RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 OSGEPQ9NPF4 335 aa17.59■□□□□ 0.41
GPC1-201ENST00000264039 TXLNGQ9NUQ3 528 aa17.59■□□□□ 0.41
GPC1-201ENST00000264039 MEIS1O00470 390 aa17.59■□□□□ 0.41
GPC1-201ENST00000264039 EEF2P13639 858 aaKnown RBP17.59■□□□□ 0.41
GPC1-201ENST00000264039 ATP5DP30049 168 aa17.59■□□□□ 0.41
GPC1-201ENST00000264039 PFKFB3Q16875 520 aaPredicted RBP17.59■□□□□ 0.41
GPC1-201ENST00000264039 C6orf163Q5TEZ5 329 aa17.59■□□□□ 0.41
GPC1-201ENST00000264039 ZNF746Q6NUN9 644 aaPredicted RBP17.59■□□□□ 0.41
GPC1-201ENST00000264039 MIS18BP1Q6P0N0 1132 aa17.59■□□□□ 0.41
GPC1-201ENST00000264039 SLC12A6Q9UHW9 1150 aa17.59■□□□□ 0.41
GPC1-201ENST00000264039 SSU72P8A0A1W2PR75 194 aa17.58■□□□□ 0.41
GPC1-201ENST00000264039 ADAMTS3O15072 1205 aa17.58■□□□□ 0.41
GPC1-201ENST00000264039 DNAJC3Q13217 504 aa17.58■□□□□ 0.41
GPC1-201ENST00000264039 ERMARDQ5T6L9 678 aa17.58■□□□□ 0.41
GPC1-201ENST00000264039 RNF220Q5VTB9 566 aa17.58■□□□□ 0.41
GPC1-201ENST00000264039 KIAA0895Q8NCT3 520 aa17.58■□□□□ 0.41
GPC1-201ENST00000264039 SMC6Q96SB8 1091 aa17.58■□□□□ 0.41
GPC1-201ENST00000264039 TMEM260Q9NX78 707 aa17.58■□□□□ 0.41
GPC1-201ENST00000264039 HDAC9Q9UKV0 1011 aa17.58■□□□□ 0.41
GPC1-201ENST00000264039 A0A0G2JND7 137 aa17.58■□□□□ 0.4
GPC1-201ENST00000264039 IRF6O14896 467 aa17.58■□□□□ 0.4
GPC1-201ENST00000264039 GCNT3O95395 438 aa17.58■□□□□ 0.4
GPC1-201ENST00000264039 USP11P51784 963 aa17.58■□□□□ 0.4
GPC1-201ENST00000264039 DEUP1Q05D60 604 aa17.58■□□□□ 0.4
GPC1-201ENST00000264039 NAALADL2Q58DX5 795 aa17.58■□□□□ 0.4
GPC1-201ENST00000264039 USP17L2Q6R6M4 530 aa17.58■□□□□ 0.4
GPC1-201ENST00000264039 ISLR2Q6UXK2 745 aa17.58■□□□□ 0.4
GPC1-201ENST00000264039 VPS37BQ9H9H4 285 aa17.58■□□□□ 0.4
GPC1-201ENST00000264039 FRMPD2Q68DX3 1309 aaPredicted RBP17.58■□□□□ 0.4
GPC1-201ENST00000264039 NPHP3-ACAD11A0A0J9YXS1 232 aa17.58■□□□□ 0.4
GPC1-201ENST00000264039 PYGLP06737 847 aa17.58■□□□□ 0.4
GPC1-201ENST00000264039 KCNA3P22001 575 aa17.58■□□□□ 0.4
GPC1-201ENST00000264039 CASP7P55210 303 aa17.58■□□□□ 0.4
GPC1-201ENST00000264039 CYP4A11Q02928 519 aa17.58■□□□□ 0.4
GPC1-201ENST00000264039 MTM1Q13496 603 aa17.58■□□□□ 0.4
GPC1-201ENST00000264039 HIPK4Q8NE63 616 aa17.58■□□□□ 0.4
GPC1-201ENST00000264039 COA7Q96BR5 231 aa17.58■□□□□ 0.4
GPC1-201ENST00000264039 DDX50Q9BQ39 737 aaKnown RBP17.58■□□□□ 0.4
GPC1-201ENST00000264039 USP17L8P0C7I0 530 aa17.57■□□□□ 0.4
GPC1-201ENST00000264039 TROAPQ12815 778 aa17.57■□□□□ 0.4
GPC1-201ENST00000264039 ZNF365Q70YC5 407 aa17.57■□□□□ 0.4
GPC1-201ENST00000264039 HS2ST1Q7LGA3 356 aa17.57■□□□□ 0.4
GPC1-201ENST00000264039 KRT25Q7Z3Z0 450 aa17.57■□□□□ 0.4
GPC1-201ENST00000264039 SPIRE2Q8WWL2 714 aa17.57■□□□□ 0.4
GPC1-201ENST00000264039 INPP4AQ96PE3 977 aaPredicted RBP17.57■□□□□ 0.4
GPC1-201ENST00000264039 TTC1Q99614 292 aa17.57■□□□□ 0.4
GPC1-201ENST00000264039 LRRC27Q9C0I9 530 aa17.57■□□□□ 0.4
GPC1-201ENST00000264039 GCNT4Q9P109 453 aa17.57■□□□□ 0.4
GPC1-201ENST00000264039 SFI1A8K8P3 1242 aa17.57■□□□□ 0.4
GPC1-201ENST00000264039 PDE8AO60658 829 aa17.57■□□□□ 0.4
GPC1-201ENST00000264039 FECHP22830 423 aa17.57■□□□□ 0.4
GPC1-201ENST00000264039 KIAA1755Q5JYT7 1200 aa17.57■□□□□ 0.4
GPC1-201ENST00000264039 AADACL2Q6P093 401 aa17.57■□□□□ 0.4
GPC1-201ENST00000264039 C18orf8Q96DM3 657 aa17.57■□□□□ 0.4
GPC1-201ENST00000264039 NT5C3AQ9H0P0 336 aa17.57■□□□□ 0.4
GPC1-201ENST00000264039 CFAP69A5D8W1 941 aa17.57■□□□□ 0.4
GPC1-201ENST00000264039 F8W031 263 aaPredicted RBP17.57■□□□□ 0.4
GPC1-201ENST00000264039 GHRP10912 638 aa17.57■□□□□ 0.4
GPC1-201ENST00000264039 FERP16591 822 aa17.57■□□□□ 0.4
GPC1-201ENST00000264039 CYP2J2P51589 502 aa17.57■□□□□ 0.4
GPC1-201ENST00000264039 NSMFQ6X4W1 530 aa17.57■□□□□ 0.4
GPC1-201ENST00000264039 CD302Q8IX05 232 aa17.57■□□□□ 0.4
GPC1-201ENST00000264039 FAM118BQ9BPY3 351 aa17.57■□□□□ 0.4
GPC1-201ENST00000264039 A0A1W2PQJ5 194 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 SPDYE5A6NIY4 337 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 RASA4BC9J798 803 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 PPIP5K2O43314 1243 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 RASA4O43374 803 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 ENTPD5O75356 428 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 DDAH1O94760 285 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 ATF3P18847 181 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 CA4P22748 312 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 NCALDP61601 193 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 IL9RQ01113 521 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 EVX2Q03828 476 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 PABPC4Q13310 644 aaKnown RBP eCLIP17.56■□□□□ 0.4
GPC1-201ENST00000264039 KYNUQ16719 465 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 SLC44A5Q8NCS7 719 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 TMX4Q9H1E5 349 aaPredicted RBP17.56■□□□□ 0.4
GPC1-201ENST00000264039 PABPC3Q9H361 631 aaKnown RBP17.56■□□□□ 0.4
GPC1-201ENST00000264039 E9PMD0 336 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 CREB3O43889 395 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 TMED1Q13445 227 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 JAMLQ86YT9 394 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 MTFR1LQ9H019 292 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 EMILIN3Q9NT22 766 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 TACC3Q9Y6A5 838 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 SLC4A7Q9Y6M7 1214 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 PRPHP41219 470 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 GALCP54803 685 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 LRRC63Q05C16 580 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 TBC1D10BQ4KMP7 808 aaPredicted RBP17.56■□□□□ 0.4
GPC1-201ENST00000264039 UNC13DQ70J99 1090 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 C1orf54Q8WWF1 131 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 C9orf72Q96LT7 481 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 ERP44Q9BS26 406 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 CTNNAL1Q9UBT7 734 aa17.56■□□□□ 0.4
GPC1-201ENST00000264039 YY1P25490 414 aa17.55■□□□□ 0.4
GPC1-201ENST00000264039 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.55■□□□□ 0.4
GPC1-201ENST00000264039 SLITRK6Q9H5Y7 841 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms