RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 PACS2Q86VP3 889 aa24.07■■□□□ 1.44
TPM4-201ENST00000300933 LXNQ9BS40 222 aa24.07■■□□□ 1.44
TPM4-201ENST00000300933 IFIH1Q9BYX4 1025 aaKnown RBP24.07■■□□□ 1.44
TPM4-201ENST00000300933 MYO6Q9UM54 1294 aa24.07■■□□□ 1.44
TPM4-201ENST00000300933 SAMM50Q9Y512 469 aa24.07■■□□□ 1.44
TPM4-201ENST00000300933 TLR2O60603 784 aa24.07■■□□□ 1.44
TPM4-201ENST00000300933 PPP2R5CQ13362 524 aa24.07■■□□□ 1.44
TPM4-201ENST00000300933 LRRC31Q6UY01 552 aa24.07■■□□□ 1.44
TPM4-201ENST00000300933 DLK2Q6UY11 383 aa24.07■■□□□ 1.44
TPM4-201ENST00000300933 C1orf186Q6ZWK4 172 aa24.07■■□□□ 1.44
TPM4-201ENST00000300933 EPM2AIP1Q7L775 607 aaPredicted RBP24.07■■□□□ 1.44
TPM4-201ENST00000300933 CCDC170Q8IYT3 715 aa24.07■■□□□ 1.44
TPM4-201ENST00000300933 TAAR1Q96RJ0 339 aa24.07■■□□□ 1.44
TPM4-201ENST00000300933 ZNF185O15231 689 aa24.07■■□□□ 1.44
TPM4-201ENST00000300933 KRT86O43790 486 aa24.07■■□□□ 1.44
TPM4-201ENST00000300933 MYCLP12524 364 aaPredicted RBP24.07■■□□□ 1.44
TPM4-201ENST00000300933 VCAM1P19320 739 aa24.07■■□□□ 1.44
TPM4-201ENST00000300933 TRAF1Q13077 416 aa24.07■■□□□ 1.44
TPM4-201ENST00000300933 PDXDC1Q6P996 788 aa24.07■■□□□ 1.44
TPM4-201ENST00000300933 DNAAF5Q86Y56 855 aa24.07■■□□□ 1.44
TPM4-201ENST00000300933 MXRA8Q9BRK3 442 aa24.07■■□□□ 1.44
TPM4-201ENST00000300933 VPS33BQ9H267 617 aa24.07■■□□□ 1.44
TPM4-201ENST00000300933 PCDHA13Q9Y5I0 950 aa24.07■■□□□ 1.44
TPM4-201ENST00000300933 ASTN1O14525 1302 aa24.06■■□□□ 1.44
TPM4-201ENST00000300933 PSMB7Q99436 277 aa24.06■■□□□ 1.44
TPM4-201ENST00000300933 RPAP3Q9H6T3 665 aaPredicted RBP24.06■■□□□ 1.44
TPM4-201ENST00000300933 IRX3P78415 501 aaPredicted RBP24.06■■□□□ 1.44
TPM4-201ENST00000300933 AMPD2Q01433 879 aa24.06■■□□□ 1.44
TPM4-201ENST00000300933 KIF5AQ12840 1032 aa24.06■■□□□ 1.44
TPM4-201ENST00000300933 NSMFQ6X4W1 530 aa24.06■■□□□ 1.44
TPM4-201ENST00000300933 MYH10P35580 1976 aa24.05■■□□□ 1.44
TPM4-201ENST00000300933 NR3C1P04150 777 aa24.05■■□□□ 1.44
TPM4-201ENST00000300933 MRPS9P82933 396 aaKnown RBP24.05■■□□□ 1.44
TPM4-201ENST00000300933 RAPGEF1Q13905 1077 aa24.05■■□□□ 1.44
TPM4-201ENST00000300933 ARMCX3Q9UH62 379 aaPredicted RBP24.05■■□□□ 1.44
TPM4-201ENST00000300933 RIPK3Q9Y572 518 aa24.05■■□□□ 1.44
TPM4-201ENST00000300933 CAPN6Q9Y6Q1 641 aa24.05■■□□□ 1.44
TPM4-201ENST00000300933 MOCS3O95396 460 aa24.05■■□□□ 1.44
TPM4-201ENST00000300933 GTF2A1P52655 376 aaPredicted RBP24.05■■□□□ 1.44
TPM4-201ENST00000300933 RPS6P62753 249 aaKnown RBP24.05■■□□□ 1.44
TPM4-201ENST00000300933 TTC31Q49AM3 519 aaPredicted RBP24.05■■□□□ 1.44
TPM4-201ENST00000300933 FAM71BQ8TC56 605 aa24.05■■□□□ 1.44
TPM4-201ENST00000300933 TEKT3Q9BXF9 490 aa24.05■■□□□ 1.44
TPM4-201ENST00000300933 SALL4Q9UJQ4 1053 aa24.05■■□□□ 1.44
TPM4-201ENST00000300933 TGFB1I1O43294 461 aa24.04■■□□□ 1.44
TPM4-201ENST00000300933 PLA2G6O60733 806 aa24.04■■□□□ 1.44
TPM4-201ENST00000300933 HNRNPH3P31942 346 aaKnown RBP24.04■■□□□ 1.44
TPM4-201ENST00000300933 MAGEA9P43362 315 aa24.04■■□□□ 1.44
TPM4-201ENST00000300933 HSD17B4P51659 736 aa24.04■■□□□ 1.44
TPM4-201ENST00000300933 ZNF280AP59817 542 aaPredicted RBP24.04■■□□□ 1.44
TPM4-201ENST00000300933 ITGB3BPQ13352 177 aaPredicted RBP24.04■■□□□ 1.44
TPM4-201ENST00000300933 HGSNATQ68CP4 663 aa24.04■■□□□ 1.44
TPM4-201ENST00000300933 FAM133AQ8N9E0 248 aa24.04■■□□□ 1.44
TPM4-201ENST00000300933 GDAP1L1Q96MZ0 367 aa24.04■■□□□ 1.44
TPM4-201ENST00000300933 HINFPQ9BQA5 517 aa24.04■■□□□ 1.44
TPM4-201ENST00000300933 TUFT1Q9NNX1 390 aa24.04■■□□□ 1.44
TPM4-201ENST00000300933 VAV2P52735 878 aa24.04■■□□□ 1.44
TPM4-201ENST00000300933 TNFAIP1Q13829 316 aa24.04■■□□□ 1.44
TPM4-201ENST00000300933 EDRF1Q3B7T1 1238 aa24.04■■□□□ 1.44
TPM4-201ENST00000300933 ATG4CQ96DT6 458 aa24.04■■□□□ 1.44
TPM4-201ENST00000300933 EHMT1Q9H9B1 1298 aa24.04■■□□□ 1.44
TPM4-201ENST00000300933 MYO1AQ9UBC5 1043 aa24.04■■□□□ 1.44
TPM4-201ENST00000300933 TRAF3IP3Q9Y228 551 aa24.04■■□□□ 1.44
TPM4-201ENST00000300933 WDR46O15213 610 aaKnown RBP24.03■■□□□ 1.44
TPM4-201ENST00000300933 RDH13Q8NBN7 331 aa24.03■■□□□ 1.44
TPM4-201ENST00000300933 SYTL5Q8TDW5 730 aaPredicted RBP24.03■■□□□ 1.44
TPM4-201ENST00000300933 SORBS3O60504 671 aa24.03■■□□□ 1.44
TPM4-201ENST00000300933 ODR4Q5SWX8 454 aa24.03■■□□□ 1.44
TPM4-201ENST00000300933 ANGEL2Q5VTE6 544 aaKnown RBP24.03■■□□□ 1.44
TPM4-201ENST00000300933 GJB7Q6PEY0 223 aa24.03■■□□□ 1.44
TPM4-201ENST00000300933 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.03■■□□□ 1.44
TPM4-201ENST00000300933 KIAA1683Q9H0B3 1180 aa24.03■■□□□ 1.44
TPM4-201ENST00000300933 SLC38A10Q9HBR0 1119 aa24.03■■□□□ 1.44
TPM4-201ENST00000300933 CTDP1Q9Y5B0 961 aaPredicted RBP24.03■■□□□ 1.44
TPM4-201ENST00000300933 ZNF541Q9H0D2 1346 aa24.02■■□□□ 1.44
TPM4-201ENST00000300933 BUB1O43683 1085 aa24.02■■□□□ 1.44
TPM4-201ENST00000300933 GNA14O95837 355 aa24.02■■□□□ 1.44
TPM4-201ENST00000300933 WRNIP1Q96S55 665 aa24.02■■□□□ 1.44
TPM4-201ENST00000300933 MMS19Q96T76 1030 aa24.02■■□□□ 1.44
TPM4-201ENST00000300933 PARVGQ9HBI0 331 aa24.02■■□□□ 1.44
TPM4-201ENST00000300933 JADE2Q9NQC1 790 aa24.02■■□□□ 1.44
TPM4-201ENST00000300933 KIF13BQ9NQT8 1826 aa24.02■■□□□ 1.44
TPM4-201ENST00000300933 SLC26A4O43511 780 aa24.02■■□□□ 1.44
TPM4-201ENST00000300933 ATP9AO75110 1047 aa24.02■■□□□ 1.44
TPM4-201ENST00000300933 RNF40O75150 1001 aa24.02■■□□□ 1.44
TPM4-201ENST00000300933 MAGEA1P43355 309 aa24.02■■□□□ 1.44
TPM4-201ENST00000300933 CDK17Q00537 523 aa24.02■■□□□ 1.44
TPM4-201ENST00000300933 SFMBT2Q5VUG0 894 aa24.02■■□□□ 1.44
TPM4-201ENST00000300933 ICE2Q659A1 982 aa24.02■■□□□ 1.44
TPM4-201ENST00000300933 MIER3Q7Z3K6 550 aa24.02■■□□□ 1.44
TPM4-201ENST00000300933 NACC1Q96RE7 527 aa24.02■■□□□ 1.44
TPM4-201ENST00000300933 PDXKO00764 312 aa24.01■■□□□ 1.43
TPM4-201ENST00000300933 CTNND1O60716 968 aaKnown RBP24.01■■□□□ 1.43
TPM4-201ENST00000300933 CYP2J2P51589 502 aa24.01■■□□□ 1.43
TPM4-201ENST00000300933 TKFCQ3LXA3 575 aa24.01■■□□□ 1.43
TPM4-201ENST00000300933 NLGN2Q8NFZ4 835 aa24.01■■□□□ 1.43
TPM4-201ENST00000300933 RIN2Q8WYP3 895 aaPredicted RBP24.01■■□□□ 1.43
TPM4-201ENST00000300933 SECISBP2LQ93073 1101 aaKnown RBP24.01■■□□□ 1.43
TPM4-201ENST00000300933 GBP3Q9H0R5 595 aa24.01■■□□□ 1.43
TPM4-201ENST00000300933 CEP72Q9P209 647 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms