RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 PCDHA10Q9Y5I2 948 aa23.43■■□□□ 1.34
ATG4D-201ENST00000309469 PFASO15067 1338 aa23.42■■□□□ 1.34
ATG4D-201ENST00000309469 UBE4BO95155 1302 aa23.42■■□□□ 1.34
ATG4D-201ENST00000309469 PTPRFP10586 1907 aa23.42■■□□□ 1.34
ATG4D-201ENST00000309469 IQCA1LA6NCM1 817 aa23.42■■□□□ 1.34
ATG4D-201ENST00000309469 SPATA31C2B4DYI2 1134 aa23.42■■□□□ 1.34
ATG4D-201ENST00000309469 RPL13P26373 211 aaKnown RBP23.42■■□□□ 1.34
ATG4D-201ENST00000309469 GNPTABQ3T906 1256 aa23.42■■□□□ 1.34
ATG4D-201ENST00000309469 WDR59Q6PJI9 974 aa23.42■■□□□ 1.34
ATG4D-201ENST00000309469 MMRN2Q9H8L6 949 aa23.42■■□□□ 1.34
ATG4D-201ENST00000309469 AGTPBP1Q9UPW5 1226 aa23.42■■□□□ 1.34
ATG4D-201ENST00000309469 NFASCO94856 1347 aa23.42■■□□□ 1.34
ATG4D-201ENST00000309469 TGFB1I1O43294 461 aa23.41■■□□□ 1.34
ATG4D-201ENST00000309469 NR3C1P04150 777 aa23.41■■□□□ 1.34
ATG4D-201ENST00000309469 CNTN2Q02246 1040 aa23.41■■□□□ 1.34
ATG4D-201ENST00000309469 MEA1Q16626 185 aa23.41■■□□□ 1.34
ATG4D-201ENST00000309469 FRMD5Q7Z6J6 570 aa23.41■■□□□ 1.34
ATG4D-201ENST00000309469 OPTNQ96CV9 577 aa23.41■■□□□ 1.34
ATG4D-201ENST00000309469 ANKEF1Q9NU02 776 aa23.41■■□□□ 1.34
ATG4D-201ENST00000309469 PCDHB13Q9Y5F0 798 aa23.41■■□□□ 1.34
ATG4D-201ENST00000309469 LOC285556D6RIA3 1793 aa23.41■■□□□ 1.34
ATG4D-201ENST00000309469 HERVK_113P62684 666 aa23.41■■□□□ 1.34
ATG4D-201ENST00000309469 STXBP2Q15833 593 aa23.41■■□□□ 1.34
ATG4D-201ENST00000309469 SMAP1Q8IYB5 467 aaPredicted RBP23.41■■□□□ 1.34
ATG4D-201ENST00000309469 SMCR8Q8TEV9 937 aaPredicted RBP23.41■■□□□ 1.34
ATG4D-201ENST00000309469 CCDC43Q96MW1 224 aaKnown RBP23.41■■□□□ 1.34
ATG4D-201ENST00000309469 FAM207AQ9NSI2 230 aaPredicted RBP23.41■■□□□ 1.34
ATG4D-201ENST00000309469 ZNHIT6Q9NWK9 470 aaKnown RBP23.41■■□□□ 1.34
ATG4D-201ENST00000309469 A0A0G2JMZ2 1700 aa23.4■■□□□ 1.34
ATG4D-201ENST00000309469 EIF3JO75822 258 aaKnown RBP23.4■■□□□ 1.34
ATG4D-201ENST00000309469 KCNMA1Q12791 1236 aa23.4■■□□□ 1.34
ATG4D-201ENST00000309469 MAEAQ7L5Y9 396 aa23.4■■□□□ 1.34
ATG4D-201ENST00000309469 NCAPG2Q86XI2 1143 aa23.4■■□□□ 1.34
ATG4D-201ENST00000309469 CCDC155Q8N6L0 562 aa23.4■■□□□ 1.34
ATG4D-201ENST00000309469 ARMCX3Q9UH62 379 aaPredicted RBP23.4■■□□□ 1.34
ATG4D-201ENST00000309469 ZMYM2Q9UBW7 1377 aa23.4■■□□□ 1.34
ATG4D-201ENST00000309469 PHLPP2Q6ZVD8 1323 aa23.4■■□□□ 1.34
ATG4D-201ENST00000309469 MOGSQ13724 837 aa23.39■■□□□ 1.34
ATG4D-201ENST00000309469 NFIL3Q16649 462 aa23.39■■□□□ 1.34
ATG4D-201ENST00000309469 PNMA8AQ86V59 439 aaPredicted RBP23.39■■□□□ 1.34
ATG4D-201ENST00000309469 PAGR1Q9BTK6 254 aa23.39■■□□□ 1.34
ATG4D-201ENST00000309469 TIPINQ9BVW5 301 aa23.39■■□□□ 1.34
ATG4D-201ENST00000309469 STRA6Q9BX79 667 aa23.39■■□□□ 1.34
ATG4D-201ENST00000309469 JPH1Q9HDC5 661 aaPredicted RBP23.39■■□□□ 1.34
ATG4D-201ENST00000309469 LARSQ9P2J5 1176 aaKnown RBP23.39■■□□□ 1.34
ATG4D-201ENST00000309469 DNAI1Q9UI46 699 aa23.39■■□□□ 1.34
ATG4D-201ENST00000309469 EPN1Q9Y6I3 576 aaPredicted RBP23.39■■□□□ 1.34
ATG4D-201ENST00000309469 TMEM150BA6NC51 233 aa23.39■■□□□ 1.33
ATG4D-201ENST00000309469 BACH1O14867 736 aa23.39■■□□□ 1.33
ATG4D-201ENST00000309469 EPHB6O15197 1021 aa23.39■■□□□ 1.33
ATG4D-201ENST00000309469 CLIC2O15247 247 aa23.39■■□□□ 1.33
ATG4D-201ENST00000309469 SLC16A3O15427 465 aaKnown RBP23.39■■□□□ 1.33
ATG4D-201ENST00000309469 USO1O60763 962 aaKnown RBP23.39■■□□□ 1.33
ATG4D-201ENST00000309469 CNMDO75829 334 aa23.39■■□□□ 1.33
ATG4D-201ENST00000309469 AKAP3O75969 853 aa23.39■■□□□ 1.33
ATG4D-201ENST00000309469 LDLRAD1Q5T700 205 aa23.39■■□□□ 1.33
ATG4D-201ENST00000309469 UTP14CQ5TAP6 766 aaKnown RBP23.39■■□□□ 1.33
ATG4D-201ENST00000309469 FASTKD5Q7L8L6 764 aaKnown RBP23.39■■□□□ 1.33
ATG4D-201ENST00000309469 KSR1Q8IVT5 923 aa23.39■■□□□ 1.33
ATG4D-201ENST00000309469 LOXHD1Q8IVV2 1947 aa23.38■■□□□ 1.33
ATG4D-201ENST00000309469 PSAPP07602 524 aa23.38■■□□□ 1.33
ATG4D-201ENST00000309469 MAPTP10636 758 aaKnown RBP23.38■■□□□ 1.33
ATG4D-201ENST00000309469 ALDH5A1P51649 535 aaPredicted RBP23.38■■□□□ 1.33
ATG4D-201ENST00000309469 XKR9Q5GH70 373 aa23.38■■□□□ 1.33
ATG4D-201ENST00000309469 ACRBPQ8NEB7 543 aa23.38■■□□□ 1.33
ATG4D-201ENST00000309469 NEK11Q8NG66 645 aa23.38■■□□□ 1.33
ATG4D-201ENST00000309469 SH2D3AQ9BRG2 576 aa23.38■■□□□ 1.33
ATG4D-201ENST00000309469 EDEM3Q9BZQ6 932 aa23.38■■□□□ 1.33
ATG4D-201ENST00000309469 METTL14Q9HCE5 456 aaKnown RBP23.38■■□□□ 1.33
ATG4D-201ENST00000309469 GABBR1Q9UBS5 961 aa23.38■■□□□ 1.33
ATG4D-201ENST00000309469 SLC9A2Q9UBY0 812 aa23.38■■□□□ 1.33
ATG4D-201ENST00000309469 POTEB2H3BUK9 544 aa23.37■■□□□ 1.33
ATG4D-201ENST00000309469 GRIN3BO60391 1043 aa23.37■■□□□ 1.33
ATG4D-201ENST00000309469 PPP1R37O75864 691 aa23.37■■□□□ 1.33
ATG4D-201ENST00000309469 NDUFA10O95299 355 aa23.37■■□□□ 1.33
ATG4D-201ENST00000309469 ICAM3P32942 547 aa23.37■■□□□ 1.33
ATG4D-201ENST00000309469 PPP2R3AQ06190 1150 aa23.37■■□□□ 1.33
ATG4D-201ENST00000309469 KCNH2Q12809 1159 aa23.37■■□□□ 1.33
ATG4D-201ENST00000309469 FSTL1Q12841 308 aa23.37■■□□□ 1.33
ATG4D-201ENST00000309469 IKZF4Q9H2S9 585 aa23.37■■□□□ 1.33
ATG4D-201ENST00000309469 DKC1O60832 514 aaKnown RBP eCLIP23.37■■□□□ 1.33
ATG4D-201ENST00000309469 EPB41P11171 864 aaKnown RBP23.37■■□□□ 1.33
ATG4D-201ENST00000309469 PLS3P13797 630 aa23.37■■□□□ 1.33
ATG4D-201ENST00000309469 HNRNPH3P31942 346 aaKnown RBP23.37■■□□□ 1.33
ATG4D-201ENST00000309469 CDK17Q00537 523 aa23.37■■□□□ 1.33
ATG4D-201ENST00000309469 PLA2G4FQ68DD2 849 aa23.37■■□□□ 1.33
ATG4D-201ENST00000309469 ANO5Q75V66 913 aa23.37■■□□□ 1.33
ATG4D-201ENST00000309469 TRMT1LQ7Z2T5 733 aaKnown RBP23.37■■□□□ 1.33
ATG4D-201ENST00000309469 ATP6V0A1Q93050 837 aa23.37■■□□□ 1.33
ATG4D-201ENST00000309469 SLC25A27O95847 323 aa23.36■■□□□ 1.33
ATG4D-201ENST00000309469 OSBPP22059 807 aa23.36■■□□□ 1.33
ATG4D-201ENST00000309469 CASP4P49662 377 aa23.36■■□□□ 1.33
ATG4D-201ENST00000309469 NPEPPSP55786 919 aa23.36■■□□□ 1.33
ATG4D-201ENST00000309469 ACTR2P61160 394 aa23.36■■□□□ 1.33
ATG4D-201ENST00000309469 GNG11P61952 73 aa23.36■■□□□ 1.33
ATG4D-201ENST00000309469 SP2Q02086 613 aa23.36■■□□□ 1.33
ATG4D-201ENST00000309469 SWSAP1Q6NVH7 229 aa23.36■■□□□ 1.33
ATG4D-201ENST00000309469 OTUD6AQ7L8S5 288 aa23.36■■□□□ 1.33
ATG4D-201ENST00000309469 HS2ST1Q7LGA3 356 aa23.36■■□□□ 1.33
ATG4D-201ENST00000309469 DRC1Q96MC2 740 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms