT12Q99456 494 aa12.62□□□□□ -0.39
PTPN2-201ENST00000309660 C10orf71Q711Q0 1435 aa12.62□□□□□ -0.39
PTPN2-201ENST00000309660 PJA2O43164 708 aa12.62□□□□□ -0.39
PTPN2-201ENST00000309660 SORBS3O60504 671 aa12.62□□□□□ -0.39
PTPN2-201ENST00000309660 HOXA7P31268 230 aaPredicted RBP12.62□□□□□ -0.39
PTPN2-201ENST00000309660 GGCXP38435 758 aa12.62□□□□□ -0.39
PTPN2-201ENST00000309660 USP8P40818 1118 aa12.62□□□□□ -0.39
PTPN2-201ENST00000309660 HNRNPH2P55795 449 aaKnown RBP12.62□□□□□ -0.39
PTPN2-201ENST00000309660 NAB2Q15742 525 aa12.62□□□□□ -0.39
PTPN2-201ENST00000309660 SPDYE2Q495Y8 402 aa12.62□□□□□ -0.39
PTPN2-201ENST00000309660 DNAJC21Q5F1R6 531 aaKnown RBP12.62□□□□□ -0.39
PTPN2-201ENST00000309660 NSMFQ6X4W1 530 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms