RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 MTERF2Q49AM1 385 aa12.97□□□□□ -0.33
SSRP1-201ENST00000278412 ZNF746Q6NUN9 644 aaPredicted RBP12.97□□□□□ -0.33
SSRP1-201ENST00000278412 XRRA1Q6P2D8 792 aa12.97□□□□□ -0.33
SSRP1-201ENST00000278412 MAMDC4Q6UXC1 1216 aa12.97□□□□□ -0.33
SSRP1-201ENST00000278412 LRRC55Q6ZSA7 311 aa12.97□□□□□ -0.33
SSRP1-201ENST00000278412 CPLX3Q8WVH0 158 aa12.97□□□□□ -0.33
SSRP1-201ENST00000278412 KCTD10Q9H3F6 313 aa12.97□□□□□ -0.33
SSRP1-201ENST00000278412 ESPNB1AK53 854 aa12.96□□□□□ -0.33
SSRP1-201ENST00000278412 TBCAO75347 108 aaKnown RBP12.96□□□□□ -0.33
SSRP1-201ENST00000278412 FAM13AO94988 1023 aa12.96□□□□□ -0.33
SSRP1-201ENST00000278412 SUPT20HL2P0C7V6 817 aa12.96□□□□□ -0.33
SSRP1-201ENST00000278412 TCF7P36402 384 aaPredicted RBP12.96□□□□□ -0.33
SSRP1-201ENST00000278412 APBA1Q02410 837 aa12.96□□□□□ -0.33
SSRP1-201ENST00000278412 FAM110CQ1W6H9 321 aa12.96□□□□□ -0.33
SSRP1-201ENST00000278412 ZCWPW2Q504Y3 356 aa12.96□□□□□ -0.33
SSRP1-201ENST00000278412 ODR4Q5SWX8 454 aa12.96□□□□□ -0.33
SSRP1-201ENST00000278412 TAPT1Q6NXT6 567 aa12.96□□□□□ -0.33
SSRP1-201ENST00000278412 CCDC62Q6P9F0 684 aa12.96□□□□□ -0.33
SSRP1-201ENST00000278412 DPP9Q86TI2 863 aa12.96□□□□□ -0.33
SSRP1-201ENST00000278412 ZMYM2Q9UBW7 1377 aa12.96□□□□□ -0.33
SSRP1-201ENST00000278412 B4DLN1 442 aa12.96□□□□□ -0.34
SSRP1-201ENST00000278412 TXNP10599 105 aaKnown RBP12.96□□□□□ -0.34
SSRP1-201ENST00000278412 ICAM3P32942 547 aa12.96□□□□□ -0.34
SSRP1-201ENST00000278412 CASP4P49662 377 aa12.96□□□□□ -0.34
SSRP1-201ENST00000278412 JAK3P52333 1124 aa12.96□□□□□ -0.34
SSRP1-201ENST00000278412 ADKP55263 362 aaKnown RBP12.96□□□□□ -0.34
SSRP1-201ENST00000278412 NR1I3Q14994 352 aa12.96□□□□□ -0.34
SSRP1-201ENST00000278412 FAM102BQ5T8I3 360 aa12.96□□□□□ -0.34
SSRP1-201ENST00000278412 GUF1Q8N442 669 aaKnown RBP12.96□□□□□ -0.34
SSRP1-201ENST00000278412 CEP170P1Q96L14 293 aa12.96□□□□□ -0.34
SSRP1-201ENST00000278412 CNOT6LQ96LI5 555 aaKnown RBP12.96□□□□□ -0.34
SSRP1-201ENST00000278412 XPNPEP1Q9NQW7 623 aa12.96□□□□□ -0.34
SSRP1-201ENST00000278412 A0A1B0GTH6 734 aa12.95□□□□□ -0.34
SSRP1-201ENST00000278412 UNCXA6NJT0 531 aa12.95□□□□□ -0.34
SSRP1-201ENST00000278412 GJB1P08034 283 aa12.95□□□□□ -0.34
SSRP1-201ENST00000278412 CYP2C19P33261 490 aa12.95□□□□□ -0.34
SSRP1-201ENST00000278412 TPM4P67936 248 aa12.95□□□□□ -0.34
SSRP1-201ENST00000278412 EPM2AIP1Q7L775 607 aaPredicted RBP12.95□□□□□ -0.34
SSRP1-201ENST00000278412 C4orf19Q8IY42 314 aa12.95□□□□□ -0.34
SSRP1-201ENST00000278412 SHCBP1Q8NEM2 672 aa12.95□□□□□ -0.34
SSRP1-201ENST00000278412 TMEM143Q96AN5 459 aa12.95□□□□□ -0.34
SSRP1-201ENST00000278412 DHTKD1Q96HY7 919 aaPredicted RBP12.95□□□□□ -0.34
SSRP1-201ENST00000278412 FAM84AQ96KN4 292 aa12.95□□□□□ -0.34
SSRP1-201ENST00000278412 KATNBL1Q9H079 304 aa12.95□□□□□ -0.34
SSRP1-201ENST00000278412 MLXIPQ9HAP2 919 aa12.95□□□□□ -0.34
SSRP1-201ENST00000278412 IVNS1ABPQ9Y6Y0 642 aa12.95□□□□□ -0.34
SSRP1-201ENST00000278412 ADGRA3Q8IWK6 1321 aa12.95□□□□□ -0.34
SSRP1-201ENST00000278412 TULP1O00294 542 aaPredicted RBP12.95□□□□□ -0.34
SSRP1-201ENST00000278412 CYP2B6P20813 491 aa12.95□□□□□ -0.34
SSRP1-201ENST00000278412 GCLCP48506 637 aaPredicted RBP12.95□□□□□ -0.34
SSRP1-201ENST00000278412 COPB1P53618 953 aaKnown RBP12.95□□□□□ -0.34
SSRP1-201ENST00000278412 STIM1Q13586 685 aa12.95□□□□□ -0.34
SSRP1-201ENST00000278412 GRB14Q14449 540 aa12.95□□□□□ -0.34
SSRP1-201ENST00000278412 VSTM4Q8IW00 320 aa12.95□□□□□ -0.34
SSRP1-201ENST00000278412 CCDC47Q96A33 483 aaKnown RBP12.95□□□□□ -0.34
SSRP1-201ENST00000278412 MAML3Q96JK9 1138 aa12.95□□□□□ -0.34
SSRP1-201ENST00000278412 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.95□□□□□ -0.34
SSRP1-201ENST00000278412 SLC45A1Q9Y2W3 748 aa12.95□□□□□ -0.34
SSRP1-201ENST00000278412 NFASCO94856 1347 aa12.95□□□□□ -0.34
SSRP1-201ENST00000278412 SLC16A4O15374 487 aa12.94□□□□□ -0.34
SSRP1-201ENST00000278412 PSAPP07602 524 aa12.94□□□□□ -0.34
SSRP1-201ENST00000278412 PEX3P56589 373 aa12.94□□□□□ -0.34
SSRP1-201ENST00000278412 CCNA1P78396 465 aa12.94□□□□□ -0.34
SSRP1-201ENST00000278412 PLEKHH3Q7Z736 793 aa12.94□□□□□ -0.34
SSRP1-201ENST00000278412 SPATA33Q96N06 139 aa12.94□□□□□ -0.34
SSRP1-201ENST00000278412 PARVGQ9HBI0 331 aa12.94□□□□□ -0.34
SSRP1-201ENST00000278412 ZNF302Q9NR11 478 aa12.94□□□□□ -0.34
SSRP1-201ENST00000278412 ARID2Q68CP9 1835 aa12.94□□□□□ -0.34
SSRP1-201ENST00000278412 TMEM88BA6NKF7 163 aa12.94□□□□□ -0.34
SSRP1-201ENST00000278412 N4BP3O15049 544 aa12.94□□□□□ -0.34
SSRP1-201ENST00000278412 MAFGO15525 162 aa12.94□□□□□ -0.34
SSRP1-201ENST00000278412 TGFB1I1O43294 461 aa12.94□□□□□ -0.34
SSRP1-201ENST00000278412 ZNF286BP0CG31 522 aa12.94□□□□□ -0.34
SSRP1-201ENST00000278412 SFNP31947 248 aa12.94□□□□□ -0.34
SSRP1-201ENST00000278412 CHMP4BP1P59074 171 aa12.94□□□□□ -0.34
SSRP1-201ENST00000278412 MIIPQ5JXC2 388 aa12.94□□□□□ -0.34
SSRP1-201ENST00000278412 GPR20Q99678 358 aa12.94□□□□□ -0.34
SSRP1-201ENST00000278412 SENP7Q9BQF6 1050 aa12.94□□□□□ -0.34
SSRP1-201ENST00000278412 ZHX1Q9UKY1 873 aaPredicted RBP12.94□□□□□ -0.34
SSRP1-201ENST00000278412 C17orf99Q6UX52 265 aa12.94□□□□□ -0.34
SSRP1-201ENST00000278412 SMC1BQ8NDV3 1235 aa12.94□□□□□ -0.34
SSRP1-201ENST00000278412 CCDC43Q96MW1 224 aaKnown RBP12.94□□□□□ -0.34
SSRP1-201ENST00000278412 IGSF9BQ9UPX0 1349 aa12.93□□□□□ -0.34
SSRP1-201ENST00000278412 EVPLQ92817 2033 aa12.93□□□□□ -0.34
SSRP1-201ENST00000278412 MANSC4A6NHS7 340 aaPredicted RBP12.93□□□□□ -0.34
SSRP1-201ENST00000278412 TLR2O60603 784 aa12.93□□□□□ -0.34
SSRP1-201ENST00000278412 TBC1D8O95759 1140 aa12.93□□□□□ -0.34
SSRP1-201ENST00000278412 CDC25BP30305 580 aa12.93□□□□□ -0.34
SSRP1-201ENST00000278412 ZNF131P52739 623 aa12.93□□□□□ -0.34
SSRP1-201ENST00000278412 CELF3Q5SZQ8 465 aaKnown RBP12.93□□□□□ -0.34
SSRP1-201ENST00000278412 MIS18BP1Q6P0N0 1132 aa12.93□□□□□ -0.34
SSRP1-201ENST00000278412 ZNF720Q7Z2F6 126 aa12.93□□□□□ -0.34
SSRP1-201ENST00000278412 FAM178BQ8IXR5 827 aa12.93□□□□□ -0.34
SSRP1-201ENST00000278412 SMAP1Q8IYB5 467 aaPredicted RBP12.93□□□□□ -0.34
SSRP1-201ENST00000278412 CDHR1Q96JP9 859 aa12.93□□□□□ -0.34
SSRP1-201ENST00000278412 PPP1R16BQ96T49 567 aa12.93□□□□□ -0.34
SSRP1-201ENST00000278412 CYP26B1Q9NR63 512 aa12.93□□□□□ -0.34
SSRP1-201ENST00000278412 LIMA1Q9UHB6 759 aaKnown RBP12.93□□□□□ -0.34
SSRP1-201ENST00000278412 ZKSCAN5Q9Y2L8 839 aa12.93□□□□□ -0.34
SSRP1-201ENST00000278412 COL4A3BPQ9Y5P4 624 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms