RNA–Protein interactions for RNA: ENST00000245441.9

NIN-201, Transcript of ninein, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NIN, Length 10,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-201ENST00000245441 RASA4O43374 803 aa12.3□□□□□ -0.44
NIN-201ENST00000245441 AP3B2Q13367 1082 aa12.3□□□□□ -0.44
NIN-201ENST00000245441 LRRC37BQ96QE4 947 aa12.3□□□□□ -0.44
NIN-201ENST00000245441 TRIM55Q9BYV6 548 aa12.3□□□□□ -0.44
NIN-201ENST00000245441 CACNB1Q02641 598 aaPredicted RBP12.3□□□□□ -0.44
NIN-201ENST00000245441 TMEM60Q9H2L4 133 aa12.3□□□□□ -0.44
NIN-201ENST00000245441 CC2D1AQ6P1N0 951 aaPredicted RBP12.3□□□□□ -0.44
NIN-201ENST00000245441 NBPF10Q6P3W6 841 aaKnown RBP12.3□□□□□ -0.44
NIN-201ENST00000245441 ZNF449Q6P9G9 518 aa12.3□□□□□ -0.44
NIN-201ENST00000245441 PCIF1Q9H4Z3 704 aa12.3□□□□□ -0.44
NIN-201ENST00000245441 PSMA2P25787 234 aa12.3□□□□□ -0.44
NIN-201ENST00000245441 CLEC17AQ6ZS10 378 aa12.3□□□□□ -0.44
NIN-201ENST00000245441 CFAP36Q96G28 342 aa12.3□□□□□ -0.44
NIN-201ENST00000245441 BSDC1Q9NW68 430 aaPredicted RBP12.3□□□□□ -0.44
NIN-201ENST00000245441 CPSF3Q9UKF6 684 aaKnown RBP12.3□□□□□ -0.44
NIN-201ENST00000245441 NCF2P19878 526 aaPredicted RBP12.3□□□□□ -0.44
NIN-201ENST00000245441 EPM2AIP1Q7L775 607 aaPredicted RBP12.3□□□□□ -0.44
NIN-201ENST00000245441 COA7Q96BR5 231 aa12.3□□□□□ -0.44
NIN-201ENST00000245441 OSBPL9Q96SU4 736 aa12.3□□□□□ -0.44
NIN-201ENST00000245441 LRRC4Q9HBW1 653 aa12.3□□□□□ -0.44
NIN-201ENST00000245441 GGCXP38435 758 aa12.3□□□□□ -0.44
NIN-201ENST00000245441 LLGL1Q15334 1064 aa12.3□□□□□ -0.44
NIN-201ENST00000245441 PI16Q6UXB8 463 aa12.3□□□□□ -0.44
NIN-201ENST00000245441 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.3□□□□□ -0.44
NIN-201ENST00000245441 ABCC3O15438 1527 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 USP17L8P0C7I0 530 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 RFX1P22670 979 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 ARL4CP56559 192 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 ZC3H18Q86VM9 953 aaKnown RBP12.29□□□□□ -0.44
NIN-201ENST00000245441 AIFM3Q96NN9 605 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 ZBTB1Q9Y2K1 713 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 K7ERI5 159 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 GYG2O15488 501 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 KRT38O76015 456 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 CALB1P05937 261 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 SLC16A2P36021 539 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 SIX6OS1Q8N1H7 587 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 TARSL2A2RTX5 802 aaKnown RBP12.29□□□□□ -0.44
NIN-201ENST00000245441 CHEK2O96017 543 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 KRT10P13645 584 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 FAM8A1Q9UBU6 413 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 TRIM33Q9UPN9 1127 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 USP17L3A6NCW0 530 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 USP17L4A6NCW7 530 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 ARMCX2Q7L311 632 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 USP17L1Q7RTZ2 530 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 MTA3Q9BTC8 594 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 FAM96AQ9H5X1 160 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 NXF1Q9UBU9 619 aaKnown RBP12.29□□□□□ -0.44
NIN-201ENST00000245441 ANAPC7Q9UJX3 599 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 STRIP2Q9ULQ0 834 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 MYO1CO00159 1063 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 JAK3P52333 1124 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 TRIP13Q15645 432 aaPredicted RBP12.29□□□□□ -0.44
NIN-201ENST00000245441 DCPSQ96C86 337 aaKnown RBP12.29□□□□□ -0.44
NIN-201ENST00000245441 GSTA4O15217 222 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 APBA3O96018 575 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 PAMP19021 973 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 TAF1BQ53T94 588 aaPredicted RBP12.29□□□□□ -0.44
NIN-201ENST00000245441 USPL1Q5W0Q7 1092 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 VPS39Q96JC1 886 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 FGD4Q96M96 766 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 STRBPQ96SI9 672 aaKnown RBP12.29□□□□□ -0.44
NIN-201ENST00000245441 INTUQ9ULD6 942 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 KIAA1210Q9ULL0 1709 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 TADA3O75528 432 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 METTL23Q86XA0 190 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 BHMT2Q9H2M3 363 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 DPY19L2Q6NUT2 758 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 SEC31BQ9NQW1 1179 aa12.29□□□□□ -0.44
NIN-201ENST00000245441 SASH1O94885 1247 aa12.28□□□□□ -0.44
NIN-201ENST00000245441 ZRANB2O95218 330 aaKnown RBP eCLIP12.28□□□□□ -0.44
NIN-201ENST00000245441 FMR1NBQ8N0W7 255 aaPredicted RBP12.28□□□□□ -0.44
NIN-201ENST00000245441 SPAG7O75391 227 aa12.28□□□□□ -0.44
NIN-201ENST00000245441 NR3C1P04150 777 aa12.28□□□□□ -0.44
NIN-201ENST00000245441 CDK8P49336 464 aa12.28□□□□□ -0.44
NIN-201ENST00000245441 OCRLQ01968 901 aa12.28□□□□□ -0.44
NIN-201ENST00000245441 BBS9Q3SYG4 887 aa12.28□□□□□ -0.44
NIN-201ENST00000245441 WDR75Q8IWA0 830 aaKnown RBP12.28□□□□□ -0.44
NIN-201ENST00000245441 TRPA1O75762 1119 aa12.28□□□□□ -0.44
NIN-201ENST00000245441 UBXN2AP68543 259 aa12.28□□□□□ -0.44
NIN-201ENST00000245441 PFKFB3Q16875 520 aaPredicted RBP12.28□□□□□ -0.44
NIN-201ENST00000245441 TTC13Q8NBP0 860 aa12.28□□□□□ -0.44
NIN-201ENST00000245441 EIF2AQ9BY44 585 aaKnown RBP12.28□□□□□ -0.44
NIN-201ENST00000245441 MYH7P12883 1935 aa12.28□□□□□ -0.44
NIN-201ENST00000245441 GRAMD1BQ3KR37 738 aa12.28□□□□□ -0.44
NIN-201ENST00000245441 DPP9Q86TI2 863 aa12.28□□□□□ -0.44
NIN-201ENST00000245441 ABI1Q8IZP0 508 aa12.28□□□□□ -0.44
NIN-201ENST00000245441 WDR91A4D1P6 747 aa12.28□□□□□ -0.44
NIN-201ENST00000245441 CHUKO15111 745 aa12.28□□□□□ -0.44
NIN-201ENST00000245441 TBC1D9BQ66K14 1250 aa12.28□□□□□ -0.44
NIN-201ENST00000245441 FAM160B2Q86V87 743 aa12.28□□□□□ -0.44
NIN-201ENST00000245441 GDAQ9Y2T3 454 aa12.28□□□□□ -0.44
NIN-201ENST00000245441 LDHAP00338 332 aaKnown RBP12.28□□□□□ -0.44
NIN-201ENST00000245441 MYLK4Q86YV6 388 aaPredicted RBP12.28□□□□□ -0.44
NIN-201ENST00000245441 RPF1Q9H9Y2 349 aaKnown RBP12.28□□□□□ -0.44
NIN-201ENST00000245441 MED14O60244 1454 aa12.28□□□□□ -0.44
NIN-201ENST00000245441 MDM2Q00987 491 aaPredicted RBP12.28□□□□□ -0.44
NIN-201ENST00000245441 CDR2Q01850 454 aa12.28□□□□□ -0.44
NIN-201ENST00000245441 PPP1R18Q6NYC8 613 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms