RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 CYP3A4P08684 503 aa14.48□□□□□ -0.09
CD44-203ENST00000278386 GNA11P29992 359 aa14.48□□□□□ -0.09
CD44-203ENST00000278386 CLUL1Q15846 466 aa14.48□□□□□ -0.09
CD44-203ENST00000278386 ZNF484Q5JVG2 852 aa14.48□□□□□ -0.09
CD44-203ENST00000278386 MCTP2Q6DN12 878 aa14.48□□□□□ -0.09
CD44-203ENST00000278386 SWSAP1Q6NVH7 229 aa14.48□□□□□ -0.09
CD44-203ENST00000278386 BICD2Q8TD16 824 aa14.48□□□□□ -0.09
CD44-203ENST00000278386 RASGRP4Q8TDF6 673 aa14.48□□□□□ -0.09
CD44-203ENST00000278386 LRFN3Q9BTN0 628 aa14.48□□□□□ -0.09
CD44-203ENST00000278386 PLVAPQ9BX97 442 aa14.48□□□□□ -0.09
CD44-203ENST00000278386 SLC26A6Q9BXS9 759 aa14.48□□□□□ -0.09
CD44-203ENST00000278386 ALG13Q9NP73 1137 aaKnown RBP14.48□□□□□ -0.09
CD44-203ENST00000278386 CD320Q9NPF0 282 aa14.48□□□□□ -0.09
CD44-203ENST00000278386 SAMM50Q9Y512 469 aa14.48□□□□□ -0.09
CD44-203ENST00000278386 PRPF3O43395 683 aaKnown RBP14.47□□□□□ -0.09
CD44-203ENST00000278386 PSAPP07602 524 aa14.47□□□□□ -0.09
CD44-203ENST00000278386 RPS6KB1P23443 525 aa14.47□□□□□ -0.09
CD44-203ENST00000278386 HSPA4P34932 840 aa14.47□□□□□ -0.09
CD44-203ENST00000278386 GATMP50440 423 aa14.47□□□□□ -0.09
CD44-203ENST00000278386 PKN1Q16512 942 aa14.47□□□□□ -0.09
CD44-203ENST00000278386 PRR16Q569H4 304 aa14.47□□□□□ -0.09
CD44-203ENST00000278386 ODR4Q5SWX8 454 aa14.47□□□□□ -0.09
CD44-203ENST00000278386 SPOUT1Q5T280 376 aaKnown RBP14.47□□□□□ -0.09
CD44-203ENST00000278386 ZNF746Q6NUN9 644 aaPredicted RBP14.47□□□□□ -0.09
CD44-203ENST00000278386 RTN4RL1Q86UN2 441 aaPredicted RBP14.47□□□□□ -0.09
CD44-203ENST00000278386 SMAP1Q8IYB5 467 aaPredicted RBP14.47□□□□□ -0.09
CD44-203ENST00000278386 METTL13Q8N6R0 699 aa14.47□□□□□ -0.09
CD44-203ENST00000278386 PPP2R3CQ969Q6 453 aa14.47□□□□□ -0.09
CD44-203ENST00000278386 IGFLR1Q9H665 355 aa14.47□□□□□ -0.09
CD44-203ENST00000278386 TBC1D22BQ9NU19 505 aa14.47□□□□□ -0.09
CD44-203ENST00000278386 NOC2LQ9Y3T9 749 aaKnown RBP14.47□□□□□ -0.09
CD44-203ENST00000278386 ADAMTS3O15072 1205 aa14.46□□□□□ -0.09
CD44-203ENST00000278386 DHX15O43143 795 aaKnown RBP14.46□□□□□ -0.09
CD44-203ENST00000278386 NCK2O43639 380 aa14.46□□□□□ -0.09
CD44-203ENST00000278386 REC8O95072 547 aa14.46□□□□□ -0.09
CD44-203ENST00000278386 PSMA5P28066 241 aa14.46□□□□□ -0.09
CD44-203ENST00000278386 SARSP49591 514 aaKnown RBP14.46□□□□□ -0.09
CD44-203ENST00000278386 HYAL1Q12794 435 aa14.46□□□□□ -0.09
CD44-203ENST00000278386 CRYGNQ8WXF5 182 aa14.46□□□□□ -0.09
CD44-203ENST00000278386 BBXQ8WY36 941 aaPredicted RBP14.46□□□□□ -0.09
CD44-203ENST00000278386 KCNB2Q92953 911 aa14.46□□□□□ -0.09
CD44-203ENST00000278386 P2RX5Q93086 422 aa14.46□□□□□ -0.09
CD44-203ENST00000278386 FAM122AQ96E09 287 aa14.46□□□□□ -0.09
CD44-203ENST00000278386 CCDC136Q96JN2 1154 aa14.46□□□□□ -0.09
CD44-203ENST00000278386 OSMRQ99650 979 aa14.46□□□□□ -0.09
CD44-203ENST00000278386 RNF26Q9BY78 433 aaPredicted RBP14.46□□□□□ -0.09
CD44-203ENST00000278386 TMX1Q9H3N1 280 aa14.46□□□□□ -0.09
CD44-203ENST00000278386 ERVK-5Q9HDB9 667 aa14.46□□□□□ -0.09
CD44-203ENST00000278386 VPS54Q9P1Q0 977 aa14.46□□□□□ -0.09
CD44-203ENST00000278386 GABBR1Q9UBS5 961 aa14.46□□□□□ -0.09
CD44-203ENST00000278386 PCDHB7Q9Y5E2 793 aa14.46□□□□□ -0.09
CD44-203ENST00000278386 ZBTB42B2RXF5 422 aa14.45□□□□□ -0.1
CD44-203ENST00000278386 PI4K2BG5E9Z4 385 aa14.45□□□□□ -0.1
CD44-203ENST00000278386 CHMP2AO43633 222 aa14.45□□□□□ -0.1
CD44-203ENST00000278386 MGEA5O60502 916 aa14.45□□□□□ -0.1
CD44-203ENST00000278386 C22orf31O95567 290 aa14.45□□□□□ -0.1
CD44-203ENST00000278386 VTNP04004 478 aa14.45□□□□□ -0.1
CD44-203ENST00000278386 ITGB1P05556 798 aa14.45□□□□□ -0.1
CD44-203ENST00000278386 GTF2F1P35269 517 aaKnown RBP eCLIP14.45□□□□□ -0.1
CD44-203ENST00000278386 PLA2G5P39877 138 aa14.45□□□□□ -0.1
CD44-203ENST00000278386 NDUFV1P49821 464 aa14.45□□□□□ -0.1
CD44-203ENST00000278386 CCT2P78371 535 aaKnown RBP14.45□□□□□ -0.1
CD44-203ENST00000278386 COL19A1Q14993 1142 aa14.45□□□□□ -0.1
CD44-203ENST00000278386 KIZQ2M2Z5 673 aa14.45□□□□□ -0.1
CD44-203ENST00000278386 KIAA0319LQ8IZA0 1049 aa14.45□□□□□ -0.1
CD44-203ENST00000278386 KLHL23Q8NBE8 558 aa14.45□□□□□ -0.1
CD44-203ENST00000278386 TMEM40Q8WWA1 233 aa14.45□□□□□ -0.1
CD44-203ENST00000278386 FAM167AQ96KS9 214 aa14.45□□□□□ -0.1
CD44-203ENST00000278386 ADAM2Q99965 735 aa14.45□□□□□ -0.1
CD44-203ENST00000278386 CDHR5Q9HBB8 845 aa14.45□□□□□ -0.1
CD44-203ENST00000278386 NCOA5Q9HCD5 579 aaKnown RBP14.45□□□□□ -0.1
CD44-203ENST00000278386 RNF216Q9NWF9 866 aaPredicted RBP14.45□□□□□ -0.1
CD44-203ENST00000278386 PLAGL2Q9UPG8 496 aa14.45□□□□□ -0.1
CD44-203ENST00000278386 CEP131Q9UPN4 1083 aa14.45□□□□□ -0.1
CD44-203ENST00000278386 AKT3Q9Y243 479 aa14.45□□□□□ -0.1
CD44-203ENST00000278386 TBKBP1A7MCY6 615 aa14.44□□□□□ -0.1
CD44-203ENST00000278386 WDR64B1ANS9 1081 aa14.44□□□□□ -0.1
CD44-203ENST00000278386 GPR182O15218 404 aa14.44□□□□□ -0.1
CD44-203ENST00000278386 LINC01565O15544 149 aa14.44□□□□□ -0.1
CD44-203ENST00000278386 GPR37L1O60883 481 aa14.44□□□□□ -0.1
CD44-203ENST00000278386 TBX10O75333 385 aa14.44□□□□□ -0.1
CD44-203ENST00000278386 ATP4AP20648 1035 aa14.44□□□□□ -0.1
CD44-203ENST00000278386 CLCN3P51790 818 aa14.44□□□□□ -0.1
CD44-203ENST00000278386 NAALADL2Q58DX5 795 aa14.44□□□□□ -0.1
CD44-203ENST00000278386 FAM228AQ86W67 206 aa14.44□□□□□ -0.1
CD44-203ENST00000278386 POF1BQ8WVV4 589 aa14.44□□□□□ -0.1
CD44-203ENST00000278386 MAP7D2Q96T17 732 aa14.44□□□□□ -0.1
CD44-203ENST00000278386 C11orf16Q9NQ32 467 aa14.44□□□□□ -0.1
CD44-203ENST00000278386 C1orf112Q9NSG2 853 aa14.44□□□□□ -0.1
CD44-203ENST00000278386 PRKAG3Q9UGI9 489 aa14.44□□□□□ -0.1
CD44-203ENST00000278386 ST3GAL5Q9UNP4 418 aa14.44□□□□□ -0.1
CD44-203ENST00000278386 PCDHA10Q9Y5I2 948 aa14.44□□□□□ -0.1
CD44-203ENST00000278386 MAFBQ9Y5Q3 323 aaPredicted RBP14.44□□□□□ -0.1
CD44-203ENST00000278386 C5orf42Q9H799 3197 aa14.44□□□□□ -0.1
CD44-203ENST00000278386 IFNAR1P17181 557 aa14.43□□□□□ -0.1
CD44-203ENST00000278386 DNAJB1P25685 340 aa14.43□□□□□ -0.1
CD44-203ENST00000278386 LTBRP36941 435 aa14.43□□□□□ -0.1
CD44-203ENST00000278386 CRYBB1P53674 252 aaPredicted RBP14.43□□□□□ -0.1
CD44-203ENST00000278386 NLRP5P59047 1200 aa14.43□□□□□ -0.1
CD44-203ENST00000278386 ZP2Q05996 745 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms