RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 USP38Q8NB14 1042 aa27.34■■□□□ 1.97
SDF2L1-201ENST00000248958 DBF4BQ8NFT6 615 aa27.34■■□□□ 1.97
SDF2L1-201ENST00000248958 MSRAQ9UJ68 235 aa27.34■■□□□ 1.97
SDF2L1-201ENST00000248958 WNT7AO00755 349 aa27.33■■□□□ 1.97
SDF2L1-201ENST00000248958 TMOD1P28289 359 aa27.33■■□□□ 1.97
SDF2L1-201ENST00000248958 TXKP42681 527 aa27.33■■□□□ 1.97
SDF2L1-201ENST00000248958 NCAPH2Q6IBW4 605 aa27.33■■□□□ 1.97
SDF2L1-201ENST00000248958 ZNF710Q8N1W2 664 aa27.33■■□□□ 1.97
SDF2L1-201ENST00000248958 BANK1Q8NDB2 785 aa27.33■■□□□ 1.97
SDF2L1-201ENST00000248958 NEK9Q8TD19 979 aa27.33■■□□□ 1.97
SDF2L1-201ENST00000248958 ZBTB10Q96DT7 871 aa27.33■■□□□ 1.97
SDF2L1-201ENST00000248958 SEPT9Q9UHD8 586 aaPredicted RBP27.33■■□□□ 1.97
SDF2L1-201ENST00000248958 KDM3AQ9Y4C1 1321 aa27.33■■□□□ 1.97
SDF2L1-201ENST00000248958 GBF1Q92538 1859 aa27.32■■□□□ 1.96
SDF2L1-201ENST00000248958 DNAJB2P25686 324 aa27.32■■□□□ 1.96
SDF2L1-201ENST00000248958 WDR5P61964 334 aaKnown RBP27.32■■□□□ 1.96
SDF2L1-201ENST00000248958 LARP1BQ659C4 914 aaKnown RBP27.32■■□□□ 1.96
SDF2L1-201ENST00000248958 FAM43BQ6ZT52 329 aaPredicted RBP27.32■■□□□ 1.96
SDF2L1-201ENST00000248958 PBX4Q9BYU1 374 aa27.32■■□□□ 1.96
SDF2L1-201ENST00000248958 CELF4Q9BZC1 486 aaKnown RBP27.32■■□□□ 1.96
SDF2L1-201ENST00000248958 MICAL3Q7RTP6 2002 aa27.32■■□□□ 1.96
SDF2L1-201ENST00000248958 GRXCR1A8MXD5 290 aa27.31■■□□□ 1.96
SDF2L1-201ENST00000248958 TARBP2Q15633 366 aaKnown RBP27.31■■□□□ 1.96
SDF2L1-201ENST00000248958 ZNF174Q15697 407 aa27.31■■□□□ 1.96
SDF2L1-201ENST00000248958 MCTP1Q6DN14 999 aa27.31■■□□□ 1.96
SDF2L1-201ENST00000248958 C4orf19Q8IY42 314 aa27.31■■□□□ 1.96
SDF2L1-201ENST00000248958 KIAA0319LQ8IZA0 1049 aa27.31■■□□□ 1.96
SDF2L1-201ENST00000248958 DEFB123Q8N688 67 aa27.31■■□□□ 1.96
SDF2L1-201ENST00000248958 INTS4Q96HW7 963 aaKnown RBP27.31■■□□□ 1.96
SDF2L1-201ENST00000248958 IFIH1Q9BYX4 1025 aaKnown RBP27.31■■□□□ 1.96
SDF2L1-201ENST00000248958 PPME1Q9Y570 386 aa27.31■■□□□ 1.96
SDF2L1-201ENST00000248958 LOXHD1Q8IVV2 1947 aa27.3■■□□□ 1.96
SDF2L1-201ENST00000248958 K7ELQ4 463 aaPredicted RBP27.3■■□□□ 1.96
SDF2L1-201ENST00000248958 STBD1O95210 358 aa27.3■■□□□ 1.96
SDF2L1-201ENST00000248958 OR52Z1P0C646 297 aa27.3■■□□□ 1.96
SDF2L1-201ENST00000248958 TBC1D8BQ0IIM8 1120 aa27.3■■□□□ 1.96
SDF2L1-201ENST00000248958 FBXO47Q5MNV8 452 aa27.3■■□□□ 1.96
SDF2L1-201ENST00000248958 EFCAB12Q6NXP0 572 aa27.3■■□□□ 1.96
SDF2L1-201ENST00000248958 TSHZ1Q6ZSZ6 1077 aa27.3■■□□□ 1.96
SDF2L1-201ENST00000248958 METTL13Q8N6R0 699 aa27.3■■□□□ 1.96
SDF2L1-201ENST00000248958 SNX21Q969T3 373 aa27.3■■□□□ 1.96
SDF2L1-201ENST00000248958 TIFAQ96CG3 184 aa27.3■■□□□ 1.96
SDF2L1-201ENST00000248958 MAP7D2Q96T17 732 aa27.3■■□□□ 1.96
SDF2L1-201ENST00000248958 TMEM60Q9H2L4 133 aa27.3■■□□□ 1.96
SDF2L1-201ENST00000248958 ZSWIM4Q9H7M6 989 aa27.3■■□□□ 1.96
SDF2L1-201ENST00000248958 PCDHA11Q9Y5I1 949 aa27.3■■□□□ 1.96
SDF2L1-201ENST00000248958 DDX11L8A8MPP1 907 aa27.29■■□□□ 1.96
SDF2L1-201ENST00000248958 GHRP10912 638 aa27.29■■□□□ 1.96
SDF2L1-201ENST00000248958 PDCP20941 246 aa27.29■■□□□ 1.96
SDF2L1-201ENST00000248958 LPIN1Q14693 890 aa27.29■■□□□ 1.96
SDF2L1-201ENST00000248958 MTERF2Q49AM1 385 aa27.29■■□□□ 1.96
SDF2L1-201ENST00000248958 RILPL1Q5EBL4 403 aa27.29■■□□□ 1.96
SDF2L1-201ENST00000248958 OTUD6AQ7L8S5 288 aa27.29■■□□□ 1.96
SDF2L1-201ENST00000248958 EXOC8Q8IYI6 725 aa27.29■■□□□ 1.96
SDF2L1-201ENST00000248958 JPH2Q9BR39 696 aaPredicted RBP27.29■■□□□ 1.96
SDF2L1-201ENST00000248958 LXNQ9BS40 222 aa27.29■■□□□ 1.96
SDF2L1-201ENST00000248958 PTPRSQ13332 1948 aa27.28■■□□□ 1.96
SDF2L1-201ENST00000248958 TCTN1Q2MV58 587 aa27.28■■□□□ 1.96
SDF2L1-201ENST00000248958 ODR4Q5SWX8 454 aa27.28■■□□□ 1.96
SDF2L1-201ENST00000248958 LINC01465Q8N7H1 131 aa27.28■■□□□ 1.96
SDF2L1-201ENST00000248958 DYDC2Q96IM9 177 aa27.28■■□□□ 1.96
SDF2L1-201ENST00000248958 EIF2AK1Q9BQI3 630 aaKnown RBP27.28■■□□□ 1.96
SDF2L1-201ENST00000248958 AMHP03971 560 aa27.27■■□□□ 1.96
SDF2L1-201ENST00000248958 TMEM62Q0P6H9 643 aa27.27■■□□□ 1.96
SDF2L1-201ENST00000248958 MKRN4PQ13434 485 aaPredicted RBP27.27■■□□□ 1.96
SDF2L1-201ENST00000248958 TMEM266Q2M3C6 531 aa27.27■■□□□ 1.96
SDF2L1-201ENST00000248958 ANO5Q75V66 913 aa27.27■■□□□ 1.96
SDF2L1-201ENST00000248958 HERC6Q8IVU3 1022 aa27.27■■□□□ 1.96
SDF2L1-201ENST00000248958 OSBPL7Q9BZF2 842 aa27.27■■□□□ 1.96
SDF2L1-201ENST00000248958 LAD1O00515 517 aa27.26■■□□□ 1.95
SDF2L1-201ENST00000248958 SLITRK3O94933 977 aa27.26■■□□□ 1.95
SDF2L1-201ENST00000248958 PBX2P40425 430 aa27.26■■□□□ 1.95
SDF2L1-201ENST00000248958 TOB1P50616 345 aaPredicted RBP27.26■■□□□ 1.95
SDF2L1-201ENST00000248958 CRYBB1P53674 252 aaPredicted RBP27.26■■□□□ 1.95
SDF2L1-201ENST00000248958 CDC42EP1Q00587 391 aa27.26■■□□□ 1.95
SDF2L1-201ENST00000248958 Q7L0L9 218 aa27.26■■□□□ 1.95
SDF2L1-201ENST00000248958 CEP89Q96ST8 783 aa27.26■■□□□ 1.95
SDF2L1-201ENST00000248958 HSD17B14Q9BPX1 270 aa27.26■■□□□ 1.95
SDF2L1-201ENST00000248958 FTHL17Q9BXU8 183 aa27.26■■□□□ 1.95
SDF2L1-201ENST00000248958 SEMA6BQ9H3T3 888 aa27.26■■□□□ 1.95
SDF2L1-201ENST00000248958 CYP26B1Q9NR63 512 aa27.26■■□□□ 1.95
SDF2L1-201ENST00000248958 MTMR10Q9NXD2 777 aa27.26■■□□□ 1.95
SDF2L1-201ENST00000248958 RGL1Q9NZL6 768 aa27.26■■□□□ 1.95
SDF2L1-201ENST00000248958 LYPLA2O95372 231 aa27.25■■□□□ 1.95
SDF2L1-201ENST00000248958 YWHABP31946 246 aaKnown RBP27.25■■□□□ 1.95
SDF2L1-201ENST00000248958 DNM2P50570 870 aa27.25■■□□□ 1.95
SDF2L1-201ENST00000248958 CLCN3P51790 818 aa27.25■■□□□ 1.95
SDF2L1-201ENST00000248958 CTTNQ14247 550 aaKnown RBP27.25■■□□□ 1.95
SDF2L1-201ENST00000248958 TPH2Q8IWU9 490 aa27.25■■□□□ 1.95
SDF2L1-201ENST00000248958 SUGCTQ9HAC7 445 aa27.25■■□□□ 1.95
SDF2L1-201ENST00000248958 SLC28A3Q9HAS3 691 aa27.25■■□□□ 1.95
SDF2L1-201ENST00000248958 AKT3Q9Y243 479 aa27.25■■□□□ 1.95
SDF2L1-201ENST00000248958 IGKV6-21A0A0C4DH24 114 aa27.24■■□□□ 1.95
SDF2L1-201ENST00000248958 MAFO75444 373 aaPredicted RBP27.24■■□□□ 1.95
SDF2L1-201ENST00000248958 TECP42680 631 aa27.24■■□□□ 1.95
SDF2L1-201ENST00000248958 RABGGTBP53611 331 aa27.24■■□□□ 1.95
SDF2L1-201ENST00000248958 DEFB103AP81534 67 aa27.24■■□□□ 1.95
SDF2L1-201ENST00000248958 CYP4A11Q02928 519 aa27.24■■□□□ 1.95
SDF2L1-201ENST00000248958 LRRC71Q8N4P6 559 aa27.24■■□□□ 1.95
SDF2L1-201ENST00000248958 C4orf32Q8N8J7 132 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms