RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 PWP2Q15269 919 aaKnown RBP25.25■■□□□ 1.63
PTX3-201ENST00000295927 BMT2Q1RMZ1 405 aa25.25■■□□□ 1.63
PTX3-201ENST00000295927 MAEAQ7L5Y9 396 aa25.25■■□□□ 1.63
PTX3-201ENST00000295927 ZNF507Q8TCN5 953 aa25.25■■□□□ 1.63
PTX3-201ENST00000295927 TUBGCP2Q9BSJ2 902 aa25.25■■□□□ 1.63
PTX3-201ENST00000295927 FARP2O94887 1054 aaPredicted RBP25.25■■□□□ 1.63
PTX3-201ENST00000295927 ADORA2AP29274 412 aa25.25■■□□□ 1.63
PTX3-201ENST00000295927 NMT1P30419 496 aaKnown RBP25.25■■□□□ 1.63
PTX3-201ENST00000295927 KNOP1Q1ED39 458 aaKnown RBP25.25■■□□□ 1.63
PTX3-201ENST00000295927 FIZ1Q96SL8 496 aa25.25■■□□□ 1.63
PTX3-201ENST00000295927 MTIF2P46199 727 aaKnown RBP25.24■■□□□ 1.63
PTX3-201ENST00000295927 FKBP3Q00688 224 aaKnown RBP25.24■■□□□ 1.63
PTX3-201ENST00000295927 LY6KQ17RY6 165 aa25.24■■□□□ 1.63
PTX3-201ENST00000295927 FAM110CQ1W6H9 321 aa25.24■■□□□ 1.63
PTX3-201ENST00000295927 ZNF792Q3KQV3 632 aa25.24■■□□□ 1.63
PTX3-201ENST00000295927 ODR4Q5SWX8 454 aa25.24■■□□□ 1.63
PTX3-201ENST00000295927 RGMBQ6NW40 437 aa25.24■■□□□ 1.63
PTX3-201ENST00000295927 OTUD6AQ7L8S5 288 aa25.24■■□□□ 1.63
PTX3-201ENST00000295927 PASKQ96RG2 1323 aa25.24■■□□□ 1.63
PTX3-201ENST00000295927 ASB14A6NK59 587 aa25.24■■□□□ 1.63
PTX3-201ENST00000295927 LGALS16A8MUM7 142 aa25.24■■□□□ 1.63
PTX3-201ENST00000295927 STRNO43815 780 aa25.24■■□□□ 1.63
PTX3-201ENST00000295927 ZNF500O60304 480 aaPredicted RBP25.24■■□□□ 1.63
PTX3-201ENST00000295927 PRKCSHP14314 528 aaPredicted RBP25.24■■□□□ 1.63
PTX3-201ENST00000295927 SFPQP23246 707 aaKnown RBP eCLIP25.24■■□□□ 1.63
PTX3-201ENST00000295927 PPP4R3CPQ6ZMV5 832 aa25.24■■□□□ 1.63
PTX3-201ENST00000295927 FAM178BQ8IXR5 827 aa25.24■■□□□ 1.63
PTX3-201ENST00000295927 ABRAQ8N0Z2 381 aa25.24■■□□□ 1.63
PTX3-201ENST00000295927 DDX41Q9UJV9 622 aaKnown RBP25.24■■□□□ 1.63
PTX3-201ENST00000295927 IVNS1ABPQ9Y6Y0 642 aa25.24■■□□□ 1.63
PTX3-201ENST00000295927 IGSF9BQ9UPX0 1349 aa25.23■■□□□ 1.63
PTX3-201ENST00000295927 MANSC4A6NHS7 340 aaPredicted RBP25.23■■□□□ 1.63
PTX3-201ENST00000295927 EIF3DO15371 548 aaKnown RBP eCLIP25.23■■□□□ 1.63
PTX3-201ENST00000295927 ARIH2O95376 493 aa25.23■■□□□ 1.63
PTX3-201ENST00000295927 GGPS1O95749 300 aa25.23■■□□□ 1.63
PTX3-201ENST00000295927 CCZ1BP86790 482 aa25.23■■□□□ 1.63
PTX3-201ENST00000295927 CCZ1P86791 482 aaPredicted RBP25.23■■□□□ 1.63
PTX3-201ENST00000295927 PRKCEQ02156 737 aa25.23■■□□□ 1.63
PTX3-201ENST00000295927 KCNV1Q6PIU1 500 aa25.23■■□□□ 1.63
PTX3-201ENST00000295927 FBXO16Q8IX29 292 aaPredicted RBP25.23■■□□□ 1.63
PTX3-201ENST00000295927 TIPINQ9BVW5 301 aa25.23■■□□□ 1.63
PTX3-201ENST00000295927 IGF2BP3O00425 579 aaKnown RBP eCLIP25.22■■□□□ 1.63
PTX3-201ENST00000295927 UBXN1Q04323 297 aa25.22■■□□□ 1.63
PTX3-201ENST00000295927 ZNF720Q7Z2F6 126 aa25.22■■□□□ 1.63
PTX3-201ENST00000295927 KIAA1524Q8TCG1 905 aa25.22■■□□□ 1.63
PTX3-201ENST00000295927 TRAF3IP3Q9Y228 551 aa25.22■■□□□ 1.63
PTX3-201ENST00000295927 GSTTP1A0A1W2PQM5 241 aa25.22■■□□□ 1.63
PTX3-201ENST00000295927 NKRFO15226 690 aaKnown RBP eCLIP25.22■■□□□ 1.63
PTX3-201ENST00000295927 EDRF1Q3B7T1 1238 aa25.22■■□□□ 1.63
PTX3-201ENST00000295927 ZC2HC1CQ53FD0 456 aaPredicted RBP25.22■■□□□ 1.63
PTX3-201ENST00000295927 METTL7BQ6UX53 244 aa25.22■■□□□ 1.63
PTX3-201ENST00000295927 GPR142Q7Z601 462 aa25.22■■□□□ 1.63
PTX3-201ENST00000295927 CEP170P1Q96L14 293 aa25.22■■□□□ 1.63
PTX3-201ENST00000295927 CEP63Q96MT8 703 aa25.22■■□□□ 1.63
PTX3-201ENST00000295927 ZNF302Q9NR11 478 aa25.22■■□□□ 1.63
PTX3-201ENST00000295927 MAFBQ9Y5Q3 323 aaPredicted RBP25.22■■□□□ 1.63
PTX3-201ENST00000295927 IGKV6D-21A0A0A0MT36 114 aa25.21■■□□□ 1.63
PTX3-201ENST00000295927 PES1O00541 588 aaKnown RBP25.21■■□□□ 1.63
PTX3-201ENST00000295927 PDXKO00764 312 aa25.21■■□□□ 1.63
PTX3-201ENST00000295927 TPM2P07951 284 aa25.21■■□□□ 1.63
PTX3-201ENST00000295927 GOLGA8FQ08AF8 430 aa25.21■■□□□ 1.63
PTX3-201ENST00000295927 KCNA1Q09470 495 aa25.21■■□□□ 1.63
PTX3-201ENST00000295927 GOLGA8DPQ0D2H9 430 aa25.21■■□□□ 1.63
PTX3-201ENST00000295927 ZC3H3Q8IXZ2 948 aaKnown RBP25.21■■□□□ 1.63
PTX3-201ENST00000295927 NOC4LQ9BVI4 516 aaKnown RBP25.21■■□□□ 1.63
PTX3-201ENST00000295927 MLXIPQ9HAP2 919 aa25.21■■□□□ 1.63
PTX3-201ENST00000295927 SEPT9Q9UHD8 586 aaPredicted RBP25.21■■□□□ 1.63
PTX3-201ENST00000295927 ITIH6Q6UXX5 1313 aa25.21■■□□□ 1.63
PTX3-201ENST00000295927 SKILP12757 684 aa25.2■■□□□ 1.62
PTX3-201ENST00000295927 XKR3Q5GH77 459 aa25.2■■□□□ 1.62
PTX3-201ENST00000295927 MIIPQ5JXC2 388 aa25.2■■□□□ 1.62
PTX3-201ENST00000295927 ARMCX2Q7L311 632 aa25.2■■□□□ 1.62
PTX3-201ENST00000295927 LARSQ9P2J5 1176 aaKnown RBP25.2■■□□□ 1.62
PTX3-201ENST00000295927 CCDC62Q6P9F0 684 aa25.2■■□□□ 1.62
PTX3-201ENST00000295927 STXBP4Q6ZWJ1 553 aa25.2■■□□□ 1.62
PTX3-201ENST00000295927 C17orf53Q8N3J3 647 aaPredicted RBP25.2■■□□□ 1.62
PTX3-201ENST00000295927 DRC1Q96MC2 740 aa25.2■■□□□ 1.62
PTX3-201ENST00000295927 GPRC5CQ9NQ84 441 aa25.2■■□□□ 1.62
PTX3-201ENST00000295927 TYW1Q9NV66 732 aaKnown RBP25.2■■□□□ 1.62
PTX3-201ENST00000295927 CPA4Q9UI42 421 aa25.2■■□□□ 1.62
PTX3-201ENST00000295927 CALUO43852 315 aaPredicted RBP25.19■■□□□ 1.62
PTX3-201ENST00000295927 SLC10A3P09131 477 aa25.19■■□□□ 1.62
PTX3-201ENST00000295927 PLS3P13797 630 aa25.19■■□□□ 1.62
PTX3-201ENST00000295927 ATP4AP20648 1035 aa25.19■■□□□ 1.62
PTX3-201ENST00000295927 DNM2P50570 870 aa25.19■■□□□ 1.62
PTX3-201ENST00000295927 ADAM9Q13443 819 aa25.19■■□□□ 1.62
PTX3-201ENST00000295927 CEP135Q66GS9 1140 aa25.19■■□□□ 1.62
PTX3-201ENST00000295927 ZCCHC17Q9NP64 241 aaKnown RBP25.19■■□□□ 1.62
PTX3-201ENST00000295927 PCDHB13Q9Y5F0 798 aa25.19■■□□□ 1.62
PTX3-201ENST00000295927 UBE4BO95155 1302 aa25.19■■□□□ 1.62
PTX3-201ENST00000295927 ADGRA2Q96PE1 1338 aa25.19■■□□□ 1.62
PTX3-201ENST00000295927 ZMYM2Q9UBW7 1377 aa25.19■■□□□ 1.62
PTX3-201ENST00000295927 MAPK4P31152 587 aa25.18■■□□□ 1.62
PTX3-201ENST00000295927 CLCN1P35523 988 aa25.18■■□□□ 1.62
PTX3-201ENST00000295927 GRB14Q14449 540 aa25.18■■□□□ 1.62
PTX3-201ENST00000295927 CELF3Q5SZQ8 465 aaKnown RBP25.18■■□□□ 1.62
PTX3-201ENST00000295927 FAM102BQ5T8I3 360 aa25.18■■□□□ 1.62
PTX3-201ENST00000295927 PLEKHH3Q7Z736 793 aa25.18■■□□□ 1.62
PTX3-201ENST00000295927 SEPT1Q8WYJ6 367 aa25.18■■□□□ 1.62
PTX3-201ENST00000295927 PCYT2Q99447 389 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms