RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 FAM217BQ9NTX9 383 aaPredicted RBP15.92■□□□□ 0.14
TPM1-202ENST00000288398 NLRC5Q86WI3 1866 aa15.91■□□□□ 0.14
TPM1-202ENST00000288398 IGKV6D-21A0A0A0MT36 114 aa15.91■□□□□ 0.14
TPM1-202ENST00000288398 GRM6O15303 877 aa15.91■□□□□ 0.14
TPM1-202ENST00000288398 MMP1P03956 469 aa15.91■□□□□ 0.14
TPM1-202ENST00000288398 RPS6KB1P23443 525 aa15.91■□□□□ 0.14
TPM1-202ENST00000288398 HSPA4P34932 840 aa15.91■□□□□ 0.14
TPM1-202ENST00000288398 TMEM266Q2M3C6 531 aa15.91■□□□□ 0.14
TPM1-202ENST00000288398 NAALADL2Q58DX5 795 aa15.91■□□□□ 0.14
TPM1-202ENST00000288398 BBXQ8WY36 941 aaPredicted RBP15.91■□□□□ 0.14
TPM1-202ENST00000288398 PHKBQ93100 1093 aa15.91■□□□□ 0.14
TPM1-202ENST00000288398 FAM167AQ96KS9 214 aa15.91■□□□□ 0.14
TPM1-202ENST00000288398 MAP7D2Q96T17 732 aa15.91■□□□□ 0.14
TPM1-202ENST00000288398 IGFLR1Q9H665 355 aa15.91■□□□□ 0.14
TPM1-202ENST00000288398 ALG13Q9NP73 1137 aaKnown RBP15.91■□□□□ 0.14
TPM1-202ENST00000288398 AAASQ9NRG9 546 aa15.91■□□□□ 0.14
TPM1-202ENST00000288398 C1orf112Q9NSG2 853 aa15.91■□□□□ 0.14
TPM1-202ENST00000288398 PCDHA10Q9Y5I2 948 aa15.91■□□□□ 0.14
TPM1-202ENST00000288398 SNX14Q9Y5W7 946 aa15.91■□□□□ 0.14
TPM1-202ENST00000288398 MRPL42Q9Y6G3 142 aaKnown RBP15.91■□□□□ 0.14
TPM1-202ENST00000288398 ALADP13716 330 aa15.9■□□□□ 0.14
TPM1-202ENST00000288398 TMOD1P28289 359 aa15.9■□□□□ 0.14
TPM1-202ENST00000288398 SARSP49591 514 aaKnown RBP15.9■□□□□ 0.14
TPM1-202ENST00000288398 CSPP1Q1MSJ5 1256 aa15.9■□□□□ 0.14
TPM1-202ENST00000288398 LINC01599Q8WXQ3 324 aa15.9■□□□□ 0.14
TPM1-202ENST00000288398 P2RX5Q93086 422 aa15.9■□□□□ 0.14
TPM1-202ENST00000288398 SCLT1Q96NL6 688 aa15.9■□□□□ 0.14
TPM1-202ENST00000288398 LRFN3Q9BTN0 628 aa15.9■□□□□ 0.14
TPM1-202ENST00000288398 RNF26Q9BY78 433 aaPredicted RBP15.9■□□□□ 0.14
TPM1-202ENST00000288398 RC3H2Q9HBD1 1191 aaKnown RBP15.9■□□□□ 0.14
TPM1-202ENST00000288398 RAPGEFL1Q9UHV5 662 aa15.9■□□□□ 0.14
TPM1-202ENST00000288398 PCDHB12Q9Y5F1 795 aa15.9■□□□□ 0.14
TPM1-202ENST00000288398 BRWD1Q9NSI6 2320 aa15.89■□□□□ 0.13
TPM1-202ENST00000288398 IGLV3-22A0A075B6J6 115 aa15.89■□□□□ 0.13
TPM1-202ENST00000288398 WDR64B1ANS9 1081 aa15.89■□□□□ 0.13
TPM1-202ENST00000288398 CPLX1O14810 134 aa15.89■□□□□ 0.13
TPM1-202ENST00000288398 MAGEB2O15479 319 aa15.89■□□□□ 0.13
TPM1-202ENST00000288398 NDUFV1P49821 464 aa15.89■□□□□ 0.13
TPM1-202ENST00000288398 NLRP5P59047 1200 aa15.89■□□□□ 0.13
TPM1-202ENST00000288398 CPLX2Q6PUV4 134 aaKnown RBP15.89■□□□□ 0.13
TPM1-202ENST00000288398 KIAA0319LQ8IZA0 1049 aa15.89■□□□□ 0.13
TPM1-202ENST00000288398 MICAL1Q8TDZ2 1067 aa15.89■□□□□ 0.13
TPM1-202ENST00000288398 PPP1R16BQ96T49 567 aa15.89■□□□□ 0.13
TPM1-202ENST00000288398 POP1Q99575 1024 aaKnown RBP15.89■□□□□ 0.13
TPM1-202ENST00000288398 ADAM2Q99965 735 aa15.89■□□□□ 0.13
TPM1-202ENST00000288398 C22orf23Q9BZE7 217 aa15.89■□□□□ 0.13
TPM1-202ENST00000288398 UPF3BQ9BZI7 483 aaKnown RBP15.89■□□□□ 0.13
TPM1-202ENST00000288398 GABBR1Q9UBS5 961 aa15.89■□□□□ 0.13
TPM1-202ENST00000288398 PRKAG3Q9UGI9 489 aa15.89■□□□□ 0.13
TPM1-202ENST00000288398 PLAGL2Q9UPG8 496 aa15.89■□□□□ 0.13
TPM1-202ENST00000288398 AKT3Q9Y243 479 aa15.89■□□□□ 0.13
TPM1-202ENST00000288398 NOC2LQ9Y3T9 749 aaKnown RBP15.89■□□□□ 0.13
TPM1-202ENST00000288398 NID2Q14112 1375 aa15.88■□□□□ 0.13
TPM1-202ENST00000288398 PI4K2BG5E9Z4 385 aa15.88■□□□□ 0.13
TPM1-202ENST00000288398 DHX15O43143 795 aaKnown RBP15.88■□□□□ 0.13
TPM1-202ENST00000288398 GAS7O60861 476 aa15.88■□□□□ 0.13
TPM1-202ENST00000288398 CRYBB1P53674 252 aaPredicted RBP15.88■□□□□ 0.13
TPM1-202ENST00000288398 HYAL1Q12794 435 aa15.88■□□□□ 0.13
TPM1-202ENST00000288398 CLUL1Q15846 466 aa15.88■□□□□ 0.13
TPM1-202ENST00000288398 KIZQ2M2Z5 673 aa15.88■□□□□ 0.13
TPM1-202ENST00000288398 SLC24A5Q71RS6 500 aa15.88■□□□□ 0.13
TPM1-202ENST00000288398 RTN4RL1Q86UN2 441 aaPredicted RBP15.88■□□□□ 0.13
TPM1-202ENST00000288398 ZNF710Q8N1W2 664 aa15.88■□□□□ 0.13
TPM1-202ENST00000288398 RASGRP4Q8TDF6 673 aa15.88■□□□□ 0.13
TPM1-202ENST00000288398 KCNB2Q92953 911 aa15.88■□□□□ 0.13
TPM1-202ENST00000288398 OSMRQ99650 979 aa15.88■□□□□ 0.13
TPM1-202ENST00000288398 ATP6V0A4Q9HBG4 840 aa15.88■□□□□ 0.13
TPM1-202ENST00000288398 ERVK-5Q9HDB9 667 aa15.88■□□□□ 0.13
TPM1-202ENST00000288398 NRBP2Q9NSY0 501 aa15.88■□□□□ 0.13
TPM1-202ENST00000288398 VPS54Q9P1Q0 977 aa15.88■□□□□ 0.13
TPM1-202ENST00000288398 ST3GAL5Q9UNP4 418 aa15.88■□□□□ 0.13
TPM1-202ENST00000288398 MAFBQ9Y5Q3 323 aaPredicted RBP15.88■□□□□ 0.13
TPM1-202ENST00000288398 TTC3P53804 2025 aa15.87■□□□□ 0.13
TPM1-202ENST00000288398 FAM86C2PA6NEL3 165 aa15.87■□□□□ 0.13
TPM1-202ENST00000288398 TBKBP1A7MCY6 615 aa15.87■□□□□ 0.13
TPM1-202ENST00000288398 CHMP2AO43633 222 aa15.87■□□□□ 0.13
TPM1-202ENST00000288398 GPR37L1O60883 481 aa15.87■□□□□ 0.13
TPM1-202ENST00000288398 PPFIA3O75145 1194 aa15.87■□□□□ 0.13
TPM1-202ENST00000288398 C22orf31O95567 290 aa15.87■□□□□ 0.13
TPM1-202ENST00000288398 VTNP04004 478 aa15.87■□□□□ 0.13
TPM1-202ENST00000288398 ZSCAN20P17040 1043 aaPredicted RBP15.87■□□□□ 0.13
TPM1-202ENST00000288398 IFNAR1P17181 557 aa15.87■□□□□ 0.13
TPM1-202ENST00000288398 CCT2P78371 535 aaKnown RBP15.87■□□□□ 0.13
TPM1-202ENST00000288398 SSRP1Q08945 709 aaKnown RBP15.87■□□□□ 0.13
TPM1-202ENST00000288398 PKN1Q16512 942 aa15.87■□□□□ 0.13
TPM1-202ENST00000288398 ABI1Q8IZP0 508 aa15.87■□□□□ 0.13
TPM1-202ENST00000288398 FBXL16Q8N461 479 aa15.87■□□□□ 0.13
TPM1-202ENST00000288398 KLHL23Q8NBE8 558 aa15.87■□□□□ 0.13
TPM1-202ENST00000288398 POF1BQ8WVV4 589 aa15.87■□□□□ 0.13
TPM1-202ENST00000288398 CRYGNQ8WXF5 182 aa15.87■□□□□ 0.13
TPM1-202ENST00000288398 TEKT3Q9BXF9 490 aa15.87■□□□□ 0.13
TPM1-202ENST00000288398 TMX1Q9H3N1 280 aa15.87■□□□□ 0.13
TPM1-202ENST00000288398 CD320Q9NPF0 282 aa15.87■□□□□ 0.13
TPM1-202ENST00000288398 SH3GLB2Q9NR46 395 aa15.87■□□□□ 0.13
TPM1-202ENST00000288398 RGS18Q9NS28 235 aa15.87■□□□□ 0.13
TPM1-202ENST00000288398 CYP46A1Q9Y6A2 500 aa15.87■□□□□ 0.13
TPM1-202ENST00000288398 HOXA2O43364 376 aa15.86■□□□□ 0.13
TPM1-202ENST00000288398 OATP04181 439 aa15.86■□□□□ 0.13
TPM1-202ENST00000288398 ITGB1P05556 798 aa15.86■□□□□ 0.13
TPM1-202ENST00000288398 LINC00271P0C7V0 271 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms