RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 MRPL47Q9HD33 250 aaKnown RBP17.29■□□□□ 0.36
ARHGEF28-201ENST00000296794 CAPN11Q9UMQ6 739 aa17.29■□□□□ 0.36
ARHGEF28-201ENST00000296794 EXOC1LA0A1B0GW35 172 aa17.29■□□□□ 0.36
ARHGEF28-201ENST00000296794 E9PMD0 336 aa17.29■□□□□ 0.36
ARHGEF28-201ENST00000296794 EIF2AK2P19525 551 aaKnown RBP17.29■□□□□ 0.36
ARHGEF28-201ENST00000296794 RCN2Q14257 317 aa17.29■□□□□ 0.36
ARHGEF28-201ENST00000296794 RINT1Q6NUQ1 792 aa17.29■□□□□ 0.36
ARHGEF28-201ENST00000296794 SFR1Q86XK3 245 aa17.29■□□□□ 0.36
ARHGEF28-201ENST00000296794 MAP7D3Q8IWC1 876 aa17.29■□□□□ 0.36
ARHGEF28-201ENST00000296794 ELAC2Q9BQ52 826 aaKnown RBP17.29■□□□□ 0.36
ARHGEF28-201ENST00000296794 IQCA1LA6NCM1 817 aa17.29■□□□□ 0.36
ARHGEF28-201ENST00000296794 MMEP08473 750 aa17.29■□□□□ 0.36
ARHGEF28-201ENST00000296794 RWDD2BP57060 319 aa17.29■□□□□ 0.36
ARHGEF28-201ENST00000296794 TRIM28Q13263 835 aaKnown RBP17.29■□□□□ 0.36
ARHGEF28-201ENST00000296794 APOBEC3FQ8IUX4 373 aaKnown RBP17.29■□□□□ 0.36
ARHGEF28-201ENST00000296794 LRRD1A4D1F6 860 aa17.28■□□□□ 0.36
ARHGEF28-201ENST00000296794 MSH2P43246 934 aa17.28■□□□□ 0.36
ARHGEF28-201ENST00000296794 GRM4Q14833 912 aa17.28■□□□□ 0.36
ARHGEF28-201ENST00000296794 TXLNGQ9NUQ3 528 aa17.28■□□□□ 0.36
ARHGEF28-201ENST00000296794 SEPT10Q9P0V9 454 aa17.28■□□□□ 0.36
ARHGEF28-201ENST00000296794 LIMA1Q9UHB6 759 aaKnown RBP17.28■□□□□ 0.36
ARHGEF28-201ENST00000296794 PXDNLA1KZ92 1463 aa17.28■□□□□ 0.36
ARHGEF28-201ENST00000296794 GOLGA8SH3BPF8 625 aa17.28■□□□□ 0.36
ARHGEF28-201ENST00000296794 ABCD1P33897 745 aa17.28■□□□□ 0.36
ARHGEF28-201ENST00000296794 NUGGCQ68CJ6 796 aa17.28■□□□□ 0.36
ARHGEF28-201ENST00000296794 PDXDC2PQ6P474 469 aa17.28■□□□□ 0.36
ARHGEF28-201ENST00000296794 SP8Q8IXZ3 490 aa17.28■□□□□ 0.36
ARHGEF28-201ENST00000296794 FAM81BQ96LP2 452 aa17.28■□□□□ 0.36
ARHGEF28-201ENST00000296794 ARHGEF40Q8TER5 1519 aa17.28■□□□□ 0.36
ARHGEF28-201ENST00000296794 TBC1D1Q86TI0 1168 aaPredicted RBP17.28■□□□□ 0.36
ARHGEF28-201ENST00000296794 GSDMBQ8TAX9 411 aa17.28■□□□□ 0.36
ARHGEF28-201ENST00000296794 BARHL2Q9NY43 387 aa17.28■□□□□ 0.36
ARHGEF28-201ENST00000296794 C1orf167Q5SNV9 1468 aa17.28■□□□□ 0.36
ARHGEF28-201ENST00000296794 SNAP25P60880 206 aa17.28■□□□□ 0.36
ARHGEF28-201ENST00000296794 DYNLT1P63172 113 aa17.28■□□□□ 0.36
ARHGEF28-201ENST00000296794 TMEM260Q9NX78 707 aa17.28■□□□□ 0.36
ARHGEF28-201ENST00000296794 DIS3Q9Y2L1 958 aaKnown RBP17.28■□□□□ 0.36
ARHGEF28-201ENST00000296794 FAM205CA6NFA0 338 aa17.27■□□□□ 0.36
ARHGEF28-201ENST00000296794 NR3C1P04150 777 aa17.27■□□□□ 0.36
ARHGEF28-201ENST00000296794 MXD3Q9BW11 206 aa17.27■□□□□ 0.36
ARHGEF28-201ENST00000296794 PODXLO00592 558 aa17.27■□□□□ 0.36
ARHGEF28-201ENST00000296794 SART1O43290 800 aaKnown RBP17.27■□□□□ 0.36
ARHGEF28-201ENST00000296794 FDPSP14324 419 aaKnown RBP17.27■□□□□ 0.36
ARHGEF28-201ENST00000296794 RNF207Q6ZRF8 634 aa17.27■□□□□ 0.36
ARHGEF28-201ENST00000296794 PIGOQ8TEQ8 1089 aa17.27■□□□□ 0.36
ARHGEF28-201ENST00000296794 CHP1Q99653 195 aa17.27■□□□□ 0.36
ARHGEF28-201ENST00000296794 GOLGA8IPA6NC78 632 aa17.27■□□□□ 0.36
ARHGEF28-201ENST00000296794 GOLGA8JA6NMD2 632 aa17.27■□□□□ 0.36
ARHGEF28-201ENST00000296794 FCER1AP12319 257 aa17.27■□□□□ 0.36
ARHGEF28-201ENST00000296794 IFRD2Q12894 506 aaPredicted RBP17.27■□□□□ 0.36
ARHGEF28-201ENST00000296794 DNAJC24Q6P3W2 148 aa17.27■□□□□ 0.36
ARHGEF28-201ENST00000296794 RPAINQ86UA6 219 aa17.27■□□□□ 0.36
ARHGEF28-201ENST00000296794 GUF1Q8N442 669 aaKnown RBP17.27■□□□□ 0.36
ARHGEF28-201ENST00000296794 CDKL2Q92772 493 aa17.27■□□□□ 0.36
ARHGEF28-201ENST00000296794 PNPLA7Q6ZV29 1317 aa17.27■□□□□ 0.35
ARHGEF28-201ENST00000296794 TARSL2A2RTX5 802 aaKnown RBP17.27■□□□□ 0.35
ARHGEF28-201ENST00000296794 KIF3CO14782 793 aa17.27■□□□□ 0.35
ARHGEF28-201ENST00000296794 CTDNEP1O95476 244 aa17.27■□□□□ 0.35
ARHGEF28-201ENST00000296794 PSAPP07602 524 aa17.27■□□□□ 0.35
ARHGEF28-201ENST00000296794 MYCP01106 439 aaPredicted RBP17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 SERPINB6P35237 376 aa17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 PDZD4Q76G19 769 aaPredicted RBP17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 CEP120Q8N960 986 aa17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 TC2NQ8N9U0 490 aa17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 DDX47Q9H0S4 455 aaKnown RBP17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 MROH7-TTC4A0A0A0MT08 1334 aa17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 MAGOHP61326 146 aaKnown RBP17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 AP3B2Q13367 1082 aa17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 SPATA4Q8NEY3 305 aa17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 CCHCR1Q8TD31 782 aa17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 IGDCC4Q8TDY8 1250 aa17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 DCAF4Q8WV16 495 aa17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 PACSIN2Q9UNF0 486 aaPredicted RBP17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 MIF4GDA9UHW6 222 aaKnown RBP17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 ZBTB5O15062 677 aa17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 SH3BP5O60239 455 aa17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 PDE1BQ01064 536 aa17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 RASIP1Q5U651 963 aa17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 ICE2Q659A1 982 aa17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 KIAA1841Q6NSI8 718 aa17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 RASGRP2Q7LDG7 609 aa17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 GRID2IPA4D2P6 1211 aa17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 CYP2C19P33261 490 aa17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 FXR1P51114 621 aaKnown RBP eCLIP17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 KCNB1Q14721 858 aa17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 NR1I3Q14994 352 aa17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 PDCD7Q8N8D1 485 aaKnown RBP17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 MYO3AQ8NEV4 1616 aa17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 SYNGAP1Q96PV0 1343 aa17.26■□□□□ 0.35
ARHGEF28-201ENST00000296794 POTEB3A0JP26 581 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 POTECB2RU33 542 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 MT-ND3P03897 115 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 ANTXR2P58335 489 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 BASP1P80723 227 aaKnown RBP17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 ARHGAP4P98171 946 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 MTERF2Q49AM1 385 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 SH2D4BQ5SQS7 431 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 POTEBQ6S5H4 581 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 NME8Q8N427 588 aa17.25■□□□□ 0.35
ARHGEF28-201ENST00000296794 ARHGEF37A1IGU5 675 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms