RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 TARBP2Q15633 366 aaKnown RBP19.99■□□□□ 0.79
SSSCA1-201ENST00000309328 ANO5Q75V66 913 aa19.99■□□□□ 0.79
SSSCA1-201ENST00000309328 RPAINQ86UA6 219 aa19.99■□□□□ 0.79
SSSCA1-201ENST00000309328 SLC7A3Q8WY07 619 aa19.99■□□□□ 0.79
SSSCA1-201ENST00000309328 CEP170P1Q96L14 293 aa19.99■□□□□ 0.79
SSSCA1-201ENST00000309328 CYP26B1Q9NR63 512 aa19.99■□□□□ 0.79
SSSCA1-201ENST00000309328 TRMT13Q9NUP7 481 aaKnown RBP19.99■□□□□ 0.79
SSSCA1-201ENST00000309328 TMEM39AQ9NV64 488 aa19.99■□□□□ 0.79
SSSCA1-201ENST00000309328 PCDHA2Q9Y5H9 948 aa19.99■□□□□ 0.79
SSSCA1-201ENST00000309328 STBD1O95210 358 aa19.98■□□□□ 0.79
SSSCA1-201ENST00000309328 PARNO95453 639 aaKnown RBP19.98■□□□□ 0.79
SSSCA1-201ENST00000309328 CDC42EP1Q00587 391 aa19.98■□□□□ 0.79
SSSCA1-201ENST00000309328 RBL2Q08999 1139 aa19.98■□□□□ 0.79
SSSCA1-201ENST00000309328 FAAP100Q0VG06 881 aa19.98■□□□□ 0.79
SSSCA1-201ENST00000309328 NME8Q8N427 588 aa19.98■□□□□ 0.79
SSSCA1-201ENST00000309328 TRPV6Q9H1D0 765 aa19.98■□□□□ 0.79
SSSCA1-201ENST00000309328 TBX21Q9UL17 535 aa19.98■□□□□ 0.79
SSSCA1-201ENST00000309328 KIAA1024Q9UPX6 916 aa19.98■□□□□ 0.79
SSSCA1-201ENST00000309328 SMIM35A0A1B0GVV1 85 aa19.97■□□□□ 0.79
SSSCA1-201ENST00000309328 ZBTB42B2RXF5 422 aa19.97■□□□□ 0.79
SSSCA1-201ENST00000309328 KIAA0355O15063 1070 aa19.97■□□□□ 0.79
SSSCA1-201ENST00000309328 DGAT1O75907 488 aa19.97■□□□□ 0.79
SSSCA1-201ENST00000309328 DNM2P50570 870 aa19.97■□□□□ 0.79
SSSCA1-201ENST00000309328 IGBP1P78318 339 aa19.97■□□□□ 0.79
SSSCA1-201ENST00000309328 MLLT1Q03111 559 aaPredicted RBP19.97■□□□□ 0.79
SSSCA1-201ENST00000309328 XKR9Q5GH70 373 aa19.97■□□□□ 0.79
SSSCA1-201ENST00000309328 ADALQ6DHV7 355 aa19.97■□□□□ 0.79
SSSCA1-201ENST00000309328 POTEGQ6S5H5 508 aa19.97■□□□□ 0.79
SSSCA1-201ENST00000309328 MTHFD1LQ6UB35 978 aa19.97■□□□□ 0.79
SSSCA1-201ENST00000309328 CCDC73Q6ZRK6 1079 aa19.97■□□□□ 0.79
SSSCA1-201ENST00000309328 SYMPKQ92797 1274 aaKnown RBP19.97■□□□□ 0.79
SSSCA1-201ENST00000309328 MMTAG2Q9BU76 263 aaKnown RBP19.97■□□□□ 0.79
SSSCA1-201ENST00000309328 DDX19AQ9NUU7 478 aaKnown RBP19.97■□□□□ 0.79
SSSCA1-201ENST00000309328 FAM13BQ9NYF5 915 aa19.97■□□□□ 0.79
SSSCA1-201ENST00000309328 KCND2Q9NZV8 630 aa19.97■□□□□ 0.79
SSSCA1-201ENST00000309328 WRAP73Q9P2S5 460 aaPredicted RBP19.97■□□□□ 0.79
SSSCA1-201ENST00000309328 PP2D1A8MPX8 630 aa19.96■□□□□ 0.79
SSSCA1-201ENST00000309328 TREHO43280 583 aa19.96■□□□□ 0.79
SSSCA1-201ENST00000309328 MAFO75444 373 aaPredicted RBP19.96■□□□□ 0.79
SSSCA1-201ENST00000309328 C22orf31O95567 290 aa19.96■□□□□ 0.79
SSSCA1-201ENST00000309328 CYP2C9P11712 490 aa19.96■□□□□ 0.79
SSSCA1-201ENST00000309328 KLRC1P26715 233 aa19.96■□□□□ 0.79
SSSCA1-201ENST00000309328 RARRES1P49788 294 aa19.96■□□□□ 0.79
SSSCA1-201ENST00000309328 MTERF2Q49AM1 385 aa19.96■□□□□ 0.79
SSSCA1-201ENST00000309328 TMEM119Q4V9L6 283 aa19.96■□□□□ 0.79
SSSCA1-201ENST00000309328 MARCH8Q5T0T0 291 aa19.96■□□□□ 0.79
SSSCA1-201ENST00000309328 AXDND1Q5T1B0 1012 aaPredicted RBP19.96■□□□□ 0.79
SSSCA1-201ENST00000309328 FAM43BQ6ZT52 329 aaPredicted RBP19.96■□□□□ 0.79
SSSCA1-201ENST00000309328 CLIC6Q96NY7 704 aa19.96■□□□□ 0.79
SSSCA1-201ENST00000309328 MAP7D2Q96T17 732 aa19.96■□□□□ 0.79
SSSCA1-201ENST00000309328 PDLIM7Q9NR12 457 aa19.96■□□□□ 0.79
SSSCA1-201ENST00000309328 STK17AQ9UEE5 414 aa19.96■□□□□ 0.79
SSSCA1-201ENST00000309328 PCDHA7Q9UN72 937 aa19.96■□□□□ 0.79
SSSCA1-201ENST00000309328 ARHGEF35A5YM69 484 aa19.95■□□□□ 0.78
SSSCA1-201ENST00000309328 EYA4O95677 639 aa19.95■□□□□ 0.78
SSSCA1-201ENST00000309328 POLGP54098 1239 aaPredicted RBP19.95■□□□□ 0.78
SSSCA1-201ENST00000309328 TRMT1LQ7Z2T5 733 aaKnown RBP19.95■□□□□ 0.78
SSSCA1-201ENST00000309328 C7orf61Q8IZ16 206 aa19.95■□□□□ 0.78
SSSCA1-201ENST00000309328 MCPH1Q8NEM0 835 aa19.95■□□□□ 0.78
SSSCA1-201ENST00000309328 TCP11Q8WWU5 503 aa19.95■□□□□ 0.78
SSSCA1-201ENST00000309328 TIPINQ9BVW5 301 aa19.95■□□□□ 0.78
SSSCA1-201ENST00000309328 HIPK3Q9H422 1215 aa19.95■□□□□ 0.78
SSSCA1-201ENST00000309328 CUEDC2Q9H467 287 aa19.95■□□□□ 0.78
SSSCA1-201ENST00000309328 DHX33Q9H6R0 707 aaKnown RBP19.95■□□□□ 0.78
SSSCA1-201ENST00000309328 MYH15Q9Y2K3 1946 aa19.94■□□□□ 0.78
SSSCA1-201ENST00000309328 IGKV6-21A0A0C4DH24 114 aa19.94■□□□□ 0.78
SSSCA1-201ENST00000309328 A0A1W2PQ27 194 aa19.94■□□□□ 0.78
SSSCA1-201ENST00000309328 A0A1W2PQ64 194 aa19.94■□□□□ 0.78
SSSCA1-201ENST00000309328 A0A1W2PQD8 194 aa19.94■□□□□ 0.78
SSSCA1-201ENST00000309328 GOLGA6L4A6NEF3 574 aa19.94■□□□□ 0.78
SSSCA1-201ENST00000309328 M0QZ92 97 aa19.94■□□□□ 0.78
SSSCA1-201ENST00000309328 CMA1P23946 247 aa19.94■□□□□ 0.78
SSSCA1-201ENST00000309328 CDC25AP30304 524 aa19.94■□□□□ 0.78
SSSCA1-201ENST00000309328 GRIN1Q05586 938 aa19.94■□□□□ 0.78
SSSCA1-201ENST00000309328 ZRSR1Q15695 479 aaKnown RBP19.94■□□□□ 0.78
SSSCA1-201ENST00000309328 IER5Q5VY09 327 aa19.94■□□□□ 0.78
SSSCA1-201ENST00000309328 PLA2G4FQ68DD2 849 aa19.94■□□□□ 0.78
SSSCA1-201ENST00000309328 PIGOQ8TEQ8 1089 aa19.94■□□□□ 0.78
SSSCA1-201ENST00000309328 EPSTI1Q96J88 318 aa19.94■□□□□ 0.78
SSSCA1-201ENST00000309328 CTAGE1Q96RT6 745 aa19.94■□□□□ 0.78
SSSCA1-201ENST00000309328 NOC4LQ9BVI4 516 aaKnown RBP19.94■□□□□ 0.78
SSSCA1-201ENST00000309328 ATP6V0A4Q9HBG4 840 aa19.94■□□□□ 0.78
SSSCA1-201ENST00000309328 PRDM5Q9NQX1 630 aaPredicted RBP19.94■□□□□ 0.78
SSSCA1-201ENST00000309328 TIMP1P01033 207 aa19.93■□□□□ 0.78
SSSCA1-201ENST00000309328 RAG1P15918 1043 aa19.93■□□□□ 0.78
SSSCA1-201ENST00000309328 RFC2P35250 354 aa19.93■□□□□ 0.78
SSSCA1-201ENST00000309328 GRB10Q13322 594 aa19.93■□□□□ 0.78
SSSCA1-201ENST00000309328 RRAGBQ5VZM2 374 aa19.93■□□□□ 0.78
SSSCA1-201ENST00000309328 RESP18Q5W5W9 173 aa19.93■□□□□ 0.78
SSSCA1-201ENST00000309328 CLEC17AQ6ZS10 378 aa19.93■□□□□ 0.78
SSSCA1-201ENST00000309328 METTL13Q8N6R0 699 aa19.93■□□□□ 0.78
SSSCA1-201ENST00000309328 CEP89Q96ST8 783 aa19.93■□□□□ 0.78
SSSCA1-201ENST00000309328 BHMT2Q9H2M3 363 aa19.93■□□□□ 0.78
SSSCA1-201ENST00000309328 MAGEF1Q9HAY2 307 aa19.93■□□□□ 0.78
SSSCA1-201ENST00000309328 MYH9P35579 1960 aaKnown RBP19.93■□□□□ 0.78
SSSCA1-201ENST00000309328 SELPP16109 830 aa19.92■□□□□ 0.78
SSSCA1-201ENST00000309328 PLCG1P19174 1290 aa19.92■□□□□ 0.78
SSSCA1-201ENST00000309328 NPEPPSP55786 919 aa19.92■□□□□ 0.78
SSSCA1-201ENST00000309328 ZNF200P98182 395 aaPredicted RBP19.92■□□□□ 0.78
SSSCA1-201ENST00000309328 HIC1Q14526 733 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms