RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 TTC3P53804 2025 aa18.16■□□□□ 0.5
USE1-201ENST00000263897 IGSF9BQ9UPX0 1349 aa18.16■□□□□ 0.5
USE1-201ENST00000263897 CCDC194A0A1B0GVG4 234 aa18.15■□□□□ 0.5
USE1-201ENST00000263897 ZNF862O60290 1169 aa18.15■□□□□ 0.5
USE1-201ENST00000263897 LARGE1O95461 756 aa18.15■□□□□ 0.5
USE1-201ENST00000263897 C22orf31O95567 290 aa18.15■□□□□ 0.5
USE1-201ENST00000263897 JAK3P52333 1124 aa18.15■□□□□ 0.5
USE1-201ENST00000263897 KRT40Q6A162 431 aa18.15■□□□□ 0.5
USE1-201ENST00000263897 RTN4RL1Q86UN2 441 aaPredicted RBP18.15■□□□□ 0.5
USE1-201ENST00000263897 MICALL1Q8N3F8 863 aa18.15■□□□□ 0.5
USE1-201ENST00000263897 RDM1Q8NG50 284 aa18.15■□□□□ 0.5
USE1-201ENST00000263897 OXER1Q8TDS5 423 aa18.15■□□□□ 0.5
USE1-201ENST00000263897 GTF3C6Q969F1 213 aa18.15■□□□□ 0.5
USE1-201ENST00000263897 FAM167AQ96KS9 214 aa18.15■□□□□ 0.5
USE1-201ENST00000263897 YME1L1Q96TA2 773 aa18.15■□□□□ 0.5
USE1-201ENST00000263897 CDHR5Q9HBB8 845 aa18.15■□□□□ 0.5
USE1-201ENST00000263897 MTUS1Q9ULD2 1270 aa18.15■□□□□ 0.5
USE1-201ENST00000263897 PADI3Q9ULW8 664 aa18.15■□□□□ 0.5
USE1-201ENST00000263897 PRUNE2Q8WUY3 3088 aa18.15■□□□□ 0.5
USE1-201ENST00000263897 TTC28Q96AY4 2481 aa18.14■□□□□ 0.5
USE1-201ENST00000263897 MAGEB2O15479 319 aa18.14■□□□□ 0.49
USE1-201ENST00000263897 CHMP2AO43633 222 aa18.14■□□□□ 0.49
USE1-201ENST00000263897 LETM2Q2VYF4 491 aa18.14■□□□□ 0.49
USE1-201ENST00000263897 B3GNT9Q6UX72 402 aa18.14■□□□□ 0.49
USE1-201ENST00000263897 MIER3Q7Z3K6 550 aa18.14■□□□□ 0.49
USE1-201ENST00000263897 ETNPPLQ8TBG4 499 aa18.14■□□□□ 0.49
USE1-201ENST00000263897 C17orf80Q9BSJ5 609 aa18.14■□□□□ 0.49
USE1-201ENST00000263897 FTHL17Q9BXU8 183 aa18.14■□□□□ 0.49
USE1-201ENST00000263897 LMCD1Q9NZU5 365 aa18.14■□□□□ 0.49
USE1-201ENST00000263897 DDX25Q9UHL0 483 aaKnown RBP18.14■□□□□ 0.49
USE1-201ENST00000263897 CEP131Q9UPN4 1083 aa18.14■□□□□ 0.49
USE1-201ENST00000263897 PPP4R3AQ6IN85 833 aa18.13■□□□□ 0.49
USE1-201ENST00000263897 FAM43BQ6ZT52 329 aaPredicted RBP18.13■□□□□ 0.49
USE1-201ENST00000263897 NEK8Q86SG6 692 aa18.13■□□□□ 0.49
USE1-201ENST00000263897 METTL13Q8N6R0 699 aa18.13■□□□□ 0.49
USE1-201ENST00000263897 ATXN2LQ8WWM7 1075 aaKnown RBP18.13■□□□□ 0.49
USE1-201ENST00000263897 SAMD11Q96NU1 681 aa18.13■□□□□ 0.49
USE1-201ENST00000263897 TSPYL2Q9H2G4 693 aaPredicted RBP18.13■□□□□ 0.49
USE1-201ENST00000263897 UNC80Q8N2C7 3258 aa18.13■□□□□ 0.49
USE1-201ENST00000263897 EYSQ5T1H1 3165 aa18.12■□□□□ 0.49
USE1-201ENST00000263897 SLC37A4O43826 429 aa18.12■□□□□ 0.49
USE1-201ENST00000263897 OATP04181 439 aa18.12■□□□□ 0.49
USE1-201ENST00000263897 PRKCEQ02156 737 aa18.12■□□□□ 0.49
USE1-201ENST00000263897 PAK2Q13177 524 aa18.12■□□□□ 0.49
USE1-201ENST00000263897 UGCGQ16739 394 aa18.12■□□□□ 0.49
USE1-201ENST00000263897 PIK3AP1Q6ZUJ8 805 aa18.12■□□□□ 0.49
USE1-201ENST00000263897 NSUN7Q8NE18 718 aaKnown RBP18.12■□□□□ 0.49
USE1-201ENST00000263897 FBXO22Q8NEZ5 403 aa18.12■□□□□ 0.49
USE1-201ENST00000263897 GDPD5Q8WTR4 605 aa18.12■□□□□ 0.49
USE1-201ENST00000263897 LINC01599Q8WXQ3 324 aa18.12■□□□□ 0.49
USE1-201ENST00000263897 FAM20AQ96MK3 541 aa18.12■□□□□ 0.49
USE1-201ENST00000263897 THEGQ9P2T0 379 aa18.12■□□□□ 0.49
USE1-201ENST00000263897 GINS2Q9Y248 185 aa18.12■□□□□ 0.49
USE1-201ENST00000263897 RPS6KA5O75582 802 aa18.11■□□□□ 0.49
USE1-201ENST00000263897 GCFC2P16383 781 aaKnown RBP18.11■□□□□ 0.49
USE1-201ENST00000263897 CRYBB1P53674 252 aaPredicted RBP18.11■□□□□ 0.49
USE1-201ENST00000263897 TMEM266Q2M3C6 531 aa18.11■□□□□ 0.49
USE1-201ENST00000263897 EPC2Q52LR7 807 aa18.11■□□□□ 0.49
USE1-201ENST00000263897 TJAP1Q5JTD0 557 aa18.11■□□□□ 0.49
USE1-201ENST00000263897 EFCAB12Q6NXP0 572 aa18.11■□□□□ 0.49
USE1-201ENST00000263897 CRIPAKQ8N1N5 446 aa18.11■□□□□ 0.49
USE1-201ENST00000263897 LINC01465Q8N7H1 131 aa18.11■□□□□ 0.49
USE1-201ENST00000263897 TMEM40Q8WWA1 233 aa18.11■□□□□ 0.49
USE1-201ENST00000263897 NAP1L4Q99733 375 aaKnown RBP18.11■□□□□ 0.49
USE1-201ENST00000263897 TMX1Q9H3N1 280 aa18.11■□□□□ 0.49
USE1-201ENST00000263897 KCNMB3Q9NPA1 279 aa18.11■□□□□ 0.49
USE1-201ENST00000263897 NOC2LQ9Y3T9 749 aaKnown RBP18.11■□□□□ 0.49
USE1-201ENST00000263897 CCNT1O60563 726 aaKnown RBP18.1■□□□□ 0.49
USE1-201ENST00000263897 GPR32O75388 356 aa18.1■□□□□ 0.49
USE1-201ENST00000263897 STBD1O95210 358 aa18.1■□□□□ 0.49
USE1-201ENST00000263897 VTNP04004 478 aa18.1■□□□□ 0.49
USE1-201ENST00000263897 TMOD1P28289 359 aa18.1■□□□□ 0.49
USE1-201ENST00000263897 KRT2P35908 639 aa18.1■□□□□ 0.49
USE1-201ENST00000263897 MRPS5P82675 430 aaKnown RBP18.1■□□□□ 0.49
USE1-201ENST00000263897 NFX1Q12986 1120 aaKnown RBP18.1■□□□□ 0.49
USE1-201ENST00000263897 NR5A1Q13285 461 aa18.1■□□□□ 0.49
USE1-201ENST00000263897 SKIV2LQ15477 1246 aaKnown RBP18.1■□□□□ 0.49
USE1-201ENST00000263897 TARBP2Q15633 366 aaKnown RBP18.1■□□□□ 0.49
USE1-201ENST00000263897 KIZQ2M2Z5 673 aa18.1■□□□□ 0.49
USE1-201ENST00000263897 C8orf34Q49A92 452 aa18.1■□□□□ 0.49
USE1-201ENST00000263897 XKR3Q5GH77 459 aa18.1■□□□□ 0.49
USE1-201ENST00000263897 EARS2Q5JPH6 523 aaKnown RBP18.1■□□□□ 0.49
USE1-201ENST00000263897 ODR4Q5SWX8 454 aa18.1■□□□□ 0.49
USE1-201ENST00000263897 TMEM192Q8IY95 271 aa18.1■□□□□ 0.49
USE1-201ENST00000263897 FIBCD1Q8N539 461 aa18.1■□□□□ 0.49
USE1-201ENST00000263897 SYMPKQ92797 1274 aaKnown RBP18.1■□□□□ 0.49
USE1-201ENST00000263897 TNFRSF25Q93038 417 aa18.1■□□□□ 0.49
USE1-201ENST00000263897 ZNF689Q96CS4 500 aaPredicted RBP18.1■□□□□ 0.49
USE1-201ENST00000263897 ASB2Q96Q27 587 aa18.1■□□□□ 0.49
USE1-201ENST00000263897 NIFKQ9BYG3 293 aaKnown RBP18.1■□□□□ 0.49
USE1-201ENST00000263897 RC3H2Q9HBD1 1191 aaKnown RBP18.1■□□□□ 0.49
USE1-201ENST00000263897 ERVK-5Q9HDB9 667 aa18.1■□□□□ 0.49
USE1-201ENST00000263897 LIMCH1Q9UPQ0 1083 aa18.1■□□□□ 0.49
USE1-201ENST00000263897 NCOR1O75376 2440 aa18.1■□□□□ 0.49
USE1-201ENST00000263897 TBX3O15119 743 aa18.09■□□□□ 0.49
USE1-201ENST00000263897 GPR182O15218 404 aa18.09■□□□□ 0.49
USE1-201ENST00000263897 JAK2O60674 1132 aa18.09■□□□□ 0.49
USE1-201ENST00000263897 DGKIO75912 1065 aa18.09■□□□□ 0.49
USE1-201ENST00000263897 CLCN3P51790 818 aa18.09■□□□□ 0.49
USE1-201ENST00000263897 PPP2R5CQ13362 524 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms