RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 SNAPC2Q13487 334 aa9.45□□□□□ -0.9
LCLAT1-201ENST00000309052 EPHA7Q15375 998 aa9.45□□□□□ -0.9
LCLAT1-201ENST00000309052 FAM47CQ5HY64 1035 aa9.45□□□□□ -0.9
LCLAT1-201ENST00000309052 TEX35Q5T0J7 233 aa9.45□□□□□ -0.9
LCLAT1-201ENST00000309052 CCDC60Q8IWA6 550 aaPredicted RBP9.45□□□□□ -0.9
LCLAT1-201ENST00000309052 KMT5AQ9NQR1 393 aa9.45□□□□□ -0.9
LCLAT1-201ENST00000309052 MYO7AQ13402 2215 aa9.45□□□□□ -0.9
LCLAT1-201ENST00000309052 DENND3A2RUS2 1198 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 GYPCP04921 128 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 IRX5P78411 483 aaPredicted RBP9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 PRKCEQ02156 737 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 SPA17Q15506 151 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 HS1BP3Q53T59 392 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 IRF2BP1Q8IU81 584 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 MB21D1Q8N884 522 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 SPATA33Q96N06 139 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 POP1Q99575 1024 aaKnown RBP9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 GBP3Q9H0R5 595 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 AGO4Q9HCK5 861 aaKnown RBP9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 KRT13P13646 458 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 SLC9A1P19634 815 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 HTRA3P83110 453 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 NR1I3Q14994 352 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 CCDC122Q5T0U0 273 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 PNMA8AQ86V59 439 aaPredicted RBP9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 FAM133AQ8N9E0 248 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 JADE2Q9NQC1 790 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 BUB1O43683 1085 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 NR3C1P04150 777 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 TNNI1P19237 187 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 ACOT2P49753 483 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 SMTNP53814 917 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 TAF3Q5VWG9 929 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 E4F1Q66K89 784 aaPredicted RBP9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 CNGA4Q8IV77 575 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 FAM186BQ8IYM0 893 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 TC2NQ8N9U0 490 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 CAGE1Q8TC20 777 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 SLC7A3Q8WY07 619 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 CHORDC1Q9UHD1 332 aaPredicted RBP9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 VAV3Q9UKW4 847 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 PPP2R2CQ9Y2T4 447 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 TNS1Q9HBL0 1735 aaKnown RBP9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 CCDC175P0C221 793 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 ABCB4P21439 1286 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 DNM2P50570 870 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 KCNH2Q12809 1159 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 KNOP1Q1ED39 458 aaKnown RBP9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 HSDL1Q3SXM5 330 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 HAUS6Q7Z4H7 955 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 SYT2Q8N9I0 419 aaPredicted RBP9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 OR8K1Q8NGG5 319 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 CBWD1Q9BRT8 395 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 EPC1Q9H2F5 836 aa9.44□□□□□ -0.9
LCLAT1-201ENST00000309052 EPHB6O15197 1021 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 ABL1P00519 1130 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 ZNF18P17022 549 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 SETQ01105 290 aaPredicted RBP9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 VSIG10LQ86VR7 867 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 THNSL1Q8IYQ7 743 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 GUF1Q8N442 669 aaKnown RBP9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 ZSWIM2Q8NEG5 633 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 DEPTORQ8TB45 409 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 ATP6V0A1Q93050 837 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 IFT74Q96LB3 600 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 APOL6Q9BWW8 343 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 ZNF831Q5JPB2 1677 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 PVALEFA0A1B0GWK0 134 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 PHACTR2O75167 634 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 RPL13P26373 211 aaKnown RBP9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 SP2Q02086 613 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 DMP1Q13316 513 aaPredicted RBP9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 NT5DC1Q5TFE4 455 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 RAD9BQ6WBX8 426 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 PPM1KQ8N3J5 372 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 PPP1R13BQ96KQ4 1090 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 BPIFA3Q9BQP9 254 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 GPBP1L1Q9HC44 474 aaPredicted RBP9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 TBC1D22BQ9NU19 505 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 PGAP2Q9UHJ9 254 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 PITPNM2Q9BZ72 1349 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 TIAM2Q8IVF5 1701 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 DYNC1LI2O43237 492 aaPredicted RBP9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 ZSCAN12O43309 604 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 KCNB1Q14721 858 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 Q4G0T1 1027 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 STXBP4Q6ZWJ1 553 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 RHPN2Q8IUC4 686 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 HSD17B14Q9BPX1 270 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 ADAMTS1Q9UHI8 967 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 KIAA1551Q9HCM1 1747 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 MYH7BA7E2Y1 1941 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 A0A1B0GTH6 734 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 KIF5CO60282 957 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 CYP2C19P33261 490 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 TCF7P36402 384 aaPredicted RBP9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 RARRES1P49788 294 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 SLC12A3P55017 1021 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 PSMC5P62195 406 aa9.43□□□□□ -0.9
LCLAT1-201ENST00000309052 MAP2K1Q02750 393 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms