RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 AKAP3O75969 853 aa10.55□□□□□ -0.72
TRIM55-201ENST00000276573 NOL4O94818 638 aa10.55□□□□□ -0.72
TRIM55-201ENST00000276573 ABL1P00519 1130 aa10.55□□□□□ -0.72
TRIM55-201ENST00000276573 CYLC1P35663 651 aaPredicted RBP10.55□□□□□ -0.72
TRIM55-201ENST00000276573 KRT83P78385 493 aa10.55□□□□□ -0.72
TRIM55-201ENST00000276573 UGCGQ16739 394 aa10.55□□□□□ -0.72
TRIM55-201ENST00000276573 ZNF746Q6NUN9 644 aaPredicted RBP10.55□□□□□ -0.72
TRIM55-201ENST00000276573 USP50Q70EL3 339 aaPredicted RBP10.55□□□□□ -0.72
TRIM55-201ENST00000276573 ILDR2Q71H61 639 aa10.55□□□□□ -0.72
TRIM55-201ENST00000276573 BAP1Q92560 729 aa10.55□□□□□ -0.72
TRIM55-201ENST00000276573 ERO1AQ96HE7 468 aa10.55□□□□□ -0.72
TRIM55-201ENST00000276573 MOV10L1Q9BXT6 1211 aaKnown RBP10.55□□□□□ -0.72
TRIM55-201ENST00000276573 METTL14Q9HCE5 456 aaKnown RBP10.55□□□□□ -0.72
TRIM55-201ENST00000276573 ANKEF1Q9NU02 776 aa10.55□□□□□ -0.72
TRIM55-201ENST00000276573 UBE4BO95155 1302 aa10.55□□□□□ -0.72
TRIM55-201ENST00000276573 SPATA31C2B4DYI2 1134 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 EIF3CLB5ME19 914 aaKnown RBP10.54□□□□□ -0.72
TRIM55-201ENST00000276573 SLC16A3O15427 465 aaKnown RBP10.54□□□□□ -0.72
TRIM55-201ENST00000276573 RGS20O76081 388 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 MAPTP10636 758 aaKnown RBP10.54□□□□□ -0.72
TRIM55-201ENST00000276573 KCNA2P16389 499 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 YWHABP31946 246 aaKnown RBP10.54□□□□□ -0.72
TRIM55-201ENST00000276573 CASP4P49662 377 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 PPATQ06203 517 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 NAA30Q147X3 362 aaPredicted RBP10.54□□□□□ -0.72
TRIM55-201ENST00000276573 ARHGAP29Q52LW3 1261 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 PDXDC1Q6P996 788 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 ZNF662Q6ZS27 426 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 RRAGAQ7L523 313 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 KSR1Q8IVT5 923 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 ZNF710Q8N1W2 664 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 ZC3H15Q8WU90 426 aaKnown RBP10.54□□□□□ -0.72
TRIM55-201ENST00000276573 EIF3CQ99613 913 aaKnown RBP10.54□□□□□ -0.72
TRIM55-201ENST00000276573 IKZF4Q9H2S9 585 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 ELP3Q9H9T3 547 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 DMAC2Q9NW81 257 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 BTBD7Q9P203 1132 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 TCEAL9Q9UHQ7 104 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 PCDHA10Q9Y5I2 948 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 LRRC53A6NM62 1247 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 CXCL11O14625 94 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 IRF6O14896 467 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 PPP1R37O75864 691 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 NFASCO94856 1347 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 AFPP02771 609 aaKnown RBP10.54□□□□□ -0.72
TRIM55-201ENST00000276573 EPB41P11171 864 aaKnown RBP10.54□□□□□ -0.72
TRIM55-201ENST00000276573 HERVK_113P62684 666 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 ZNF569Q5MCW4 686 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 GADL1Q6ZQY3 521 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 MAEAQ7L5Y9 396 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 CACNA2D4Q7Z3S7 1137 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 ERO1BQ86YB8 467 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 RIOX2Q8IUF8 465 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 ANKRD13AQ8IZ07 590 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 PROCA1Q8NCQ7 364 aaPredicted RBP10.54□□□□□ -0.72
TRIM55-201ENST00000276573 CDCA5Q96FF9 252 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 BORCS6Q96GS4 357 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 L3MBTL3Q96JM7 780 aaPredicted RBP10.54□□□□□ -0.72
TRIM55-201ENST00000276573 CDHR1Q96JP9 859 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 IWS1Q96ST2 819 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 CRACR2AQ9BSW2 395 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 TIPINQ9BVW5 301 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 LSM14BQ9BX40 385 aaKnown RBP10.54□□□□□ -0.72
TRIM55-201ENST00000276573 CEP72Q9P209 647 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 ARHGAP20Q9P2F6 1191 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 LARSQ9P2J5 1176 aaKnown RBP10.54□□□□□ -0.72
TRIM55-201ENST00000276573 ZMYM2Q9UBW7 1377 aa10.54□□□□□ -0.72
TRIM55-201ENST00000276573 WDR90Q96KV7 1748 aa10.53□□□□□ -0.72
TRIM55-201ENST00000276573 A0A0G2JLL6 359 aaPredicted RBP10.53□□□□□ -0.72
TRIM55-201ENST00000276573 EPHX2P34913 555 aa10.53□□□□□ -0.72
TRIM55-201ENST00000276573 NF2P35240 595 aa10.53□□□□□ -0.72
TRIM55-201ENST00000276573 PSMC2P35998 433 aaKnown RBP10.53□□□□□ -0.72
TRIM55-201ENST00000276573 NCBP1Q09161 790 aaKnown RBP10.53□□□□□ -0.72
TRIM55-201ENST00000276573 XKR9Q5GH70 373 aa10.53□□□□□ -0.72
TRIM55-201ENST00000276573 PRRT2Q7Z6L0 340 aaPredicted RBP10.53□□□□□ -0.72
TRIM55-201ENST00000276573 DNERQ8NFT8 737 aa10.53□□□□□ -0.72
TRIM55-201ENST00000276573 ANKRD7Q92527 254 aa10.53□□□□□ -0.72
TRIM55-201ENST00000276573 SYN2Q92777 582 aaPredicted RBP10.53□□□□□ -0.72
TRIM55-201ENST00000276573 CLMNQ96JQ2 1002 aa10.53□□□□□ -0.72
TRIM55-201ENST00000276573 CCDC42Q96M95 316 aa10.53□□□□□ -0.72
TRIM55-201ENST00000276573 MKNK1Q9BUB5 465 aa10.53□□□□□ -0.72
TRIM55-201ENST00000276573 GBP3Q9H0R5 595 aa10.53□□□□□ -0.72
TRIM55-201ENST00000276573 NUCKS1Q9H1E3 243 aaKnown RBP10.53□□□□□ -0.72
TRIM55-201ENST00000276573 HAUS4Q9H6D7 363 aa10.53□□□□□ -0.72
TRIM55-201ENST00000276573 MYO1AQ9UBC5 1043 aa10.53□□□□□ -0.72
TRIM55-201ENST00000276573 FBXO40Q9UH90 709 aa10.53□□□□□ -0.72
TRIM55-201ENST00000276573 LOXHD1Q8IVV2 1947 aa10.53□□□□□ -0.72
TRIM55-201ENST00000276573 TMEM150BA6NC51 233 aa10.52□□□□□ -0.72
TRIM55-201ENST00000276573 BACH1O14867 736 aa10.52□□□□□ -0.72
TRIM55-201ENST00000276573 PEX10O60683 326 aa10.52□□□□□ -0.72
TRIM55-201ENST00000276573 USO1O60763 962 aaKnown RBP10.52□□□□□ -0.72
TRIM55-201ENST00000276573 DKC1O60832 514 aaKnown RBP eCLIP10.52□□□□□ -0.72
TRIM55-201ENST00000276573 STBD1O95210 358 aa10.52□□□□□ -0.72
TRIM55-201ENST00000276573 PLEKP08567 350 aaPredicted RBP10.52□□□□□ -0.72
TRIM55-201ENST00000276573 XRCC5P13010 732 aaKnown RBP10.52□□□□□ -0.72
TRIM55-201ENST00000276573 PLS3P13797 630 aa10.52□□□□□ -0.72
TRIM55-201ENST00000276573 EIF4A3P38919 411 aaKnown RBP10.52□□□□□ -0.72
TRIM55-201ENST00000276573 CNTN2Q02246 1040 aa10.52□□□□□ -0.72
TRIM55-201ENST00000276573 ALCAMQ13740 583 aa10.52□□□□□ -0.72
TRIM55-201ENST00000276573 STXBP2Q15833 593 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms