RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 TRIM54Q9BYV2 358 aa13.31□□□□□ -0.28
SLX4-201ENST00000294008 MRPS15P82914 257 aaKnown RBP13.3□□□□□ -0.28
SLX4-201ENST00000294008 CAPS2Q9BXY5 557 aa13.3□□□□□ -0.28
SLX4-201ENST00000294008 ZNF229Q9UJW7 825 aa13.3□□□□□ -0.28
SLX4-201ENST00000294008 IBTKQ9P2D0 1353 aaPredicted RBP13.3□□□□□ -0.28
SLX4-201ENST00000294008 hCG_2014768A0A024R1R8 64 aa13.3□□□□□ -0.28
SLX4-201ENST00000294008 RASSF10A6NK89 507 aa13.3□□□□□ -0.28
SLX4-201ENST00000294008 GADD45BO75293 160 aaPredicted RBP13.3□□□□□ -0.28
SLX4-201ENST00000294008 ATP6V1C1P21283 382 aa13.3□□□□□ -0.28
SLX4-201ENST00000294008 KIAA2013Q8IYS2 634 aa13.3□□□□□ -0.28
SLX4-201ENST00000294008 HS6ST3Q8IZP7 471 aa13.3□□□□□ -0.28
SLX4-201ENST00000294008 ACCSQ96QU6 501 aa13.3□□□□□ -0.28
SLX4-201ENST00000294008 SCUBE2Q9NQ36 999 aa13.3□□□□□ -0.28
SLX4-201ENST00000294008 ARHGAP26Q9UNA1 814 aa13.3□□□□□ -0.28
SLX4-201ENST00000294008 HFM1A2PYH4 1435 aa13.3□□□□□ -0.28
SLX4-201ENST00000294008 GNAT1P11488 350 aa13.3□□□□□ -0.28
SLX4-201ENST00000294008 HDLBPQ00341 1268 aaKnown RBP13.3□□□□□ -0.28
SLX4-201ENST00000294008 RGS9BPQ6ZS82 235 aa13.3□□□□□ -0.28
SLX4-201ENST00000294008 TRIM58Q8NG06 486 aa13.3□□□□□ -0.28
SLX4-201ENST00000294008 TTLL11Q8NHH1 800 aa13.3□□□□□ -0.28
SLX4-201ENST00000294008 RNASE11Q8TAA1 199 aaKnown RBP13.3□□□□□ -0.28
SLX4-201ENST00000294008 MRFAP1L1Q96HT8 127 aa13.3□□□□□ -0.28
SLX4-201ENST00000294008 MSTO1Q9BUK6 570 aa13.3□□□□□ -0.28
SLX4-201ENST00000294008 MYO1GB0I1T2 1018 aa13.3□□□□□ -0.28
SLX4-201ENST00000294008 CYBBP04839 570 aa13.3□□□□□ -0.28
SLX4-201ENST00000294008 ALDH18A1P54886 795 aaKnown RBP13.3□□□□□ -0.28
SLX4-201ENST00000294008 ANKS6Q68DC2 871 aa13.3□□□□□ -0.28
SLX4-201ENST00000294008 TTC8Q8TAM2 541 aa13.3□□□□□ -0.28
SLX4-201ENST00000294008 ERAP2Q6P179 960 aa13.3□□□□□ -0.28
SLX4-201ENST00000294008 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.3□□□□□ -0.28
SLX4-201ENST00000294008 PNMA8BQ9ULN7 279 aaPredicted RBP13.3□□□□□ -0.28
SLX4-201ENST00000294008 GFPT2O94808 682 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 SERPINB2P05120 415 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 ALDH6A1Q02252 535 aaKnown RBP13.29□□□□□ -0.28
SLX4-201ENST00000294008 MED21Q13503 144 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 BTBD8Q5XKL5 378 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 NEK8Q86SG6 692 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 TESK2Q96S53 571 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 RAD51Q06609 339 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 BTN2A1Q7KYR7 527 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 CNKSR1Q969H4 720 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 FHDC1Q9C0D6 1143 aaPredicted RBP13.29□□□□□ -0.28
SLX4-201ENST00000294008 ZNF197O14709 1029 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 OR52Z1P0C646 297 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 RXRBP28702 533 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 ATXN3P54252 364 aaPredicted RBP13.29□□□□□ -0.28
SLX4-201ENST00000294008 KIZQ2M2Z5 673 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 POMGNT2Q8NAT1 580 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 ZSCAN10Q96SZ4 725 aaPredicted RBP13.29□□□□□ -0.28
SLX4-201ENST00000294008 CCT7Q99832 543 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 PCDHGA4Q9Y5G9 962 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 SOS2Q07890 1332 aaPredicted RBP13.29□□□□□ -0.28
SLX4-201ENST00000294008 GOLGA8KD6RF30 607 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 KLHL18O94889 574 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 H2AFZP0C0S5 128 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 GFAPP14136 432 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 ADORA2BP29275 332 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 GRIK1P39086 918 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 AP1ARQ63HQ0 302 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 H2AFVQ71UI9 128 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 OOSP2Q86WS3 158 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 OR6P1Q8NGX9 317 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 DPF3Q92784 378 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 PLEKHA8Q96JA3 519 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 KCNH4Q9UQ05 1017 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 ATP11BQ9Y2G3 1177 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 RNF103-CHMP3A0A140T963 221 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 LUC7L3O95232 432 aaKnown RBP13.29□□□□□ -0.28
SLX4-201ENST00000294008 MAPK9P45984 424 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 PCYT1AP49585 367 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 SHROOM1Q2M3G4 852 aaPredicted RBP13.29□□□□□ -0.28
SLX4-201ENST00000294008 COMMD2Q86X83 199 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 KRT78Q8N1N4 520 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 INPP5DQ92835 1189 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 BHMTQ93088 406 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 ESRRAP11474 423 aaPredicted RBP13.29□□□□□ -0.28
SLX4-201ENST00000294008 IFT88Q13099 833 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 ERLEC1Q96DZ1 483 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 DEPDC7Q96QD5 511 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 MRFAP1Q9Y605 127 aa13.29□□□□□ -0.28
SLX4-201ENST00000294008 ZNF827Q17R98 1081 aa13.28□□□□□ -0.28
SLX4-201ENST00000294008 DALRD3Q5D0E6 543 aaKnown RBP13.28□□□□□ -0.28
SLX4-201ENST00000294008 PYGBP11216 843 aa13.28□□□□□ -0.28
SLX4-201ENST00000294008 CXCR5P32302 372 aa13.28□□□□□ -0.28
SLX4-201ENST00000294008 PRAMEP78395 509 aa13.28□□□□□ -0.28
SLX4-201ENST00000294008 PLBD2Q8NHP8 589 aa13.28□□□□□ -0.28
SLX4-201ENST00000294008 CCHCR1Q8TD31 782 aa13.28□□□□□ -0.28
SLX4-201ENST00000294008 ATP6V0A4Q9HBG4 840 aa13.28□□□□□ -0.28
SLX4-201ENST00000294008 PIK3R2O00459 728 aa13.28□□□□□ -0.28
SLX4-201ENST00000294008 EIF2AK2P19525 551 aaKnown RBP13.28□□□□□ -0.28
SLX4-201ENST00000294008 TUBB2AQ13885 445 aa13.28□□□□□ -0.28
SLX4-201ENST00000294008 PNMA1Q8ND90 353 aa13.28□□□□□ -0.28
SLX4-201ENST00000294008 PYROXD1Q8WU10 500 aa13.28□□□□□ -0.28
SLX4-201ENST00000294008 TUBB2BQ9BVA1 445 aa13.28□□□□□ -0.28
SLX4-201ENST00000294008 EXOC1LA0A1B0GW35 172 aa13.28□□□□□ -0.28
SLX4-201ENST00000294008 RPS8P62241 208 aaKnown RBP13.28□□□□□ -0.28
SLX4-201ENST00000294008 MORF4L2Q15014 288 aa13.28□□□□□ -0.28
SLX4-201ENST00000294008 EFTUD2Q15029 972 aaKnown RBP eCLIP13.28□□□□□ -0.28
SLX4-201ENST00000294008 RFX8Q6ZV50 586 aa13.28□□□□□ -0.28
SLX4-201ENST00000294008 GALNT8Q9NY28 637 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms