RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 BRIP1Q9BX63 1249 aa16.97■□□□□ 0.31
USP43-201ENST00000285199 TRIM4Q9C037 500 aa16.97■□□□□ 0.31
USP43-201ENST00000285199 BARHL2Q9NY43 387 aa16.97■□□□□ 0.31
USP43-201ENST00000285199 MINPP1Q9UNW1 487 aa16.97■□□□□ 0.31
USP43-201ENST00000285199 ZC3H13Q5T200 1668 aaKnown RBP16.97■□□□□ 0.31
USP43-201ENST00000285199 DRAP1Q14919 205 aaPredicted RBP16.96■□□□□ 0.31
USP43-201ENST00000285199 SMAD1Q15797 465 aaKnown RBP16.96■□□□□ 0.31
USP43-201ENST00000285199 RASA4BC9J798 803 aa16.96■□□□□ 0.31
USP43-201ENST00000285199 RASA4O43374 803 aa16.96■□□□□ 0.31
USP43-201ENST00000285199 NKX1-1Q15270 411 aaPredicted RBP16.96■□□□□ 0.31
USP43-201ENST00000285199 PPP2R5EQ16537 467 aa16.96■□□□□ 0.31
USP43-201ENST00000285199 FAM98CQ17RN3 349 aaKnown RBP16.96■□□□□ 0.31
USP43-201ENST00000285199 TTI2Q6NXR4 508 aa16.96■□□□□ 0.31
USP43-201ENST00000285199 ANKS1AQ92625 1134 aa16.96■□□□□ 0.31
USP43-201ENST00000285199 DNAJC7Q99615 494 aa16.96■□□□□ 0.31
USP43-201ENST00000285199 HSD3B7Q9H2F3 369 aa16.96■□□□□ 0.31
USP43-201ENST00000285199 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.96■□□□□ 0.31
USP43-201ENST00000285199 FAM205AQ6ZU69 1335 aa16.96■□□□□ 0.31
USP43-201ENST00000285199 DESP17661 470 aa16.96■□□□□ 0.31
USP43-201ENST00000285199 EIF3BP55884 814 aaKnown RBP16.96■□□□□ 0.31
USP43-201ENST00000285199 CDC37Q16543 378 aaPredicted RBP16.96■□□□□ 0.31
USP43-201ENST00000285199 TMCO4Q5TGY1 634 aa16.96■□□□□ 0.31
USP43-201ENST00000285199 TXNDC16Q9P2K2 825 aa16.96■□□□□ 0.31
USP43-201ENST00000285199 SLC29A2Q14542 456 aa16.96■□□□□ 0.3
USP43-201ENST00000285199 LIN9Q5TKA1 542 aa16.96■□□□□ 0.3
USP43-201ENST00000285199 ZC3H18Q86VM9 953 aaKnown RBP16.96■□□□□ 0.3
USP43-201ENST00000285199 RAPGEF5Q92565 580 aa16.96■□□□□ 0.3
USP43-201ENST00000285199 OSBPL1AQ9BXW6 950 aa16.96■□□□□ 0.3
USP43-201ENST00000285199 MAK16Q9BXY0 300 aaKnown RBP16.96■□□□□ 0.3
USP43-201ENST00000285199 PCP11498 1178 aaKnown RBP16.95■□□□□ 0.3
USP43-201ENST00000285199 ITGA4P13612 1032 aa16.95■□□□□ 0.3
USP43-201ENST00000285199 GALCP54803 685 aa16.95■□□□□ 0.3
USP43-201ENST00000285199 DTX3LQ8TDB6 740 aa16.95■□□□□ 0.3
USP43-201ENST00000285199 CNKSR2Q8WXI2 1034 aa16.95■□□□□ 0.3
USP43-201ENST00000285199 FAM84BQ96KN1 310 aaPredicted RBP16.95■□□□□ 0.3
USP43-201ENST00000285199 XPO6Q96QU8 1125 aaKnown RBP16.95■□□□□ 0.3
USP43-201ENST00000285199 PXDNLA1KZ92 1463 aa16.95■□□□□ 0.3
USP43-201ENST00000285199 NR3C1P04150 777 aa16.95■□□□□ 0.3
USP43-201ENST00000285199 SMTNP53814 917 aa16.95■□□□□ 0.3
USP43-201ENST00000285199 SGSM3Q96HU1 749 aa16.95■□□□□ 0.3
USP43-201ENST00000285199 C9orf72Q96LT7 481 aa16.95■□□□□ 0.3
USP43-201ENST00000285199 CCSER1Q9C0I3 900 aa16.95■□□□□ 0.3
USP43-201ENST00000285199 CCNL1Q9UK58 526 aaPredicted RBP16.95■□□□□ 0.3
USP43-201ENST00000285199 FTLP02792 175 aaPredicted RBP16.95■□□□□ 0.3
USP43-201ENST00000285199 PSMC4P43686 418 aa16.95■□□□□ 0.3
USP43-201ENST00000285199 RAD23BP54727 409 aa16.95■□□□□ 0.3
USP43-201ENST00000285199 PKN1Q16512 942 aa16.95■□□□□ 0.3
USP43-201ENST00000285199 ARHGEF18Q6ZSZ5 1173 aa16.95■□□□□ 0.3
USP43-201ENST00000285199 FBXO11Q86XK2 927 aa16.95■□□□□ 0.3
USP43-201ENST00000285199 USP38Q8NB14 1042 aa16.95■□□□□ 0.3
USP43-201ENST00000285199 WDR17Q8IZU2 1322 aa16.94■□□□□ 0.3
USP43-201ENST00000285199 USP17L10C9JJH3 530 aa16.94■□□□□ 0.3
USP43-201ENST00000285199 RASA3Q14644 834 aa16.94■□□□□ 0.3
USP43-201ENST00000285199 CCDC137Q6PK04 289 aaKnown RBP16.94■□□□□ 0.3
USP43-201ENST00000285199 METTL13Q8N6R0 699 aa16.94■□□□□ 0.3
USP43-201ENST00000285199 TSC22D3Q99576 134 aa16.94■□□□□ 0.3
USP43-201ENST00000285199 CNTNAP5Q8WYK1 1306 aa16.94■□□□□ 0.3
USP43-201ENST00000285199 TTMPQ5BVD1 217 aa16.94■□□□□ 0.3
USP43-201ENST00000285199 PDXDC2PQ6P474 469 aa16.94■□□□□ 0.3
USP43-201ENST00000285199 ADGRA1Q86SQ6 560 aa16.94■□□□□ 0.3
USP43-201ENST00000285199 TGS1Q96RS0 853 aaKnown RBP16.94■□□□□ 0.3
USP43-201ENST00000285199 LARSQ9P2J5 1176 aaKnown RBP16.94■□□□□ 0.3
USP43-201ENST00000285199 G3BP2Q9UN86 482 aaKnown RBP16.94■□□□□ 0.3
USP43-201ENST00000285199 ATMINO43313 823 aaPredicted RBP16.94■□□□□ 0.3
USP43-201ENST00000285199 ADCY2Q08462 1091 aa16.94■□□□□ 0.3
USP43-201ENST00000285199 CREG2Q8IUH2 290 aa16.94■□□□□ 0.3
USP43-201ENST00000285199 LRRC34Q8IZ02 419 aa16.94■□□□□ 0.3
USP43-201ENST00000285199 SGK1O00141 431 aa16.93■□□□□ 0.3
USP43-201ENST00000285199 YWHAGP61981 247 aaKnown RBP eCLIP16.93■□□□□ 0.3
USP43-201ENST00000285199 TRAPPC3LQ5T215 181 aa16.93■□□□□ 0.3
USP43-201ENST00000285199 NAP1L4Q99733 375 aaKnown RBP16.93■□□□□ 0.3
USP43-201ENST00000285199 RGL1Q9NZL6 768 aa16.93■□□□□ 0.3
USP43-201ENST00000285199 SLAIN2Q9P270 581 aa16.93■□□□□ 0.3
USP43-201ENST00000285199 TSPOAP1O95153 1857 aa16.93■□□□□ 0.3
USP43-201ENST00000285199 PVALEFA0A1B0GWK0 134 aa16.93■□□□□ 0.3
USP43-201ENST00000285199 EPHB6O15197 1021 aa16.93■□□□□ 0.3
USP43-201ENST00000285199 UCHL3P15374 230 aa16.93■□□□□ 0.3
USP43-201ENST00000285199 BFSP1Q12934 665 aa16.93■□□□□ 0.3
USP43-201ENST00000285199 PPP2R5CQ13362 524 aa16.93■□□□□ 0.3
USP43-201ENST00000285199 SEMA6BQ9H3T3 888 aa16.93■□□□□ 0.3
USP43-201ENST00000285199 NOD2Q9HC29 1040 aa16.93■□□□□ 0.3
USP43-201ENST00000285199 GOLGA8RI6L899 631 aa16.93■□□□□ 0.3
USP43-201ENST00000285199 FANCGO15287 622 aa16.93■□□□□ 0.3
USP43-201ENST00000285199 PAX7P23759 505 aa16.93■□□□□ 0.3
USP43-201ENST00000285199 SYCP2LQ5T4T6 812 aa16.93■□□□□ 0.3
USP43-201ENST00000285199 PASD1Q8IV76 773 aa16.93■□□□□ 0.3
USP43-201ENST00000285199 ANKRD35Q8N283 1001 aa16.93■□□□□ 0.3
USP43-201ENST00000285199 TLR10Q9BXR5 811 aa16.93■□□□□ 0.3
USP43-201ENST00000285199 KCND1Q9NSA2 647 aa16.93■□□□□ 0.3
USP43-201ENST00000285199 I3L4J1 428 aa16.92■□□□□ 0.3
USP43-201ENST00000285199 CAND2O75155 1236 aa16.92■□□□□ 0.3
USP43-201ENST00000285199 XKR9Q5GH70 373 aa16.92■□□□□ 0.3
USP43-201ENST00000285199 NAIF1Q69YI7 327 aaPredicted RBP16.92■□□□□ 0.3
USP43-201ENST00000285199 MIER3Q7Z3K6 550 aa16.92■□□□□ 0.3
USP43-201ENST00000285199 DYDC2Q96IM9 177 aa16.92■□□□□ 0.3
USP43-201ENST00000285199 REXO2Q9Y3B8 237 aaKnown RBP16.92■□□□□ 0.3
USP43-201ENST00000285199 hCG_2014768A0A024R1R8 64 aa16.92■□□□□ 0.3
USP43-201ENST00000285199 KRT19P08727 400 aa16.92■□□□□ 0.3
USP43-201ENST00000285199 NMT1P30419 496 aaKnown RBP16.92■□□□□ 0.3
USP43-201ENST00000285199 NSFP46459 744 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms