RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 ANAPC7Q9UJX3 599 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 E9PMD0 336 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 H0Y3Z8 333 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 RFX8Q6ZV50 586 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 SLC44A5Q8NCS7 719 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 SLC17A8Q8NDX2 589 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 USP17L15C9J2P7 530 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 USP17L13C9JLJ4 530 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 USP17L11C9JVI0 530 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 USP17L18D6R9N7 530 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 USP17L22D6RA61 530 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 USP17L17D6RBQ6 530 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 USP17L19D6RCP7 530 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 USP17L20D6RJB6 530 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 K7ERI5 159 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 SLC16A4O15374 487 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 CA4P22748 312 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 KCNA1Q09470 495 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 USP17L24Q0WX57 530 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 USP17L6PQ6QN14 398 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 FAM47EQ6ZV65 393 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 NCLNQ969V3 563 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 TRAIPQ9BWF2 469 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 FAM8A1Q9UBU6 413 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 HSPA4LO95757 839 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ESRRAP11474 423 aaPredicted RBP14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ZNF746Q6NUN9 644 aaPredicted RBP14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 SFR1Q86XK3 245 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 FAM213AQ9BRX8 229 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 EPC1Q9H2F5 836 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 WDR17Q8IZU2 1322 aa14.57□□□□□ -0.08
CHRFAM7A-201ENST00000299847 E2F4Q16254 413 aa14.56□□□□□ -0.08
CHRFAM7A-201ENST00000299847 NUGGCQ68CJ6 796 aa14.56□□□□□ -0.08
CHRFAM7A-201ENST00000299847 NEK9Q8TD19 979 aa14.56□□□□□ -0.08
CHRFAM7A-201ENST00000299847 PIGBQ92521 554 aa14.56□□□□□ -0.08
CHRFAM7A-201ENST00000299847 H3BRJ5 948 aa14.56□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ZBED6P86452 979 aa14.56□□□□□ -0.08
CHRFAM7A-201ENST00000299847 TRIM59Q8IWR1 403 aa14.56□□□□□ -0.08
CHRFAM7A-201ENST00000299847 SIRT2Q8IXJ6 389 aa14.56□□□□□ -0.08
CHRFAM7A-201ENST00000299847 KCNV2Q8TDN2 545 aa14.56□□□□□ -0.08
CHRFAM7A-201ENST00000299847 GCC2Q8IWJ2 1684 aa14.56□□□□□ -0.08
CHRFAM7A-201ENST00000299847 GCFC2P16383 781 aaKnown RBP14.56□□□□□ -0.08
CHRFAM7A-201ENST00000299847 SCN4BQ8IWT1 228 aa14.56□□□□□ -0.08
CHRFAM7A-201ENST00000299847 DYDC2Q96IM9 177 aa14.56□□□□□ -0.08
CHRFAM7A-201ENST00000299847 GRAMD1BQ3KR37 738 aa14.56□□□□□ -0.08
CHRFAM7A-201ENST00000299847 SUPT20HL1Q3ZLR7 823 aa14.56□□□□□ -0.08
CHRFAM7A-201ENST00000299847 FRA10AC1Q70Z53 315 aa14.56□□□□□ -0.08
CHRFAM7A-201ENST00000299847 PPP1R36Q96LQ0 422 aa14.56□□□□□ -0.08
CHRFAM7A-201ENST00000299847 PRKAG2Q9UGJ0 569 aa14.56□□□□□ -0.08
CHRFAM7A-201ENST00000299847 PCSK1NQ9UHG2 260 aa14.56□□□□□ -0.08
CHRFAM7A-201ENST00000299847 NPR1P16066 1061 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 GTSE1Q9NYZ3 720 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 USP17L10C9JJH3 530 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 STK25O00506 426 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 MFAP3LO75121 409 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 KRT80Q6KB66 452 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 FBXO38Q6PIJ6 1188 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ZNF710Q8N1W2 664 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 PP2D1A8MPX8 630 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 HIBCHQ6NVY1 386 aaPredicted RBP14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ALKBH5Q6P6C2 394 aaKnown RBP14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 CENPUQ71F23 418 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ENOX1Q8TC92 643 aaKnown RBP14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 FBXO41Q8TF61 875 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 RNF25Q96BH1 459 aaPredicted RBP14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 RCOR1Q9UKL0 485 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 LRRC53A6NM62 1247 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 WDR64B1ANS9 1081 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 RWDD2BP57060 319 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 NME3Q13232 169 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 PDCLQ13371 301 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 MTMR1Q13613 665 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 RESP18Q5W5W9 173 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 CATSPER4Q7RTX7 472 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 TRIM42Q8IWZ5 723 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 GPR108Q9NPR9 543 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ATP8B3O60423 1300 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ESRRBO95718 433 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 TMEM270Q6UE05 265 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 AGR3Q8TD06 166 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 TDRD3Q9H7E2 651 aaKnown RBP14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 SUGT1Q9Y2Z0 365 aa14.55□□□□□ -0.08
CHRFAM7A-201ENST00000299847 TMEM94Q12767 1356 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ZNF233A6NK53 670 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 TMPRSS15P98073 1019 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 KDELC2Q7Z4H8 507 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 SCHIP1Q9P0W5 487 aaPredicted RBP14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 HDAC6Q9UBN7 1215 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 AFF4Q9UHB7 1163 aaKnown RBP14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 SFMBT1Q9UHJ3 866 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 CAPRIN1Q14444 709 aaKnown RBP14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 KLHL8Q9P2G9 620 aaPredicted RBP14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 UGGT1Q9NYU2 1555 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ARAP3Q8WWN8 1544 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 CACNB2Q08289 660 aaPredicted RBP14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 BEND6Q5SZJ8 279 aaPredicted RBP14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ATXN7L3BQ96GX2 97 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 IQANK1A0A1B0GTG1 560 aa14.54□□□□□ -0.08
CHRFAM7A-201ENST00000299847 ESYT3A0FGR9 886 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms