RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 ZNF507Q8TCN5 953 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 MORC4Q8TE76 937 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 EEF2KMTQ96G04 330 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 DRC1Q96MC2 740 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 PTPN18Q99952 460 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 BCAS3Q9H6U6 928 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 UBE4BO95155 1302 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 MANSC4A6NHS7 340 aaPredicted RBP17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 PES1O00541 588 aaKnown RBP17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 CALUO43852 315 aaPredicted RBP17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 USO1O60763 962 aaKnown RBP17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 ATG7O95352 703 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 GNA14O95837 355 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 TPM1P09493 284 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 SKILP12757 684 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 FAM110CQ1W6H9 321 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 LRRC55Q6ZSA7 311 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 EEPD1Q7L9B9 569 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 PPFIBP1Q86W92 1011 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 KIAA1524Q8TCG1 905 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 POLD4Q9HCU8 107 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 ABT1Q9ULW3 272 aaKnown RBP17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 TRAF3IP3Q9Y228 551 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 TLL2Q9Y6L7 1015 aa17.35■□□□□ 0.37
HERPUD1-201ENST00000300302 DOCK5Q9H7D0 1870 aa17.34■□□□□ 0.37
HERPUD1-201ENST00000300302 PDXKO00764 312 aa17.34■□□□□ 0.37
HERPUD1-201ENST00000300302 SORBS3O60504 671 aa17.34■□□□□ 0.37
HERPUD1-201ENST00000300302 YY1P25490 414 aa17.34■□□□□ 0.37
HERPUD1-201ENST00000300302 DNM2P50570 870 aa17.34■□□□□ 0.37
HERPUD1-201ENST00000300302 PTPN21Q16825 1174 aa17.34■□□□□ 0.37
HERPUD1-201ENST00000300302 ANO5Q75V66 913 aa17.34■□□□□ 0.37
HERPUD1-201ENST00000300302 CCDC60Q8IWA6 550 aaPredicted RBP17.34■□□□□ 0.37
HERPUD1-201ENST00000300302 CCDC112Q8NEF3 446 aa17.34■□□□□ 0.37
HERPUD1-201ENST00000300302 NOC4LQ9BVI4 516 aaKnown RBP17.34■□□□□ 0.37
HERPUD1-201ENST00000300302 ZCCHC17Q9NP64 241 aaKnown RBP17.34■□□□□ 0.37
HERPUD1-201ENST00000300302 ZNFX1Q9P2E3 1918 aaKnown RBP17.34■□□□□ 0.37
HERPUD1-201ENST00000300302 PYCARDQ9ULZ3 195 aa17.34■□□□□ 0.37
HERPUD1-201ENST00000300302 PCDHB13Q9Y5F0 798 aa17.34■□□□□ 0.37
HERPUD1-201ENST00000300302 SYNGAP1Q96PV0 1343 aa17.33■□□□□ 0.37
HERPUD1-201ENST00000300302 IGSF9BQ9UPX0 1349 aa17.33■□□□□ 0.37
HERPUD1-201ENST00000300302 FARP2O94887 1054 aaPredicted RBP17.33■□□□□ 0.37
HERPUD1-201ENST00000300302 PRPF6O94906 941 aaKnown RBP17.33■□□□□ 0.37
HERPUD1-201ENST00000300302 MAPTP10636 758 aaKnown RBP17.33■□□□□ 0.37
HERPUD1-201ENST00000300302 ADORA2AP29274 412 aa17.33■□□□□ 0.37
HERPUD1-201ENST00000300302 MAPK7Q13164 816 aa17.33■□□□□ 0.37
HERPUD1-201ENST00000300302 TRIM14Q14142 442 aa17.33■□□□□ 0.37
HERPUD1-201ENST00000300302 PLA2G4FQ68DD2 849 aa17.33■□□□□ 0.37
HERPUD1-201ENST00000300302 METTL7BQ6UX53 244 aa17.33■□□□□ 0.37
HERPUD1-201ENST00000300302 ZNF720Q7Z2F6 126 aa17.33■□□□□ 0.37
HERPUD1-201ENST00000300302 TRMT1LQ7Z2T5 733 aaKnown RBP17.33■□□□□ 0.37
HERPUD1-201ENST00000300302 MLXIPQ9HAP2 919 aa17.33■□□□□ 0.37
HERPUD1-201ENST00000300302 ZNF302Q9NR11 478 aa17.33■□□□□ 0.37
HERPUD1-201ENST00000300302 TYW1Q9NV66 732 aaKnown RBP17.33■□□□□ 0.37
HERPUD1-201ENST00000300302 WDR81Q562E7 1941 aa17.33■□□□□ 0.36
HERPUD1-201ENST00000300302 A0A1W2PQC6 194 aa17.33■□□□□ 0.36
HERPUD1-201ENST00000300302 CETN3O15182 167 aa17.33■□□□□ 0.36
HERPUD1-201ENST00000300302 ZNF862O60290 1169 aa17.33■□□□□ 0.36
HERPUD1-201ENST00000300302 NMT1P30419 496 aaKnown RBP17.33■□□□□ 0.36
HERPUD1-201ENST00000300302 CCZ1BP86790 482 aa17.33■□□□□ 0.36
HERPUD1-201ENST00000300302 CCZ1P86791 482 aaPredicted RBP17.33■□□□□ 0.36
HERPUD1-201ENST00000300302 PRKCEQ02156 737 aa17.33■□□□□ 0.36
HERPUD1-201ENST00000300302 ALCAMQ13740 583 aa17.33■□□□□ 0.36
HERPUD1-201ENST00000300302 XKR3Q5GH77 459 aa17.33■□□□□ 0.36
HERPUD1-201ENST00000300302 MAEAQ7L5Y9 396 aa17.33■□□□□ 0.36
HERPUD1-201ENST00000300302 DAW1Q8N136 415 aa17.33■□□□□ 0.36
HERPUD1-201ENST00000300302 ZNF784Q8NCA9 323 aaPredicted RBP17.33■□□□□ 0.36
HERPUD1-201ENST00000300302 CEP170P1Q96L14 293 aa17.33■□□□□ 0.36
HERPUD1-201ENST00000300302 DDX41Q9UJV9 622 aaKnown RBP17.33■□□□□ 0.36
HERPUD1-201ENST00000300302 MAFBQ9Y5Q3 323 aaPredicted RBP17.33■□□□□ 0.36
HERPUD1-201ENST00000300302 PLXNB2O15031 1838 aa17.33■□□□□ 0.36
HERPUD1-201ENST00000300302 MYH11P35749 1972 aa17.32■□□□□ 0.36
HERPUD1-201ENST00000300302 TMEM150BA6NC51 233 aa17.32■□□□□ 0.36
HERPUD1-201ENST00000300302 TMEM88BA6NKF7 163 aa17.32■□□□□ 0.36
HERPUD1-201ENST00000300302 GGPS1O95749 300 aa17.32■□□□□ 0.36
HERPUD1-201ENST00000300302 PLS3P13797 630 aa17.32■□□□□ 0.36
HERPUD1-201ENST00000300302 RPL13P26373 211 aaKnown RBP17.32■□□□□ 0.36
HERPUD1-201ENST00000300302 MAPK4P31152 587 aa17.32■□□□□ 0.36
HERPUD1-201ENST00000300302 NPEPPSP55786 919 aa17.32■□□□□ 0.36
HERPUD1-201ENST00000300302 ADAM9Q13443 819 aa17.32■□□□□ 0.36
HERPUD1-201ENST00000300302 MAN2A1Q16706 1144 aa17.32■□□□□ 0.36
HERPUD1-201ENST00000300302 ZNF792Q3KQV3 632 aa17.32■□□□□ 0.36
HERPUD1-201ENST00000300302 CCDC40Q4G0X9 1142 aa17.32■□□□□ 0.36
HERPUD1-201ENST00000300302 FKBP15Q5T1M5 1219 aa17.32■□□□□ 0.36
HERPUD1-201ENST00000300302 FAM160B1Q5W0V3 765 aa17.32■□□□□ 0.36
HERPUD1-201ENST00000300302 ZC3H3Q8IXZ2 948 aaKnown RBP17.32■□□□□ 0.36
HERPUD1-201ENST00000300302 SLC17A8Q8NDX2 589 aa17.32■□□□□ 0.36
HERPUD1-201ENST00000300302 SEPT9Q9UHD8 586 aaPredicted RBP17.32■□□□□ 0.36
HERPUD1-201ENST00000300302 AKR1B15C9JRZ8 316 aaPredicted RBP17.31■□□□□ 0.36
HERPUD1-201ENST00000300302 DGAT1O75907 488 aa17.31■□□□□ 0.36
HERPUD1-201ENST00000300302 STBD1O95210 358 aa17.31■□□□□ 0.36
HERPUD1-201ENST00000300302 SLC10A3P09131 477 aa17.31■□□□□ 0.36
HERPUD1-201ENST00000300302 NR2F2P24468 414 aa17.31■□□□□ 0.36
HERPUD1-201ENST00000300302 HOXD13P35453 343 aa17.31■□□□□ 0.36
HERPUD1-201ENST00000300302 LY6KQ17RY6 165 aa17.31■□□□□ 0.36
HERPUD1-201ENST00000300302 VWA3BQ502W6 1294 aa17.31■□□□□ 0.36
HERPUD1-201ENST00000300302 ARMCX2Q7L311 632 aa17.31■□□□□ 0.36
HERPUD1-201ENST00000300302 GPR142Q7Z601 462 aa17.31■□□□□ 0.36
HERPUD1-201ENST00000300302 ZNF467Q7Z7K2 595 aaPredicted RBP17.31■□□□□ 0.36
HERPUD1-201ENST00000300302 SEPT1Q8WYJ6 367 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms