RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 ZSWIM6Q9HCJ5 1215 aa19.84■□□□□ 0.77
CSNK1D-201ENST00000269361 GINS2Q9Y248 185 aa19.84■□□□□ 0.77
CSNK1D-201ENST00000269361 PCDHA10Q9Y5I2 948 aa19.84■□□□□ 0.77
CSNK1D-201ENST00000269361 TCF20Q9UGU0 1960 aaKnown RBP19.83■□□□□ 0.77
CSNK1D-201ENST00000269361 PSAPP07602 524 aa19.83■□□□□ 0.77
CSNK1D-201ENST00000269361 NFX1Q12986 1120 aaKnown RBP19.83■□□□□ 0.77
CSNK1D-201ENST00000269361 PUS10Q3MIT2 529 aaKnown RBP19.83■□□□□ 0.77
CSNK1D-201ENST00000269361 PTCRAQ6ISU1 281 aaPredicted RBP19.83■□□□□ 0.77
CSNK1D-201ENST00000269361 LENG9Q96B70 501 aa19.83■□□□□ 0.77
CSNK1D-201ENST00000269361 PABPC5Q96DU9 382 aaKnown RBP19.83■□□□□ 0.77
CSNK1D-201ENST00000269361 EPHX3Q9H6B9 360 aa19.83■□□□□ 0.77
CSNK1D-201ENST00000269361 SH3GLB2Q9NR46 395 aa19.83■□□□□ 0.77
CSNK1D-201ENST00000269361 VPS54Q9P1Q0 977 aa19.83■□□□□ 0.77
CSNK1D-201ENST00000269361 TCEAL9Q9UHQ7 104 aa19.83■□□□□ 0.77
CSNK1D-201ENST00000269361 NOC2LQ9Y3T9 749 aaKnown RBP19.83■□□□□ 0.77
CSNK1D-201ENST00000269361 MRPL42Q9Y6G3 142 aaKnown RBP19.83■□□□□ 0.77
CSNK1D-201ENST00000269361 GRXCR2A6NFK2 248 aa19.82■□□□□ 0.76
CSNK1D-201ENST00000269361 H3BQ06 376 aaPredicted RBP19.82■□□□□ 0.76
CSNK1D-201ENST00000269361 EPB41L2O43491 1005 aaKnown RBP19.82■□□□□ 0.76
CSNK1D-201ENST00000269361 RPS6KA5O75582 802 aa19.82■□□□□ 0.76
CSNK1D-201ENST00000269361 C22orf31O95567 290 aa19.82■□□□□ 0.76
CSNK1D-201ENST00000269361 ERVK-5Q9HDB9 667 aa19.82■□□□□ 0.76
CSNK1D-201ENST00000269361 CD320Q9NPF0 282 aa19.82■□□□□ 0.76
CSNK1D-201ENST00000269361 GABBR1Q9UBS5 961 aa19.82■□□□□ 0.76
CSNK1D-201ENST00000269361 PLAGL2Q9UPG8 496 aa19.82■□□□□ 0.76
CSNK1D-201ENST00000269361 NCK2O43639 380 aa19.81■□□□□ 0.76
CSNK1D-201ENST00000269361 EDIL3O43854 480 aa19.81■□□□□ 0.76
CSNK1D-201ENST00000269361 USP11P51784 963 aa19.81■□□□□ 0.76
CSNK1D-201ENST00000269361 NLRP5P59047 1200 aa19.81■□□□□ 0.76
CSNK1D-201ENST00000269361 TOB2Q14106 344 aaPredicted RBP19.81■□□□□ 0.76
CSNK1D-201ENST00000269361 EP400NLQ6ZTU2 488 aa19.81■□□□□ 0.76
CSNK1D-201ENST00000269361 TRMT1LQ7Z2T5 733 aaKnown RBP19.81■□□□□ 0.76
CSNK1D-201ENST00000269361 FAM178BQ8IXR5 827 aa19.81■□□□□ 0.76
CSNK1D-201ENST00000269361 METTL13Q8N6R0 699 aa19.81■□□□□ 0.76
CSNK1D-201ENST00000269361 TMEM40Q8WWA1 233 aa19.81■□□□□ 0.76
CSNK1D-201ENST00000269361 ALG13Q9NP73 1137 aaKnown RBP19.81■□□□□ 0.76
CSNK1D-201ENST00000269361 LRFN2Q9ULH4 789 aa19.81■□□□□ 0.76
CSNK1D-201ENST00000269361 SAMM50Q9Y512 469 aa19.81■□□□□ 0.76
CSNK1D-201ENST00000269361 CYP46A1Q9Y6A2 500 aa19.81■□□□□ 0.76
CSNK1D-201ENST00000269361 KAT6AQ92794 2004 aa19.81■□□□□ 0.76
CSNK1D-201ENST00000269361 WDR64B1ANS9 1081 aa19.8■□□□□ 0.76
CSNK1D-201ENST00000269361 GPR182O15218 404 aa19.8■□□□□ 0.76
CSNK1D-201ENST00000269361 MSH4O15457 936 aa19.8■□□□□ 0.76
CSNK1D-201ENST00000269361 MGEA5O60502 916 aa19.8■□□□□ 0.76
CSNK1D-201ENST00000269361 IL9P15248 144 aa19.8■□□□□ 0.76
CSNK1D-201ENST00000269361 SARSP49591 514 aaKnown RBP19.8■□□□□ 0.76
CSNK1D-201ENST00000269361 CRYBB1P53674 252 aaPredicted RBP19.8■□□□□ 0.76
CSNK1D-201ENST00000269361 SSRP1Q08945 709 aaKnown RBP19.8■□□□□ 0.76
CSNK1D-201ENST00000269361 KIZQ2M2Z5 673 aa19.8■□□□□ 0.76
CSNK1D-201ENST00000269361 PAN2Q504Q3 1202 aaKnown RBP19.8■□□□□ 0.76
CSNK1D-201ENST00000269361 NAALADL2Q58DX5 795 aa19.8■□□□□ 0.76
CSNK1D-201ENST00000269361 ODR4Q5SWX8 454 aa19.8■□□□□ 0.76
CSNK1D-201ENST00000269361 TRIM22Q8IYM9 498 aa19.8■□□□□ 0.76
CSNK1D-201ENST00000269361 KHSRPQ92945 711 aaKnown RBP eCLIP19.8■□□□□ 0.76
CSNK1D-201ENST00000269361 P2RX5Q93086 422 aa19.8■□□□□ 0.76
CSNK1D-201ENST00000269361 CLDND1Q9NY35 253 aa19.8■□□□□ 0.76
CSNK1D-201ENST00000269361 RAPGEFL1Q9UHV5 662 aa19.8■□□□□ 0.76
CSNK1D-201ENST00000269361 ST3GAL5Q9UNP4 418 aa19.8■□□□□ 0.76
CSNK1D-201ENST00000269361 CEP131Q9UPN4 1083 aa19.8■□□□□ 0.76
CSNK1D-201ENST00000269361 PCDHB7Q9Y5E2 793 aa19.8■□□□□ 0.76
CSNK1D-201ENST00000269361 DENND3A2RUS2 1198 aa19.79■□□□□ 0.76
CSNK1D-201ENST00000269361 MMP1P03956 469 aa19.79■□□□□ 0.76
CSNK1D-201ENST00000269361 IBSPP21815 317 aaPredicted RBP19.79■□□□□ 0.76
CSNK1D-201ENST00000269361 GATMP50440 423 aa19.79■□□□□ 0.76
CSNK1D-201ENST00000269361 HYAL1Q12794 435 aa19.79■□□□□ 0.76
CSNK1D-201ENST00000269361 CAMK1Q14012 370 aa19.79■□□□□ 0.76
CSNK1D-201ENST00000269361 CTC1Q2NKJ3 1217 aa19.79■□□□□ 0.76
CSNK1D-201ENST00000269361 GJD3Q8N144 294 aa19.79■□□□□ 0.76
CSNK1D-201ENST00000269361 ZNF274Q96GC6 653 aaPredicted RBP19.79■□□□□ 0.76
CSNK1D-201ENST00000269361 FAM167AQ96KS9 214 aa19.79■□□□□ 0.76
CSNK1D-201ENST00000269361 PPP1R16BQ96T49 567 aa19.79■□□□□ 0.76
CSNK1D-201ENST00000269361 RIT2Q99578 217 aa19.79■□□□□ 0.76
CSNK1D-201ENST00000269361 ADAM2Q99965 735 aa19.79■□□□□ 0.76
CSNK1D-201ENST00000269361 DISC1Q9NRI5 854 aa19.79■□□□□ 0.76
CSNK1D-201ENST00000269361 RGS18Q9NS28 235 aa19.79■□□□□ 0.76
CSNK1D-201ENST00000269361 C1orf112Q9NSG2 853 aa19.79■□□□□ 0.76
CSNK1D-201ENST00000269361 MAGEB2O15479 319 aa19.78■□□□□ 0.76
CSNK1D-201ENST00000269361 GPR32O75388 356 aa19.78■□□□□ 0.76
CSNK1D-201ENST00000269361 VTNP04004 478 aa19.78■□□□□ 0.76
CSNK1D-201ENST00000269361 LTBRP36941 435 aa19.78■□□□□ 0.76
CSNK1D-201ENST00000269361 SLC24A5Q71RS6 500 aa19.78■□□□□ 0.76
CSNK1D-201ENST00000269361 TBCKQ8TEA7 893 aa19.78■□□□□ 0.76
CSNK1D-201ENST00000269361 SLC5A5Q92911 643 aa19.78■□□□□ 0.76
CSNK1D-201ENST00000269361 OSMRQ99650 979 aa19.78■□□□□ 0.76
CSNK1D-201ENST00000269361 LARP6Q9BRS8 491 aaKnown RBP19.78■□□□□ 0.76
CSNK1D-201ENST00000269361 TM6SF1Q9BZW5 370 aa19.78■□□□□ 0.76
CSNK1D-201ENST00000269361 NRBP2Q9NSY0 501 aa19.78■□□□□ 0.76
CSNK1D-201ENST00000269361 RNF216Q9NWF9 866 aaPredicted RBP19.78■□□□□ 0.76
CSNK1D-201ENST00000269361 PCDHA4Q9UN74 947 aa19.78■□□□□ 0.76
CSNK1D-201ENST00000269361 TTC3P53804 2025 aa19.77■□□□□ 0.76
CSNK1D-201ENST00000269361 CPLX1O14810 134 aa19.77■□□□□ 0.76
CSNK1D-201ENST00000269361 ZNF862O60290 1169 aa19.77■□□□□ 0.76
CSNK1D-201ENST00000269361 GAS7O60861 476 aa19.77■□□□□ 0.76
CSNK1D-201ENST00000269361 CSPG5O95196 566 aa19.77■□□□□ 0.76
CSNK1D-201ENST00000269361 ITGB1P05556 798 aa19.77■□□□□ 0.76
CSNK1D-201ENST00000269361 DNAJB1P25685 340 aa19.77■□□□□ 0.76
CSNK1D-201ENST00000269361 EFCAB12Q6NXP0 572 aa19.77■□□□□ 0.76
CSNK1D-201ENST00000269361 KLHL23Q8NBE8 558 aa19.77■□□□□ 0.76
CSNK1D-201ENST00000269361 SPPL3Q8TCT6 385 aa19.77■□□□□ 0.76
CSNK1D-201ENST00000269361 C22orf23Q9BZE7 217 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms