RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 NEK9Q8TD19 979 aa23.88■■□□□ 1.41
NEDD8-201ENST00000250495 BBXQ8WY36 941 aaPredicted RBP23.88■■□□□ 1.41
NEDD8-201ENST00000250495 PABPC5Q96DU9 382 aaKnown RBP23.88■■□□□ 1.41
NEDD8-201ENST00000250495 UIMC1Q96RL1 719 aa23.88■■□□□ 1.41
NEDD8-201ENST00000250495 PCDHA10Q9Y5I2 948 aa23.88■■□□□ 1.41
NEDD8-201ENST00000250495 MAFBQ9Y5Q3 323 aaPredicted RBP23.88■■□□□ 1.41
NEDD8-201ENST00000250495 MYH9P35579 1960 aaKnown RBP23.88■■□□□ 1.41
NEDD8-201ENST00000250495 MYO7AQ13402 2215 aa23.87■■□□□ 1.41
NEDD8-201ENST00000250495 ATP4AP20648 1035 aa23.87■■□□□ 1.41
NEDD8-201ENST00000250495 PTCRAQ6ISU1 281 aaPredicted RBP23.87■■□□□ 1.41
NEDD8-201ENST00000250495 RNF216Q9NWF9 866 aaPredicted RBP23.87■■□□□ 1.41
NEDD8-201ENST00000250495 LRFN2Q9ULH4 789 aa23.87■■□□□ 1.41
NEDD8-201ENST00000250495 GINS2Q9Y248 185 aa23.87■■□□□ 1.41
NEDD8-201ENST00000250495 EVPLQ92817 2033 aa23.87■■□□□ 1.41
NEDD8-201ENST00000250495 GRM6O15303 877 aa23.86■■□□□ 1.41
NEDD8-201ENST00000250495 RPS6KA5O75582 802 aa23.86■■□□□ 1.41
NEDD8-201ENST00000250495 CCT2P78371 535 aaKnown RBP23.86■■□□□ 1.41
NEDD8-201ENST00000250495 NAALADL2Q58DX5 795 aa23.86■■□□□ 1.41
NEDD8-201ENST00000250495 RUFY3Q7L099 469 aa23.86■■□□□ 1.41
NEDD8-201ENST00000250495 SH3GLB2Q9NR46 395 aa23.86■■□□□ 1.41
NEDD8-201ENST00000250495 CEP131Q9UPN4 1083 aa23.86■■□□□ 1.41
NEDD8-201ENST00000250495 GRXCR2A6NFK2 248 aa23.85■■□□□ 1.41
NEDD8-201ENST00000250495 ZBTB42B2RXF5 422 aa23.85■■□□□ 1.41
NEDD8-201ENST00000250495 USP11P51784 963 aa23.85■■□□□ 1.41
NEDD8-201ENST00000250495 COL19A1Q14993 1142 aa23.85■■□□□ 1.41
NEDD8-201ENST00000250495 TMEM266Q2M3C6 531 aa23.85■■□□□ 1.41
NEDD8-201ENST00000250495 EP400NLQ6ZTU2 488 aa23.85■■□□□ 1.41
NEDD8-201ENST00000250495 FAM178BQ8IXR5 827 aa23.85■■□□□ 1.41
NEDD8-201ENST00000250495 TRIM22Q8IYM9 498 aa23.85■■□□□ 1.41
NEDD8-201ENST00000250495 RASGRP4Q8TDF6 673 aa23.85■■□□□ 1.41
NEDD8-201ENST00000250495 P2RX5Q93086 422 aa23.85■■□□□ 1.41
NEDD8-201ENST00000250495 TMX1Q9H3N1 280 aa23.85■■□□□ 1.41
NEDD8-201ENST00000250495 EPHX3Q9H6B9 360 aa23.85■■□□□ 1.41
NEDD8-201ENST00000250495 ZSWIM6Q9HCJ5 1215 aa23.85■■□□□ 1.41
NEDD8-201ENST00000250495 VPS54Q9P1Q0 977 aa23.85■■□□□ 1.41
NEDD8-201ENST00000250495 FAM50BQ9Y247 325 aa23.85■■□□□ 1.41
NEDD8-201ENST00000250495 NOC2LQ9Y3T9 749 aaKnown RBP23.85■■□□□ 1.41
NEDD8-201ENST00000250495 SAMM50Q9Y512 469 aa23.85■■□□□ 1.41
NEDD8-201ENST00000250495 H3BQ06 376 aaPredicted RBP23.84■■□□□ 1.41
NEDD8-201ENST00000250495 GPR182O15218 404 aa23.84■■□□□ 1.41
NEDD8-201ENST00000250495 PPFIA3O75145 1194 aa23.84■■□□□ 1.41
NEDD8-201ENST00000250495 SARSP49591 514 aaKnown RBP23.84■■□□□ 1.41
NEDD8-201ENST00000250495 NLRP5P59047 1200 aa23.84■■□□□ 1.41
NEDD8-201ENST00000250495 CDHR5Q9HBB8 845 aa23.84■■□□□ 1.41
NEDD8-201ENST00000250495 ERVK-5Q9HDB9 667 aa23.84■■□□□ 1.41
NEDD8-201ENST00000250495 GABBR1Q9UBS5 961 aa23.84■■□□□ 1.41
NEDD8-201ENST00000250495 PLAGL2Q9UPG8 496 aa23.84■■□□□ 1.41
NEDD8-201ENST00000250495 PCDHB7Q9Y5E2 793 aa23.84■■□□□ 1.41
NEDD8-201ENST00000250495 CYP46A1Q9Y6A2 500 aa23.84■■□□□ 1.41
NEDD8-201ENST00000250495 MRPL42Q9Y6G3 142 aaKnown RBP23.84■■□□□ 1.41
NEDD8-201ENST00000250495 MAGEB2O15479 319 aa23.83■■□□□ 1.41
NEDD8-201ENST00000250495 C22orf31O95567 290 aa23.83■■□□□ 1.41
NEDD8-201ENST00000250495 IL9P15248 144 aa23.83■■□□□ 1.41
NEDD8-201ENST00000250495 CRYBB1P53674 252 aaPredicted RBP23.83■■□□□ 1.41
NEDD8-201ENST00000250495 SSRP1Q08945 709 aaKnown RBP23.83■■□□□ 1.41
NEDD8-201ENST00000250495 TRMT1LQ7Z2T5 733 aaKnown RBP23.83■■□□□ 1.41
NEDD8-201ENST00000250495 GJD3Q8N144 294 aa23.83■■□□□ 1.41
NEDD8-201ENST00000250495 METTL13Q8N6R0 699 aa23.83■■□□□ 1.41
NEDD8-201ENST00000250495 LENG9Q96B70 501 aa23.83■■□□□ 1.41
NEDD8-201ENST00000250495 FAM167AQ96KS9 214 aa23.83■■□□□ 1.41
NEDD8-201ENST00000250495 C22orf23Q9BZE7 217 aa23.83■■□□□ 1.41
NEDD8-201ENST00000250495 NCOA5Q9HCD5 579 aaKnown RBP23.83■■□□□ 1.41
NEDD8-201ENST00000250495 C1orf112Q9NSG2 853 aa23.83■■□□□ 1.41
NEDD8-201ENST00000250495 NRBP2Q9NSY0 501 aa23.83■■□□□ 1.41
NEDD8-201ENST00000250495 CLDND1Q9NY35 253 aa23.83■■□□□ 1.41
NEDD8-201ENST00000250495 ST3GAL5Q9UNP4 418 aa23.83■■□□□ 1.41
NEDD8-201ENST00000250495 DENND3A2RUS2 1198 aa23.82■■□□□ 1.4
NEDD8-201ENST00000250495 WDR64B1ANS9 1081 aa23.82■■□□□ 1.4
NEDD8-201ENST00000250495 MMP1P03956 469 aa23.82■■□□□ 1.4
NEDD8-201ENST00000250495 PAN2Q504Q3 1202 aaKnown RBP23.82■■□□□ 1.4
NEDD8-201ENST00000250495 ZNF274Q96GC6 653 aaPredicted RBP23.82■■□□□ 1.4
NEDD8-201ENST00000250495 ALG13Q9NP73 1137 aaKnown RBP23.82■■□□□ 1.4
NEDD8-201ENST00000250495 RGS18Q9NS28 235 aa23.82■■□□□ 1.4
NEDD8-201ENST00000250495 CPLX1O14810 134 aa23.81■■□□□ 1.4
NEDD8-201ENST00000250495 TMOD1P28289 359 aa23.81■■□□□ 1.4
NEDD8-201ENST00000250495 TOB2Q14106 344 aaPredicted RBP23.81■■□□□ 1.4
NEDD8-201ENST00000250495 KIZQ2M2Z5 673 aa23.81■■□□□ 1.4
NEDD8-201ENST00000250495 SLC24A5Q71RS6 500 aa23.81■■□□□ 1.4
NEDD8-201ENST00000250495 ZNF710Q8N1W2 664 aa23.81■■□□□ 1.4
NEDD8-201ENST00000250495 TMEM40Q8WWA1 233 aa23.81■■□□□ 1.4
NEDD8-201ENST00000250495 PPP2R3CQ969Q6 453 aa23.81■■□□□ 1.4
NEDD8-201ENST00000250495 RIT2Q99578 217 aa23.81■■□□□ 1.4
NEDD8-201ENST00000250495 ADAM2Q99965 735 aa23.81■■□□□ 1.4
NEDD8-201ENST00000250495 TM6SF1Q9BZW5 370 aa23.81■■□□□ 1.4
NEDD8-201ENST00000250495 CD320Q9NPF0 282 aa23.81■■□□□ 1.4
NEDD8-201ENST00000250495 DISC1Q9NRI5 854 aa23.81■■□□□ 1.4
NEDD8-201ENST00000250495 MSH4O15457 936 aa23.8■■□□□ 1.4
NEDD8-201ENST00000250495 CTC1Q2NKJ3 1217 aa23.8■■□□□ 1.4
NEDD8-201ENST00000250495 CPLX2Q6PUV4 134 aaKnown RBP23.8■■□□□ 1.4
NEDD8-201ENST00000250495 OSMRQ99650 979 aa23.8■■□□□ 1.4
NEDD8-201ENST00000250495 PCDHA4Q9UN74 947 aa23.8■■□□□ 1.4
NEDD8-201ENST00000250495 PI4K2BG5E9Z4 385 aa23.79■■□□□ 1.4
NEDD8-201ENST00000250495 EDIL3O43854 480 aa23.79■■□□□ 1.4
NEDD8-201ENST00000250495 MGEA5O60502 916 aa23.79■■□□□ 1.4
NEDD8-201ENST00000250495 GAS7O60861 476 aa23.79■■□□□ 1.4
NEDD8-201ENST00000250495 GPR32O75388 356 aa23.79■■□□□ 1.4
NEDD8-201ENST00000250495 DEXIO95424 95 aa23.79■■□□□ 1.4
NEDD8-201ENST00000250495 VTNP04004 478 aa23.79■■□□□ 1.4
NEDD8-201ENST00000250495 IBSPP21815 317 aaPredicted RBP23.79■■□□□ 1.4
NEDD8-201ENST00000250495 SFNP31947 248 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms