RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.88■□□□□ 0.93
TRIM47-201ENST00000254816 CCDC60Q8IWA6 550 aaPredicted RBP20.88■□□□□ 0.93
TRIM47-201ENST00000254816 SMAP1Q8IYB5 467 aaPredicted RBP20.88■□□□□ 0.93
TRIM47-201ENST00000254816 DAW1Q8N136 415 aa20.88■□□□□ 0.93
TRIM47-201ENST00000254816 RDM1Q8NG50 284 aa20.88■□□□□ 0.93
TRIM47-201ENST00000254816 KCND2Q9NZV8 630 aa20.88■□□□□ 0.93
TRIM47-201ENST00000254816 SLC45A1Q9Y2W3 748 aa20.88■□□□□ 0.93
TRIM47-201ENST00000254816 B4DLN1 442 aa20.87■□□□□ 0.93
TRIM47-201ENST00000254816 ZNF862O60290 1169 aa20.87■□□□□ 0.93
TRIM47-201ENST00000254816 GUCY2CP25092 1073 aa20.87■□□□□ 0.93
TRIM47-201ENST00000254816 ADKP55263 362 aaKnown RBP20.87■□□□□ 0.93
TRIM47-201ENST00000254816 MAPK7Q13164 816 aa20.87■□□□□ 0.93
TRIM47-201ENST00000254816 ZC2HC1CQ53FD0 456 aaPredicted RBP20.87■□□□□ 0.93
TRIM47-201ENST00000254816 FAM114A1Q8IWE2 563 aa20.87■□□□□ 0.93
TRIM47-201ENST00000254816 CCDC43Q96MW1 224 aaKnown RBP20.87■□□□□ 0.93
TRIM47-201ENST00000254816 PSAPP07602 524 aa20.87■□□□□ 0.93
TRIM47-201ENST00000254816 UBA1P22314 1058 aaKnown RBP20.87■□□□□ 0.93
TRIM47-201ENST00000254816 PTPN14Q15678 1187 aa20.87■□□□□ 0.93
TRIM47-201ENST00000254816 XKR9Q5GH70 373 aa20.87■□□□□ 0.93
TRIM47-201ENST00000254816 ABHD15Q6UXT9 468 aa20.87■□□□□ 0.93
TRIM47-201ENST00000254816 NYAP1Q6ZVC0 841 aa20.87■□□□□ 0.93
TRIM47-201ENST00000254816 ANO5Q75V66 913 aa20.87■□□□□ 0.93
TRIM47-201ENST00000254816 KSR1Q8IVT5 923 aa20.87■□□□□ 0.93
TRIM47-201ENST00000254816 CPLX3Q8WVH0 158 aa20.87■□□□□ 0.93
TRIM47-201ENST00000254816 IKZF4Q9H2S9 585 aa20.87■□□□□ 0.93
TRIM47-201ENST00000254816 OLFML3Q9NRN5 406 aa20.87■□□□□ 0.93
TRIM47-201ENST00000254816 ODF2LQ9ULJ1 636 aa20.87■□□□□ 0.93
TRIM47-201ENST00000254816 KIF20AO95235 890 aa20.86■□□□□ 0.93
TRIM47-201ENST00000254816 ZNF131P52739 623 aa20.86■□□□□ 0.93
TRIM47-201ENST00000254816 SHCBP1Q8NEM2 672 aa20.86■□□□□ 0.93
TRIM47-201ENST00000254816 GTF3C2Q8WUA4 911 aaPredicted RBP20.86■□□□□ 0.93
TRIM47-201ENST00000254816 FIZ1Q96SL8 496 aa20.86■□□□□ 0.93
TRIM47-201ENST00000254816 MAP7D2Q96T17 732 aa20.86■□□□□ 0.93
TRIM47-201ENST00000254816 LY6KQ17RY6 165 aa20.85■□□□□ 0.93
TRIM47-201ENST00000254816 KNOP1Q1ED39 458 aaKnown RBP20.85■□□□□ 0.93
TRIM47-201ENST00000254816 ODR4Q5SWX8 454 aa20.85■□□□□ 0.93
TRIM47-201ENST00000254816 LGALS16A8MUM7 142 aa20.85■□□□□ 0.93
TRIM47-201ENST00000254816 FKBP3Q00688 224 aaKnown RBP20.85■□□□□ 0.93
TRIM47-201ENST00000254816 RBL2Q08999 1139 aa20.85■□□□□ 0.93
TRIM47-201ENST00000254816 MIIPQ5JXC2 388 aa20.85■□□□□ 0.93
TRIM47-201ENST00000254816 E4F1Q66K89 784 aaPredicted RBP20.85■□□□□ 0.93
TRIM47-201ENST00000254816 FAM178BQ8IXR5 827 aa20.85■□□□□ 0.93
TRIM47-201ENST00000254816 ZNF507Q8TCN5 953 aa20.85■□□□□ 0.93
TRIM47-201ENST00000254816 NOC4LQ9BVI4 516 aaKnown RBP20.85■□□□□ 0.93
TRIM47-201ENST00000254816 ARIH2O95376 493 aa20.84■□□□□ 0.93
TRIM47-201ENST00000254816 MIS18BP1Q6P0N0 1132 aa20.84■□□□□ 0.93
TRIM47-201ENST00000254816 FBXO16Q8IX29 292 aaPredicted RBP20.84■□□□□ 0.93
TRIM47-201ENST00000254816 TC2NQ8N9U0 490 aa20.84■□□□□ 0.93
TRIM47-201ENST00000254816 GPRC5CQ9NQ84 441 aa20.84■□□□□ 0.93
TRIM47-201ENST00000254816 SYNGAP1Q96PV0 1343 aa20.84■□□□□ 0.93
TRIM47-201ENST00000254816 DCAF8L1A6NGE4 600 aa20.84■□□□□ 0.93
TRIM47-201ENST00000254816 CTIFO43310 598 aaKnown RBP20.84■□□□□ 0.93
TRIM47-201ENST00000254816 ECM2O94769 699 aaPredicted RBP20.84■□□□□ 0.93
TRIM47-201ENST00000254816 STBD1O95210 358 aa20.84■□□□□ 0.93
TRIM47-201ENST00000254816 FGFR1OPO95684 399 aaKnown RBP20.84■□□□□ 0.93
TRIM47-201ENST00000254816 SUPT20HL2P0C7V6 817 aa20.84■□□□□ 0.93
TRIM47-201ENST00000254816 ZNF157P51786 506 aaPredicted RBP20.84■□□□□ 0.93
TRIM47-201ENST00000254816 CCNA1P78396 465 aa20.84■□□□□ 0.93
TRIM47-201ENST00000254816 CCDC112Q8NEF3 446 aa20.84■□□□□ 0.93
TRIM47-201ENST00000254816 ATP6V0A1Q93050 837 aa20.84■□□□□ 0.93
TRIM47-201ENST00000254816 ANKEF1Q9NU02 776 aa20.84■□□□□ 0.93
TRIM47-201ENST00000254816 PAXBP1Q9Y5B6 917 aa20.84■□□□□ 0.93
TRIM47-201ENST00000254816 FARP2O94887 1054 aaPredicted RBP20.83■□□□□ 0.93
TRIM47-201ENST00000254816 ZNF720Q7Z2F6 126 aa20.83■□□□□ 0.93
TRIM47-201ENST00000254816 GCLCP48506 637 aaPredicted RBP20.83■□□□□ 0.92
TRIM47-201ENST00000254816 PRKCEQ02156 737 aa20.83■□□□□ 0.92
TRIM47-201ENST00000254816 BMT2Q1RMZ1 405 aa20.83■□□□□ 0.92
TRIM47-201ENST00000254816 FOXR2Q6PJQ5 311 aa20.83■□□□□ 0.92
TRIM47-201ENST00000254816 RASAL3Q86YV0 1011 aa20.83■□□□□ 0.92
TRIM47-201ENST00000254816 MPHOSPH6Q99547 160 aaKnown RBP20.83■□□□□ 0.92
TRIM47-201ENST00000254816 SEL1LQ9UBV2 794 aa20.83■□□□□ 0.92
TRIM47-201ENST00000254816 SEPT9Q9UHD8 586 aaPredicted RBP20.83■□□□□ 0.92
TRIM47-201ENST00000254816 ITIH6Q6UXX5 1313 aa20.82■□□□□ 0.92
TRIM47-201ENST00000254816 GGPS1O95749 300 aa20.82■□□□□ 0.92
TRIM47-201ENST00000254816 GYPCP04921 128 aa20.82■□□□□ 0.92
TRIM47-201ENST00000254816 ADORA2AP29274 412 aa20.82■□□□□ 0.92
TRIM47-201ENST00000254816 CASP14P31944 242 aa20.82■□□□□ 0.92
TRIM47-201ENST00000254816 ADAM9Q13443 819 aa20.82■□□□□ 0.92
TRIM47-201ENST00000254816 TMEM63BQ5T3F8 832 aa20.82■□□□□ 0.92
TRIM47-201ENST00000254816 PPFIBP1Q86W92 1011 aa20.82■□□□□ 0.92
TRIM47-201ENST00000254816 CEP170P1Q96L14 293 aa20.82■□□□□ 0.92
TRIM47-201ENST00000254816 PARK7Q99497 189 aaKnown RBP20.82■□□□□ 0.92
TRIM47-201ENST00000254816 MORF4L1Q9UBU8 362 aa20.82■□□□□ 0.92
TRIM47-201ENST00000254816 ZMYM2Q9UBW7 1377 aa20.82■□□□□ 0.92
TRIM47-201ENST00000254816 ATG7O95352 703 aa20.81■□□□□ 0.92
TRIM47-201ENST00000254816 NR2F2P24468 414 aa20.81■□□□□ 0.92
TRIM47-201ENST00000254816 KLK7P49862 253 aa20.81■□□□□ 0.92
TRIM47-201ENST00000254816 SOX10P56693 466 aa20.81■□□□□ 0.92
TRIM47-201ENST00000254816 CCDC40Q4G0X9 1142 aa20.81■□□□□ 0.92
TRIM47-201ENST00000254816 MTERF4Q7Z6M4 381 aaKnown RBP20.81■□□□□ 0.92
TRIM47-201ENST00000254816 PPP1R13BQ96KQ4 1090 aa20.81■□□□□ 0.92
TRIM47-201ENST00000254816 ZNF302Q9NR11 478 aa20.81■□□□□ 0.92
TRIM47-201ENST00000254816 TRAF3IP3Q9Y228 551 aa20.81■□□□□ 0.92
TRIM47-201ENST00000254816 IGSF9BQ9UPX0 1349 aa20.81■□□□□ 0.92
TRIM47-201ENST00000254816 GSTTP1A0A1W2PQM5 241 aa20.81■□□□□ 0.92
TRIM47-201ENST00000254816 AKR1B15C9JRZ8 316 aaPredicted RBP20.81■□□□□ 0.92
TRIM47-201ENST00000254816 RNF225M0QZC1 329 aaPredicted RBP20.81■□□□□ 0.92
TRIM47-201ENST00000254816 CLIC2O15247 247 aa20.81■□□□□ 0.92
TRIM47-201ENST00000254816 ATP4AP20648 1035 aa20.81■□□□□ 0.92
TRIM47-201ENST00000254816 DNM2P50570 870 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms