RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 CD320Q9NPF0 282 aa17.27■□□□□ 0.36
PDE6D-201ENST00000287600 KCNJ14Q9UNX9 436 aa17.27■□□□□ 0.36
PDE6D-201ENST00000287600 HCN4Q9Y3Q4 1203 aa17.27■□□□□ 0.36
PDE6D-201ENST00000287600 C19orf67A6NJJ6 358 aa17.26■□□□□ 0.35
PDE6D-201ENST00000287600 ST18O60284 1047 aa17.26■□□□□ 0.35
PDE6D-201ENST00000287600 JAK2O60674 1132 aa17.26■□□□□ 0.35
PDE6D-201ENST00000287600 CSPG5O95196 566 aa17.26■□□□□ 0.35
PDE6D-201ENST00000287600 CD52P31358 61 aa17.26■□□□□ 0.35
PDE6D-201ENST00000287600 PLA2G5P39877 138 aa17.26■□□□□ 0.35
PDE6D-201ENST00000287600 ST3GAL1Q11201 340 aa17.26■□□□□ 0.35
PDE6D-201ENST00000287600 BTG3Q14201 252 aaPredicted RBP17.26■□□□□ 0.35
PDE6D-201ENST00000287600 PUS10Q3MIT2 529 aaKnown RBP17.26■□□□□ 0.35
PDE6D-201ENST00000287600 IER5Q5VY09 327 aa17.26■□□□□ 0.35
PDE6D-201ENST00000287600 GALNT17Q6IS24 598 aa17.26■□□□□ 0.35
PDE6D-201ENST00000287600 CCDC83Q8IWF9 413 aa17.26■□□□□ 0.35
PDE6D-201ENST00000287600 FAM178BQ8IXR5 827 aa17.26■□□□□ 0.35
PDE6D-201ENST00000287600 BLIDQ8IZY5 108 aa17.26■□□□□ 0.35
PDE6D-201ENST00000287600 FAM177A1Q8N128 213 aaPredicted RBP17.26■□□□□ 0.35
PDE6D-201ENST00000287600 GJD3Q8N144 294 aa17.26■□□□□ 0.35
PDE6D-201ENST00000287600 NEK9Q8TD19 979 aa17.26■□□□□ 0.35
PDE6D-201ENST00000287600 TNPO1Q92973 898 aaKnown RBP17.26■□□□□ 0.35
PDE6D-201ENST00000287600 PABPC5Q96DU9 382 aaKnown RBP17.26■□□□□ 0.35
PDE6D-201ENST00000287600 FAM122AQ96E09 287 aa17.26■□□□□ 0.35
PDE6D-201ENST00000287600 PCYT2Q99447 389 aa17.26■□□□□ 0.35
PDE6D-201ENST00000287600 GJB4Q9NTQ9 266 aa17.26■□□□□ 0.35
PDE6D-201ENST00000287600 TRPV2Q9Y5S1 764 aa17.26■□□□□ 0.35
PDE6D-201ENST00000287600 KIAA1671Q9BY89 1806 aa17.26■□□□□ 0.35
PDE6D-201ENST00000287600 LOXHD1Q8IVV2 1947 aa17.25■□□□□ 0.35
PDE6D-201ENST00000287600 NFASCO94856 1347 aa17.25■□□□□ 0.35
PDE6D-201ENST00000287600 FAM86C2PA6NEL3 165 aa17.25■□□□□ 0.35
PDE6D-201ENST00000287600 C5orf67F2Z3F1 127 aa17.25■□□□□ 0.35
PDE6D-201ENST00000287600 ENPP3O14638 875 aa17.25■□□□□ 0.35
PDE6D-201ENST00000287600 RB1P06400 928 aa17.25■□□□□ 0.35
PDE6D-201ENST00000287600 CYP3A4P08684 503 aa17.25■□□□□ 0.35
PDE6D-201ENST00000287600 ARP10275 920 aa17.25■□□□□ 0.35
PDE6D-201ENST00000287600 BMPR1AP36894 532 aa17.25■□□□□ 0.35
PDE6D-201ENST00000287600 ACTR2P61160 394 aa17.25■□□□□ 0.35
PDE6D-201ENST00000287600 TMEM62Q0P6H9 643 aa17.25■□□□□ 0.35
PDE6D-201ENST00000287600 PLCB4Q15147 1175 aa17.25■□□□□ 0.35
PDE6D-201ENST00000287600 DAGLBQ8NCG7 672 aa17.25■□□□□ 0.35
PDE6D-201ENST00000287600 TRAPPC12Q8WVT3 735 aa17.25■□□□□ 0.35
PDE6D-201ENST00000287600 CRYGNQ8WXF5 182 aa17.25■□□□□ 0.35
PDE6D-201ENST00000287600 AGO3Q9H9G7 860 aaKnown RBP17.25■□□□□ 0.35
PDE6D-201ENST00000287600 RC3H2Q9HBD1 1191 aaKnown RBP17.25■□□□□ 0.35
PDE6D-201ENST00000287600 CLDND1Q9NY35 253 aa17.25■□□□□ 0.35
PDE6D-201ENST00000287600 TTC3P53804 2025 aa17.25■□□□□ 0.35
PDE6D-201ENST00000287600 GRXCR2A6NFK2 248 aa17.24■□□□□ 0.35
PDE6D-201ENST00000287600 FAM86B1E9PN63 330 aa17.24■□□□□ 0.35
PDE6D-201ENST00000287600 MEIS1O00470 390 aa17.24■□□□□ 0.35
PDE6D-201ENST00000287600 GRM6O15303 877 aa17.24■□□□□ 0.35
PDE6D-201ENST00000287600 FAM86B2P0C5J1 330 aa17.24■□□□□ 0.35
PDE6D-201ENST00000287600 STAT5BP51692 787 aa17.24■□□□□ 0.35
PDE6D-201ENST00000287600 PLA2G4DQ86XP0 818 aa17.24■□□□□ 0.35
PDE6D-201ENST00000287600 LINC01599Q8WXQ3 324 aa17.24■□□□□ 0.35
PDE6D-201ENST00000287600 PHF20Q9BVI0 1012 aa17.24■□□□□ 0.35
PDE6D-201ENST00000287600 FTHL17Q9BXU8 183 aa17.24■□□□□ 0.35
PDE6D-201ENST00000287600 LMAN2LQ9H0V9 348 aa17.24■□□□□ 0.35
PDE6D-201ENST00000287600 AGO4Q9HCK5 861 aaKnown RBP17.24■□□□□ 0.35
PDE6D-201ENST00000287600 SH2B1Q9NRF2 756 aaPredicted RBP17.24■□□□□ 0.35
PDE6D-201ENST00000287600 FAM50BQ9Y247 325 aa17.24■□□□□ 0.35
PDE6D-201ENST00000287600 PI4K2BG5E9Z4 385 aa17.23■□□□□ 0.35
PDE6D-201ENST00000287600 DDX39AO00148 427 aaKnown RBP17.23■□□□□ 0.35
PDE6D-201ENST00000287600 LINC00271P0C7V0 271 aa17.23■□□□□ 0.35
PDE6D-201ENST00000287600 PAK2Q13177 524 aa17.23■□□□□ 0.35
PDE6D-201ENST00000287600 ITGB3BPQ13352 177 aaPredicted RBP17.23■□□□□ 0.35
PDE6D-201ENST00000287600 NPY5RQ15761 445 aa17.23■□□□□ 0.35
PDE6D-201ENST00000287600 NIPA1Q7RTP0 329 aa17.23■□□□□ 0.35
PDE6D-201ENST00000287600 PLPPR4Q7Z2D5 763 aa17.23■□□□□ 0.35
PDE6D-201ENST00000287600 CLP1Q92989 425 aaKnown RBP17.23■□□□□ 0.35
PDE6D-201ENST00000287600 ZNF689Q96CS4 500 aaPredicted RBP17.23■□□□□ 0.35
PDE6D-201ENST00000287600 LLPHQ9BRT6 129 aaKnown RBP17.23■□□□□ 0.35
PDE6D-201ENST00000287600 C11orf16Q9NQ32 467 aa17.23■□□□□ 0.35
PDE6D-201ENST00000287600 PCDHA2Q9Y5H9 948 aa17.23■□□□□ 0.35
PDE6D-201ENST00000287600 IGSF9BQ9UPX0 1349 aa17.22■□□□□ 0.35
PDE6D-201ENST00000287600 IGLV3-22A0A075B6J6 115 aa17.22■□□□□ 0.35
PDE6D-201ENST00000287600 POTEB3A0JP26 581 aa17.22■□□□□ 0.35
PDE6D-201ENST00000287600 M0R2N6 131 aa17.22■□□□□ 0.35
PDE6D-201ENST00000287600 BACH1O14867 736 aa17.22■□□□□ 0.35
PDE6D-201ENST00000287600 GPR37L1O60883 481 aa17.22■□□□□ 0.35
PDE6D-201ENST00000287600 DGKIO75912 1065 aa17.22■□□□□ 0.35
PDE6D-201ENST00000287600 FOSBP53539 338 aa17.22■□□□□ 0.35
PDE6D-201ENST00000287600 POTEBQ6S5H4 581 aa17.22■□□□□ 0.35
PDE6D-201ENST00000287600 NPAS4Q8IUM7 802 aa17.22■□□□□ 0.35
PDE6D-201ENST00000287600 TBCKQ8TEA7 893 aa17.22■□□□□ 0.35
PDE6D-201ENST00000287600 PADI3Q9ULW8 664 aa17.22■□□□□ 0.35
PDE6D-201ENST00000287600 SQORQ9Y6N5 450 aa17.22■□□□□ 0.35
PDE6D-201ENST00000287600 SMIM35A0A1B0GVV1 85 aa17.21■□□□□ 0.35
PDE6D-201ENST00000287600 NCK2O43639 380 aa17.21■□□□□ 0.35
PDE6D-201ENST00000287600 MMP1P03956 469 aa17.21■□□□□ 0.35
PDE6D-201ENST00000287600 STAG3L1P0CL83 205 aa17.21■□□□□ 0.35
PDE6D-201ENST00000287600 IBSPP21815 317 aaPredicted RBP17.21■□□□□ 0.35
PDE6D-201ENST00000287600 CIITAP33076 1130 aa17.21■□□□□ 0.35
PDE6D-201ENST00000287600 SLC26A2P50443 739 aa17.21■□□□□ 0.35
PDE6D-201ENST00000287600 USP11P51784 963 aa17.21■□□□□ 0.35
PDE6D-201ENST00000287600 TRIM29Q14134 588 aa17.21■□□□□ 0.35
PDE6D-201ENST00000287600 COL19A1Q14993 1142 aa17.21■□□□□ 0.35
PDE6D-201ENST00000287600 NONOQ15233 471 aaKnown RBP eCLIP17.21■□□□□ 0.35
PDE6D-201ENST00000287600 PAN2Q504Q3 1202 aaKnown RBP17.21■□□□□ 0.35
PDE6D-201ENST00000287600 PRR16Q569H4 304 aa17.21■□□□□ 0.35
PDE6D-201ENST00000287600 FAM160B1Q5W0V3 765 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms