RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 PDXDC2PQ6P474 469 aa11.07□□□□□ -0.64
CCDC58-201ENST00000291458 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.07□□□□□ -0.64
CCDC58-201ENST00000291458 NIPA1Q7RTP0 329 aa11.07□□□□□ -0.64
CCDC58-201ENST00000291458 CRYGNQ8WXF5 182 aa11.07□□□□□ -0.64
CCDC58-201ENST00000291458 GINS2Q9Y248 185 aa11.07□□□□□ -0.64
CCDC58-201ENST00000291458 PCDHA11Q9Y5I1 949 aa11.07□□□□□ -0.64
CCDC58-201ENST00000291458 CDY2AQ9Y6F7 541 aa11.07□□□□□ -0.64
CCDC58-201ENST00000291458 STK36Q9NRP7 1315 aa11.07□□□□□ -0.64
CCDC58-201ENST00000291458 EPOPA6NHQ4 379 aa11.06□□□□□ -0.64
CCDC58-201ENST00000291458 PPP1R3GB7ZBB8 358 aa11.06□□□□□ -0.64
CCDC58-201ENST00000291458 MSH4O15457 936 aa11.06□□□□□ -0.64
CCDC58-201ENST00000291458 DHX15O43143 795 aaKnown RBP11.06□□□□□ -0.64
CCDC58-201ENST00000291458 GAS7O60861 476 aa11.06□□□□□ -0.64
CCDC58-201ENST00000291458 PARNO95453 639 aaKnown RBP11.06□□□□□ -0.64
CCDC58-201ENST00000291458 ADAM17P78536 824 aa11.06□□□□□ -0.64
CCDC58-201ENST00000291458 IKBKEQ14164 716 aa11.06□□□□□ -0.64
CCDC58-201ENST00000291458 NONOQ15233 471 aaKnown RBP eCLIP11.06□□□□□ -0.64
CCDC58-201ENST00000291458 NPY5RQ15761 445 aa11.06□□□□□ -0.64
CCDC58-201ENST00000291458 LETM2Q2VYF4 491 aa11.06□□□□□ -0.64
CCDC58-201ENST00000291458 C8orf34Q49A92 452 aa11.06□□□□□ -0.64
CCDC58-201ENST00000291458 MARCH8Q5T0T0 291 aa11.06□□□□□ -0.64
CCDC58-201ENST00000291458 LRCH2Q5VUJ6 765 aa11.06□□□□□ -0.64
CCDC58-201ENST00000291458 MCTP2Q6DN12 878 aa11.06□□□□□ -0.64
CCDC58-201ENST00000291458 PIK3AP1Q6ZUJ8 805 aa11.06□□□□□ -0.64
CCDC58-201ENST00000291458 RSPH3Q86UC2 560 aa11.06□□□□□ -0.64
CCDC58-201ENST00000291458 CCDC83Q8IWF9 413 aa11.06□□□□□ -0.64
CCDC58-201ENST00000291458 USP38Q8NB14 1042 aa11.06□□□□□ -0.64
CCDC58-201ENST00000291458 ARNTL2Q8WYA1 636 aa11.06□□□□□ -0.64
CCDC58-201ENST00000291458 SEPT8Q92599 483 aa11.06□□□□□ -0.64
CCDC58-201ENST00000291458 GTF3C6Q969F1 213 aa11.06□□□□□ -0.64
CCDC58-201ENST00000291458 LENG9Q96B70 501 aa11.06□□□□□ -0.64
CCDC58-201ENST00000291458 TEKT3Q9BXF9 490 aa11.06□□□□□ -0.64
CCDC58-201ENST00000291458 IFIH1Q9BYX4 1025 aaKnown RBP11.06□□□□□ -0.64
CCDC58-201ENST00000291458 GABBR1Q9UBS5 961 aa11.06□□□□□ -0.64
CCDC58-201ENST00000291458 NLRC5Q86WI3 1866 aa11.06□□□□□ -0.64
CCDC58-201ENST00000291458 ABHD14A-ACY1A0A1B0GW23 586 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 KIF28PB7ZC32 967 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 M0QZ92 97 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 SLC37A4O43826 429 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 EDIL3O43854 480 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 CHRNA1P02708 482 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 AMHP03971 560 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 PSAPP07602 524 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 XBP1P17861 261 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 MRPS6P82932 125 aaKnown RBP11.05□□□□□ -0.64
CCDC58-201ENST00000291458 KRT76Q01546 638 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 GUCY1B3Q02153 619 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 ST3GAL1Q11201 340 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 ADGRE1Q14246 886 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 UGCGQ16739 394 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 KRT40Q6A162 431 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 TAF2Q6P1X5 1199 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 ABHD15Q6UXT9 468 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 KRT25Q7Z3Z0 450 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 TEX2Q8IWB9 1127 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 DAGLBQ8NCG7 672 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 ATP8B4Q8TF62 1192 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 GDPD5Q8WTR4 605 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 ZNF668Q96K58 619 aaPredicted RBP11.05□□□□□ -0.64
CCDC58-201ENST00000291458 PHF20Q9BVI0 1012 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 KRTAP3-3Q9BYR6 98 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 KRTAP3-2Q9BYR7 98 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 UNC45AQ9H3U1 944 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 PRDM6Q9NQX0 595 aa11.05□□□□□ -0.64
CCDC58-201ENST00000291458 DDX25Q9UHL0 483 aaKnown RBP11.05□□□□□ -0.64
CCDC58-201ENST00000291458 MBLAC1A4D2B0 266 aaPredicted RBP11.04□□□□□ -0.64
CCDC58-201ENST00000291458 RRN3P2A6NIE6 340 aa11.04□□□□□ -0.64
CCDC58-201ENST00000291458 WDR64B1ANS9 1081 aa11.04□□□□□ -0.64
CCDC58-201ENST00000291458 CAND2O75155 1236 aa11.04□□□□□ -0.64
CCDC58-201ENST00000291458 CSPG5O95196 566 aa11.04□□□□□ -0.64
CCDC58-201ENST00000291458 CD52P31358 61 aa11.04□□□□□ -0.64
CCDC58-201ENST00000291458 CIITAP33076 1130 aa11.04□□□□□ -0.64
CCDC58-201ENST00000291458 PRKCEQ02156 737 aa11.04□□□□□ -0.64
CCDC58-201ENST00000291458 TAP1Q03518 808 aa11.04□□□□□ -0.64
CCDC58-201ENST00000291458 MGAT3Q09327 533 aa11.04□□□□□ -0.64
CCDC58-201ENST00000291458 NR5A1Q13285 461 aa11.04□□□□□ -0.64
CCDC58-201ENST00000291458 LPIN1Q14693 890 aa11.04□□□□□ -0.64
CCDC58-201ENST00000291458 TMEM266Q2M3C6 531 aa11.04□□□□□ -0.64
CCDC58-201ENST00000291458 TSR1Q2NL82 804 aaKnown RBP11.04□□□□□ -0.64
CCDC58-201ENST00000291458 PLEKHG4Q58EX7 1191 aa11.04□□□□□ -0.64
CCDC58-201ENST00000291458 ZNF746Q6NUN9 644 aaPredicted RBP11.04□□□□□ -0.64
CCDC58-201ENST00000291458 MTHFD1LQ6UB35 978 aa11.04□□□□□ -0.64
CCDC58-201ENST00000291458 PLPPR4Q7Z2D5 763 aa11.04□□□□□ -0.64
CCDC58-201ENST00000291458 MIER3Q7Z3K6 550 aa11.04□□□□□ -0.64
CCDC58-201ENST00000291458 METTL13Q8N6R0 699 aa11.04□□□□□ -0.64
CCDC58-201ENST00000291458 NSUN7Q8NE18 718 aaKnown RBP11.04□□□□□ -0.64
CCDC58-201ENST00000291458 C22orf23Q9BZE7 217 aa11.04□□□□□ -0.64
CCDC58-201ENST00000291458 DISC1Q9NRI5 854 aa11.04□□□□□ -0.64
CCDC58-201ENST00000291458 TBC1D22BQ9NU19 505 aa11.04□□□□□ -0.64
CCDC58-201ENST00000291458 TRPV2Q9Y5S1 764 aa11.04□□□□□ -0.64
CCDC58-201ENST00000291458 IGSF9BQ9UPX0 1349 aa11.04□□□□□ -0.64
CCDC58-201ENST00000291458 TMEM150BA6NC51 233 aa11.03□□□□□ -0.64
CCDC58-201ENST00000291458 M0R2N6 131 aa11.03□□□□□ -0.64
CCDC58-201ENST00000291458 MARCH6O60337 910 aa11.03□□□□□ -0.64
CCDC58-201ENST00000291458 HBP1O60381 514 aa11.03□□□□□ -0.64
CCDC58-201ENST00000291458 CCNT1O60563 726 aaKnown RBP11.03□□□□□ -0.64
CCDC58-201ENST00000291458 EIF5BO60841 1220 aaKnown RBP11.03□□□□□ -0.64
CCDC58-201ENST00000291458 ATG7O95352 703 aa11.03□□□□□ -0.64
CCDC58-201ENST00000291458 FDPSP14324 419 aaKnown RBP11.03□□□□□ -0.64
CCDC58-201ENST00000291458 ATP4AP20648 1035 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms