RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 CHD4Q14839 1912 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 DENND3A2RUS2 1198 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 CLIC2O15247 247 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 KRT5P13647 590 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 YWHAEP62258 255 aaKnown RBP9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 LRRC63Q05C16 580 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 DPCR1Q3MIW9 517 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 USP49Q70CQ1 688 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 ZBTB33Q86T24 672 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 CATSPER3Q86XQ3 398 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 CNGA4Q8IV77 575 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 IGSF22Q8N9C0 903 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 RIPK3Q9Y572 518 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 TLL2Q9Y6L7 1015 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 LDHAP00338 332 aaKnown RBP9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 BCRP11274 1271 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 CYP2C9P11712 490 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 HSD17B4P51659 736 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 SURF1Q15526 300 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 LY6KQ17RY6 165 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 EARS2Q5JPH6 523 aaKnown RBP9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 AXDND1Q5T1B0 1012 aaPredicted RBP9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 SAPCD2Q86UD0 394 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 SIAH1Q8IUQ4 282 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 TAF4BQ92750 862 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 PCIF1Q9H4Z3 704 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 FANCLQ9NW38 375 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 RWDD2AQ9UIY3 292 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 HOXC6P09630 235 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 CASP1P29466 404 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 FLT3LGP49771 235 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 SLC8A3P57103 927 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 MAP3K10Q02779 954 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 ZNF484Q5JVG2 852 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 PLA2G4FQ68DD2 849 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 RNF149Q8NC42 400 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 CACTINQ8WUQ7 758 aaKnown RBP9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 BBXQ8WY36 941 aaPredicted RBP9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 SH2D3AQ9BRG2 576 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 MSTO1Q9BUK6 570 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 TRIM9Q9C026 710 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 ZCCHC17Q9NP64 241 aaKnown RBP9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 RBPJLQ9UBG7 517 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 LRP5O75197 1615 aa9.07□□□□□ -0.96
GTF3C3-201ENST00000263956 LOC102724159A0A0B4J2E5 919 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 CLDN3O15551 220 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 GAS2O43903 313 aaKnown RBP9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 MSCO60682 206 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 LPXNO60711 386 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 PPP1R11O60927 126 aaPredicted RBP9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 EMC2Q15006 297 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 PWP2Q15269 919 aaKnown RBP9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 IER5Q5VY09 327 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 GBP6Q6ZN66 633 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 CCDC186Q7Z3E2 898 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 HAUS6Q7Z4H7 955 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 MNS1Q8NEH6 495 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 ENOX1Q8TC92 643 aaKnown RBP9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 SLC5A5Q92911 643 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 CCDC42Q96M95 316 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 SENP7Q9BQF6 1050 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 PORCNQ9H237 461 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 KIAA1586Q9HCI6 787 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 GDAQ9Y2T3 454 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 UBIAD1Q9Y5Z9 338 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 MYH2Q9UKX2 1941 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 PPFIA4O75335 1185 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 RDXP35241 583 aaKnown RBP9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 MAP2K2P36507 400 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 NPEPPSP55786 919 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 TAF12Q16514 161 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 TWF2Q6IBS0 349 aaKnown RBP9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 TLK2Q86UE8 772 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 ABRAQ8N0Z2 381 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 TMEM143Q96AN5 459 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 IQCDQ96DY2 449 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 C7orf25Q9BPX7 421 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 MRPL4Q9BYD3 311 aaKnown RBP9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 RPF1Q9H9Y2 349 aaKnown RBP9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 XPNPEP3Q9NQH7 507 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 CREBZFQ9NS37 354 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 RNF216Q9NWF9 866 aaPredicted RBP9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 TAF1LQ8IZX4 1826 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 ZNF233A6NK53 670 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 IKBKBO14920 756 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 ATP2A1O14983 1001 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 AOC2O75106 756 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 CYP11B2P19099 503 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 EEF1GP26641 437 aaKnown RBP9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 ADCYAP1R1P41586 468 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 KCNB1Q14721 858 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 NAALADL2Q58DX5 795 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 EEF2KMTQ96G04 330 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 CNOT6LQ96LI5 555 aaKnown RBP9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 RTN4Q9NQC3 1192 aaKnown RBP9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 ZNF214Q9UL59 606 aaPredicted RBP9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 NID2Q14112 1375 aa9.06□□□□□ -0.96
GTF3C3-201ENST00000263956 C17orf102A2RUQ5 167 aa9.05□□□□□ -0.96
GTF3C3-201ENST00000263956 AKR1B15C9JRZ8 316 aaPredicted RBP9.05□□□□□ -0.96
GTF3C3-201ENST00000263956 SLC10A3P09131 477 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms